RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 MRPL16Q9NX20 251 aaKnown RBP8.19□□□□□ -1.1
SP1-202ENST00000426431 CHTOPQ9Y3Y2 248 aaKnown RBP8.19□□□□□ -1.1
SP1-202ENST00000426431 FCN3O75636 299 aa8.19□□□□□ -1.1
SP1-202ENST00000426431 TYMSP04818 313 aa8.19□□□□□ -1.1
SP1-202ENST00000426431 SCGB1A1P11684 91 aa8.19□□□□□ -1.1
SP1-202ENST00000426431 SYNJ2BPP57105 145 aa8.19□□□□□ -1.1
SP1-202ENST00000426431 IFI27L1Q96BM0 104 aa8.19□□□□□ -1.1
SP1-202ENST00000426431 USF3Q68DE3 2245 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 SH2D1AO60880 128 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 PLP1P60201 277 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 Q6ZSR3 168 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 EXOC3-AS1Q8N2X6 119 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 WNK2Q9Y3S1 2297 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 A8MWV9 139 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 ZGRF1Q86YA3 2104 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 SPTAN1Q13813 2472 aaKnown RBP8.18□□□□□ -1.1
SP1-202ENST00000426431 IGKV1-6A0A0C4DH72 117 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 TMEM238C9JI98 176 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 HAPLN4Q86UW8 402 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 TEX48A0A1B0GUV7 120 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 LY6HO94772 140 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 Q86TA4 180 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 TRPT1Q86TN4 253 aaKnown RBP8.18□□□□□ -1.1
SP1-202ENST00000426431 TSSC4Q9Y5U2 329 aaPredicted RBP8.18□□□□□ -1.1
SP1-202ENST00000426431 IGKCP01834 107 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 KLF17Q5JT82 389 aaPredicted RBP8.18□□□□□ -1.1
SP1-202ENST00000426431 TEX43Q6ZNM6 134 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 WDR86Q86TI4 376 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 ZNF329Q86UD4 541 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 PRO3102Q9H379 93 aa8.18□□□□□ -1.1
SP1-202ENST00000426431 CKS1BP61024 79 aa8.17□□□□□ -1.1
SP1-202ENST00000426431 MST1LQ2TV78 715 aa8.17□□□□□ -1.1
SP1-202ENST00000426431 DEFB121Q5J5C9 76 aa8.17□□□□□ -1.1
SP1-202ENST00000426431 YLPM1P49750 1951 aaKnown RBP8.17□□□□□ -1.1
SP1-202ENST00000426431 GTF3C1Q12789 2109 aa8.17□□□□□ -1.1
SP1-202ENST00000426431 PKIGQ9Y2B9 76 aa8.17□□□□□ -1.1
SP1-202ENST00000426431 SERF1AO75920 110 aa8.17□□□□□ -1.1
SP1-202ENST00000426431 KRTAP27-1Q3LI81 207 aa8.17□□□□□ -1.1
SP1-202ENST00000426431 MTURNQ8N3F0 131 aa8.17□□□□□ -1.1
SP1-202ENST00000426431 VOPP1Q96AW1 172 aa8.17□□□□□ -1.1
SP1-202ENST00000426431 MRPL53Q96EL3 112 aaKnown RBP8.17□□□□□ -1.1
SP1-202ENST00000426431 OVOL2Q9BRP0 275 aa8.17□□□□□ -1.1
SP1-202ENST00000426431 TRAV9-2A0A087WT02 112 aa8.17□□□□□ -1.1
SP1-202ENST00000426431 RUSC1-AS1Q66K80 236 aa8.17□□□□□ -1.1
SP1-202ENST00000426431 THAP8Q8NA92 274 aa8.17□□□□□ -1.1
SP1-202ENST00000426431 RMI2Q96E14 147 aa8.17□□□□□ -1.1
SP1-202ENST00000426431 TRAV12-3A0A0B4J271 114 aa8.17□□□□□ -1.1
SP1-202ENST00000426431 ADMP35318 185 aa8.16□□□□□ -1.1
SP1-202ENST00000426431 SPXQ9BT56 116 aa8.16□□□□□ -1.1
SP1-202ENST00000426431 VSIRQ9H7M9 311 aa8.16□□□□□ -1.1
SP1-202ENST00000426431 LENEPQ9Y5L5 61 aa8.16□□□□□ -1.1
SP1-202ENST00000426431 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.16□□□□□ -1.1
SP1-202ENST00000426431 TMEM89A2RUT3 159 aa8.16□□□□□ -1.1
SP1-202ENST00000426431 DEFB131AP59861 70 aa8.16□□□□□ -1.1
SP1-202ENST00000426431 ERCC8Q13216 396 aa8.16□□□□□ -1.1
SP1-202ENST00000426431 ZNF876PQ49A33 203 aa8.16□□□□□ -1.1
SP1-202ENST00000426431 LYZL1Q6UWQ5 148 aa8.16□□□□□ -1.1
SP1-202ENST00000426431 RNF152Q8N8N0 203 aa8.16□□□□□ -1.1
SP1-202ENST00000426431 LHBP01229 141 aa8.16□□□□□ -1.1
SP1-202ENST00000426431 SS18Q15532 418 aa8.16□□□□□ -1.1
SP1-202ENST00000426431 LHFPL4Q7Z7J7 247 aa8.16□□□□□ -1.1
SP1-202ENST00000426431 PCNX1Q96RV3 2341 aa8.16□□□□□ -1.1
SP1-202ENST00000426431 FOXE3Q13461 319 aa8.15□□□□□ -1.1
SP1-202ENST00000426431 RSPO1Q2MKA7 263 aaPredicted RBP8.15□□□□□ -1.1
SP1-202ENST00000426431 LINC00469Q8N7U9 141 aa8.15□□□□□ -1.1
SP1-202ENST00000426431 NDUFA3O95167 84 aa8.15□□□□□ -1.1
SP1-202ENST00000426431 PFN1P07737 140 aaKnown RBP8.15□□□□□ -1.1
SP1-202ENST00000426431 NIT1Q86X76 327 aa8.15□□□□□ -1.1
SP1-202ENST00000426431 RPL35AP18077 110 aaKnown RBP8.15□□□□□ -1.1
SP1-202ENST00000426431 C2orf16Q68DN1 1984 aa8.15□□□□□ -1.1
SP1-202ENST00000426431 TRBV19A0A075B6N1 114 aa8.15□□□□□ -1.1
SP1-202ENST00000426431 C5orf30Q96GV9 206 aa8.15□□□□□ -1.1
SP1-202ENST00000426431 KIF26AQ9ULI4 1882 aaPredicted RBP8.15□□□□□ -1.1
SP1-202ENST00000426431 MUC21A0A0G2JKD1 596 aa8.15□□□□□ -1.11
SP1-202ENST00000426431 MUC21A0A140T8X8 626 aa8.15□□□□□ -1.11
SP1-202ENST00000426431 NDPQ00604 133 aa8.15□□□□□ -1.11
SP1-202ENST00000426431 H3BRN7 92 aa8.15□□□□□ -1.11
SP1-202ENST00000426431 GZMBP10144 247 aa8.15□□□□□ -1.11
SP1-202ENST00000426431 PLA2G5P39877 138 aa8.15□□□□□ -1.11
SP1-202ENST00000426431 Q6ZRM9 215 aa8.15□□□□□ -1.11
SP1-202ENST00000426431 TMEM256Q8N2U0 113 aa8.15□□□□□ -1.11
SP1-202ENST00000426431 TECTAO75443 2155 aa8.15□□□□□ -1.11
SP1-202ENST00000426431 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.15□□□□□ -1.11
SP1-202ENST00000426431 PGPEP1LA6NFU8 196 aa8.14□□□□□ -1.11
SP1-202ENST00000426431 LINC00518Q8N0U6 118 aa8.14□□□□□ -1.11
SP1-202ENST00000426431 ARL6IP6Q8N6S5 226 aa8.14□□□□□ -1.11
SP1-202ENST00000426431 TMEM249Q2WGJ8 235 aa8.14□□□□□ -1.11
SP1-202ENST00000426431 TCTEX1D4Q5JR98 221 aa8.14□□□□□ -1.11
SP1-202ENST00000426431 IGHV7-4-1A0A0J9YVY3 117 aa8.14□□□□□ -1.11
SP1-202ENST00000426431 HOXB4P17483 251 aaPredicted RBP8.14□□□□□ -1.11
SP1-202ENST00000426431 A0A0G2JRQ6 117 aa8.13□□□□□ -1.11
SP1-202ENST00000426431 CDKN1BP46527 198 aa8.13□□□□□ -1.11
SP1-202ENST00000426431 ZNF503-AS2A6NEH8 195 aa8.13□□□□□ -1.11
SP1-202ENST00000426431 FAM231DQ6ZW35 169 aa8.13□□□□□ -1.11
SP1-202ENST00000426431 RNF144BQ7Z419 303 aa8.13□□□□□ -1.11
SP1-202ENST00000426431 SSBP4Q9BWG4 385 aaPredicted RBP8.13□□□□□ -1.11
SP1-202ENST00000426431 LIME1Q9H400 295 aa8.13□□□□□ -1.11
SP1-202ENST00000426431 DENND4CQ5VZ89 1909 aa8.13□□□□□ -1.11
SP1-202ENST00000426431 K7EM74 188 aa8.13□□□□□ -1.11
SP1-202ENST00000426431 DAD1P61803 113 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms