RNA–Protein interactions for RNA: ENST00000426870.1

LINC01953-201, Transcript of long intergenic non-protein coding RNA 1953, humanhuman

TSL 5 BASIC

Gene LINC01953, Length 717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01953-201ENST00000426870 NUP35Q8NFH5 326 aa1.35□□□□□ -2.19
LINC01953-201ENST00000426870 MRPL30Q8TCC3 161 aaKnown RBP1.35□□□□□ -2.19
LINC01953-201ENST00000426870 SCGB1C1Q8TD33 95 aa1.35□□□□□ -2.19
LINC01953-201ENST00000426870 RNASE6Q93091 150 aaKnown RBP1.35□□□□□ -2.19
LINC01953-201ENST00000426870 MIEN1Q9BRT3 115 aa1.35□□□□□ -2.19
LINC01953-201ENST00000426870 VAMP8Q9BV40 100 aa1.35□□□□□ -2.19
LINC01953-201ENST00000426870 TMEM133Q9H2Q1 129 aa1.35□□□□□ -2.19
LINC01953-201ENST00000426870 FKBP11Q9NYL4 201 aa1.35□□□□□ -2.19
LINC01953-201ENST00000426870 TAAR3PQ9P1P4 343 aa1.35□□□□□ -2.19
LINC01953-201ENST00000426870 CKLFQ9UBR5 152 aa1.35□□□□□ -2.19
LINC01953-201ENST00000426870 FIS1Q9Y3D6 152 aa1.35□□□□□ -2.19
LINC01953-201ENST00000426870 CC2D2AQ9P2K1 1620 aa1.35□□□□□ -2.19
LINC01953-201ENST00000426870 TCOF1Q13428 1488 aaKnown RBP1.35□□□□□ -2.19
LINC01953-201ENST00000426870 QRICH2Q9H0J4 1663 aa1.35□□□□□ -2.19
LINC01953-201ENST00000426870 FER1L6Q2WGJ9 1857 aa1.35□□□□□ -2.19
LINC01953-201ENST00000426870 ABCA10Q8WWZ4 1543 aa1.35□□□□□ -2.19
LINC01953-201ENST00000426870 ABCA3Q99758 1704 aa1.35□□□□□ -2.19
LINC01953-201ENST00000426870 NCKAP5O14513 1909 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 ATG2AQ2TAZ0 1938 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 LAMB2P55268 1798 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 NAIPQ13075 1403 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 RRBP1Q9P2E9 1410 aaKnown RBP1.34□□□□□ -2.19
LINC01953-201ENST00000426870 CR1P17927 2039 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 TRBV24-1A0A075B6N3 115 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 TRAV27A0A087WT01 109 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 TRGV10A0A0A0MS01 117 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 IGKV1-12A0A0C4DH73 117 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 GRIFINA4D1Z8 144 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 OR2T8A6NH00 312 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 TMEM250H0YL14 139 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 BUB1B-PAK6H3BSN5 160 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 UBE2L6O14933 153 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 IGKV1D-12P01611 117 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 APOC3P02656 99 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 MT-ATP8P03928 68 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 ZNF705DP0CH99 300 aaPredicted RBP1.34□□□□□ -2.19
LINC01953-201ENST00000426870 IFITM1P13164 125 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 CA7P43166 264 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 ZNF80P51504 273 aaPredicted RBP1.34□□□□□ -2.19
LINC01953-201ENST00000426870 TMBIM6P55061 237 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 SNRPD3P62318 126 aaKnown RBP1.34□□□□□ -2.19
LINC01953-201ENST00000426870 GNGT1P63211 74 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 DEFA5Q01523 94 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 FOXF1Q12946 379 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 SPANXN3Q5MJ09 141 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 C9orf153Q5TBE3 101 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 C1orf140Q5VVS0 124 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 FOXI2Q6ZQN5 318 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 LCA10Q71F78 164 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 C10orf126Q8N4M7 172 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 TTC9CQ8N5M4 171 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 LINC00311Q8N616 119 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 OR51H1Q8NH63 302 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 OR4A5Q8NH83 315 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 LCN9Q8WX39 176 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 H1FXQ92522 213 aaKnown RBP1.34□□□□□ -2.19
LINC01953-201ENST00000426870 MAL2Q969L2 176 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 TOMM6Q96B49 74 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 DPH3Q96FX2 82 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 SEC11CQ9BY50 192 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 REG4Q9BYZ8 158 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 IMUPQ9GZP8 106 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 TMEM191AQ9H0A3 160 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 ATG5Q9H1Y0 275 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 SAR1AQ9NR31 198 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 TAS2R8Q9NYW2 309 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 MRPS16Q9Y3D3 137 aaKnown RBP1.34□□□□□ -2.19
LINC01953-201ENST00000426870 A2ML1A8K2U0 1454 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 PLEKHH2Q8IVE3 1493 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 NEO1Q92859 1461 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 ADGBQ8N7X0 1667 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 ANKRD31Q8N7Z5 1873 aa1.34□□□□□ -2.19
LINC01953-201ENST00000426870 UBR2Q8IWV8 1755 aa1.34□□□□□ -2.2
LINC01953-201ENST00000426870 NRKQ7Z2Y5 1582 aa1.34□□□□□ -2.2
LINC01953-201ENST00000426870 KIF13AQ9H1H9 1805 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 RP1L1Q8IWN7 2480 aaPredicted RBP1.33□□□□□ -2.2
LINC01953-201ENST00000426870 TROQ12816 1431 aaPredicted RBP1.33□□□□□ -2.2
LINC01953-201ENST00000426870 RALGAPA2Q2PPJ7 1873 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 ZC3H13Q5T200 1668 aaKnown RBP1.33□□□□□ -2.2
LINC01953-201ENST00000426870 MIA3Q5JRA6 1907 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 CCDC88BA6NC98 1476 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 CEP164Q9UPV0 1460 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 TRBV20-1A0A075B6N2 111 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 TRAV13-1A0A0B4J241 112 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 IGKV1-9A0A0C4DH69 117 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 MUC21A0A0G2JKD1 596 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 MEIS3P1A6NDR6 274 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 ARRDC5A6NEK1 342 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 CD300LBA8K4G0 201 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 ZNF727A8MUV8 499 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 A8MWV9 139 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 OOSP1A8MZH6 123 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 H3BRN7 92 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 GEMIN2O14893 280 aaKnown RBP1.33□□□□□ -2.2
LINC01953-201ENST00000426870 EDF1O60869 148 aaKnown RBP1.33□□□□□ -2.2
LINC01953-201ENST00000426870 CST7O76096 145 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 SLC25A5P05141 298 aaKnown RBP1.33□□□□□ -2.2
LINC01953-201ENST00000426870 IGLC1P0CG04 106 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 TRAPPC2P0DI81 140 aa1.33□□□□□ -2.2
LINC01953-201ENST00000426870 TRAPPC2BP0DI82 140 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms