RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 CXCL3P19876 107 aa12.53□□□□□ -0.4
GPC1-203ENST00000425056 RRAS2P62070 204 aaPredicted RBP12.53□□□□□ -0.4
GPC1-203ENST00000425056 C15orf53Q8NAA6 179 aa12.53□□□□□ -0.4
GPC1-203ENST00000425056 PLAC8L1A1L4L8 177 aa12.52□□□□□ -0.41
GPC1-203ENST00000425056 PRM2P04554 102 aa12.52□□□□□ -0.41
GPC1-203ENST00000425056 METTL15P1P0C7V9 234 aa12.52□□□□□ -0.41
GPC1-203ENST00000425056 S100A7AQ86SG5 101 aa12.52□□□□□ -0.41
GPC1-203ENST00000425056 OR8A1Q8NGG7 326 aa12.52□□□□□ -0.41
GPC1-203ENST00000425056 ENKURQ8TC29 256 aa12.52□□□□□ -0.41
GPC1-203ENST00000425056 NPVFQ9HCQ7 196 aa12.52□□□□□ -0.41
GPC1-203ENST00000425056 PKD1P98161 4303 aa12.52□□□□□ -0.41
GPC1-203ENST00000425056 TRAV12-2A0A075B6T6 113 aa12.51□□□□□ -0.41
GPC1-203ENST00000425056 TSC22D2O75157 780 aa12.51□□□□□ -0.41
GPC1-203ENST00000425056 MED14OSP0DP75 135 aa12.51□□□□□ -0.41
GPC1-203ENST00000425056 ANXA7P20073 488 aaKnown RBP12.51□□□□□ -0.41
GPC1-203ENST00000425056 TAS2R30P59541 319 aa12.51□□□□□ -0.41
GPC1-203ENST00000425056 HIST1H1AQ02539 215 aaPredicted RBP12.51□□□□□ -0.41
GPC1-203ENST00000425056 IAH1Q2TAA2 248 aaPredicted RBP12.51□□□□□ -0.41
GPC1-203ENST00000425056 C4orf46Q504U0 113 aa12.51□□□□□ -0.41
GPC1-203ENST00000425056 TEPPQ6URK8 271 aa12.51□□□□□ -0.41
GPC1-203ENST00000425056 PATE2Q6UY27 113 aa12.51□□□□□ -0.41
GPC1-203ENST00000425056 TMEM256Q8N2U0 113 aa12.51□□□□□ -0.41
GPC1-203ENST00000425056 OR10P1Q8NGE3 313 aa12.51□□□□□ -0.41
GPC1-203ENST00000425056 ARL6Q9H0F7 186 aa12.51□□□□□ -0.41
GPC1-203ENST00000425056 MGAT4CQ9UBM8 478 aa12.51□□□□□ -0.41
GPC1-203ENST00000425056 RNF24Q9Y225 148 aa12.51□□□□□ -0.41
GPC1-203ENST00000425056 RCL1Q9Y2P8 373 aaKnown RBP12.51□□□□□ -0.41
GPC1-203ENST00000425056 DYNC1H1Q14204 4646 aaKnown RBP12.5□□□□□ -0.41
GPC1-203ENST00000425056 MRPS12O15235 138 aaKnown RBP12.5□□□□□ -0.41
GPC1-203ENST00000425056 PTTG1O95997 202 aa12.5□□□□□ -0.41
GPC1-203ENST00000425056 TCRBP04435 133 aa12.5□□□□□ -0.41
GPC1-203ENST00000425056 CXCL2P19875 107 aa12.5□□□□□ -0.41
GPC1-203ENST00000425056 FAM3BP58499 235 aaPredicted RBP12.5□□□□□ -0.41
GPC1-203ENST00000425056 SLC38A11Q08AI6 406 aa12.5□□□□□ -0.41
GPC1-203ENST00000425056 PSG3Q16557 428 aa12.5□□□□□ -0.41
GPC1-203ENST00000425056 PXDC1Q5TGL8 231 aa12.5□□□□□ -0.41
GPC1-203ENST00000425056 ARV1Q9H2C2 271 aa12.5□□□□□ -0.41
GPC1-203ENST00000425056 DNAH11Q96DT5 4516 aa12.5□□□□□ -0.41
GPC1-203ENST00000425056 SCGB1D2O95969 90 aa12.49□□□□□ -0.41
GPC1-203ENST00000425056 ZNF546Q86UE3 836 aa12.49□□□□□ -0.41
GPC1-203ENST00000425056 ZBTB8BQ8NAP8 495 aaPredicted RBP12.49□□□□□ -0.41
GPC1-203ENST00000425056 MITD1Q8WV92 249 aa12.49□□□□□ -0.41
GPC1-203ENST00000425056 C20orf85Q9H1P6 137 aa12.49□□□□□ -0.41
GPC1-203ENST00000425056 AZU1P20160 251 aa12.48□□□□□ -0.41
GPC1-203ENST00000425056 RHOBP62745 196 aa12.48□□□□□ -0.41
GPC1-203ENST00000425056 SOHLH1Q5JUK2 328 aa12.48□□□□□ -0.41
GPC1-203ENST00000425056 LCN15Q6UWW0 184 aa12.48□□□□□ -0.41
GPC1-203ENST00000425056 NRARPQ7Z6K4 114 aa12.48□□□□□ -0.41
GPC1-203ENST00000425056 LRRC20Q8TCA0 184 aa12.48□□□□□ -0.41
GPC1-203ENST00000425056 RPUSD4Q96CM3 377 aaKnown RBP12.48□□□□□ -0.41
GPC1-203ENST00000425056 GGACTQ9BVM4 153 aa12.48□□□□□ -0.41
GPC1-203ENST00000425056 NUDT15Q9NV35 164 aa12.48□□□□□ -0.41
GPC1-203ENST00000425056 AGPAT2O15120 278 aa12.47□□□□□ -0.41
GPC1-203ENST00000425056 DEFB130BP0DP73 79 aa12.47□□□□□ -0.41
GPC1-203ENST00000425056 DEFB130AP0DP74 79 aa12.47□□□□□ -0.41
GPC1-203ENST00000425056 TAS2R60P59551 318 aa12.47□□□□□ -0.41
GPC1-203ENST00000425056 ARL16Q0P5N6 197 aa12.47□□□□□ -0.41
GPC1-203ENST00000425056 RGS21Q2M5E4 152 aa12.47□□□□□ -0.41
GPC1-203ENST00000425056 LINC00305Q7Z4B0 112 aa12.47□□□□□ -0.41
GPC1-203ENST00000425056 C16orf74Q96GX8 76 aa12.47□□□□□ -0.41
GPC1-203ENST00000425056 LINC01587Q99440 93 aa12.47□□□□□ -0.41
GPC1-203ENST00000425056 SLC50A1Q9BRV3 221 aa12.47□□□□□ -0.41
GPC1-203ENST00000425056 ZNF331Q9NQX6 463 aaPredicted RBP12.47□□□□□ -0.41
GPC1-203ENST00000425056 PPP1R14DQ9NXH3 145 aa12.47□□□□□ -0.41
GPC1-203ENST00000425056 C7orf66A4D0T2 115 aa12.46□□□□□ -0.41
GPC1-203ENST00000425056 GOSR2O14653 212 aa12.46□□□□□ -0.41
GPC1-203ENST00000425056 MBPP02686 304 aaPredicted RBP12.46□□□□□ -0.41
GPC1-203ENST00000425056 ATP5G1P05496 136 aa12.46□□□□□ -0.41
GPC1-203ENST00000425056 CDKN1BP46527 198 aa12.46□□□□□ -0.41
GPC1-203ENST00000425056 ATP5G3P48201 142 aa12.46□□□□□ -0.41
GPC1-203ENST00000425056 C1orf134Q5TEV5 83 aa12.46□□□□□ -0.41
GPC1-203ENST00000425056 GSKIPQ9P0R6 139 aa12.46□□□□□ -0.41
GPC1-203ENST00000425056 H2AFB2P0C5Z0 115 aa12.45□□□□□ -0.42
GPC1-203ENST00000425056 FCN2Q15485 313 aa12.45□□□□□ -0.42
GPC1-203ENST00000425056 RNASE8Q8TDE3 154 aaKnown RBP12.45□□□□□ -0.42
GPC1-203ENST00000425056 MGST2Q99735 147 aa12.45□□□□□ -0.42
GPC1-203ENST00000425056 ATG101Q9BSB4 218 aa12.45□□□□□ -0.42
GPC1-203ENST00000425056 MUC4Q99102 2169 aa12.45□□□□□ -0.42
GPC1-203ENST00000425056 TRAV6A0A075B6T7 132 aa12.44□□□□□ -0.42
GPC1-203ENST00000425056 CBY3A6NI87 242 aa12.44□□□□□ -0.42
GPC1-203ENST00000425056 F5H768 121 aa12.44□□□□□ -0.42
GPC1-203ENST00000425056 COX7A2P2O60397 106 aa12.44□□□□□ -0.42
GPC1-203ENST00000425056 PRB4P10163 310 aaPredicted RBP12.44□□□□□ -0.42
GPC1-203ENST00000425056 MORN5Q5VZ52 161 aa12.44□□□□□ -0.42
GPC1-203ENST00000425056 ZNF493Q6ZR52 646 aa12.44□□□□□ -0.42
GPC1-203ENST00000425056 BPIFA4PQ86YQ2 179 aa12.44□□□□□ -0.42
GPC1-203ENST00000425056 TMEM263Q8WUH6 116 aaKnown RBP12.44□□□□□ -0.42
GPC1-203ENST00000425056 TMEM37Q8WXS4 190 aa12.44□□□□□ -0.42
GPC1-203ENST00000425056 C20orf144Q9BQM9 153 aa12.44□□□□□ -0.42
GPC1-203ENST00000425056 MARVELD1Q9BSK0 173 aa12.44□□□□□ -0.42
GPC1-203ENST00000425056 TIMM8BQ9Y5J9 83 aaPredicted RBP12.44□□□□□ -0.42
GPC1-203ENST00000425056 H7BYZ3 331 aa12.43□□□□□ -0.42
GPC1-203ENST00000425056 SLC17A3O00476 420 aa12.43□□□□□ -0.42
GPC1-203ENST00000425056 ZNRF2Q8NHG8 242 aa12.43□□□□□ -0.42
GPC1-203ENST00000425056 INMT-MINDY4F8WBC2 141 aa12.42□□□□□ -0.42
GPC1-203ENST00000425056 CCSO14618 274 aa12.42□□□□□ -0.42
GPC1-203ENST00000425056 PRAF2O60831 178 aa12.42□□□□□ -0.42
GPC1-203ENST00000425056 IGLC2P0DOY2 106 aa12.42□□□□□ -0.42
GPC1-203ENST00000425056 HTN1P15515 57 aa12.42□□□□□ -0.42
GPC1-203ENST00000425056 OPCMLQ14982 345 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms