RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 ZNF846Q147U1 533 aa11.42□□□□□ -0.58
COL18A1-205ENST00000423214 IGFL4Q6B9Z1 124 aa11.42□□□□□ -0.58
COL18A1-205ENST00000423214 TMEM14EPQ6UXP3 125 aa11.42□□□□□ -0.58
COL18A1-205ENST00000423214 CYP2G1PQ6ZSU1 146 aa11.42□□□□□ -0.58
COL18A1-205ENST00000423214 SLC25A39Q9BZJ4 359 aaPredicted RBP11.42□□□□□ -0.58
COL18A1-205ENST00000423214 PPP1R14DQ9NXH3 145 aa11.42□□□□□ -0.58
COL18A1-205ENST00000423214 C7orf66A4D0T2 115 aa11.41□□□□□ -0.58
COL18A1-205ENST00000423214 C5orf51A6NDU8 294 aa11.41□□□□□ -0.58
COL18A1-205ENST00000423214 OR5G3P0C626 314 aa11.41□□□□□ -0.58
COL18A1-205ENST00000423214 LINC00869P0C866 280 aa11.41□□□□□ -0.58
COL18A1-205ENST00000423214 DEFB130BP0DP73 79 aa11.41□□□□□ -0.58
COL18A1-205ENST00000423214 DEFB130AP0DP74 79 aa11.41□□□□□ -0.58
COL18A1-205ENST00000423214 FAM3BP58499 235 aaPredicted RBP11.41□□□□□ -0.58
COL18A1-205ENST00000423214 RHOBP62745 196 aa11.41□□□□□ -0.58
COL18A1-205ENST00000423214 HIST1H1AQ02539 215 aaPredicted RBP11.41□□□□□ -0.58
COL18A1-205ENST00000423214 ARL16Q0P5N6 197 aa11.41□□□□□ -0.58
COL18A1-205ENST00000423214 LINC00299Q6ZSB3 139 aa11.41□□□□□ -0.58
COL18A1-205ENST00000423214 S100A7AQ86SG5 101 aa11.41□□□□□ -0.58
COL18A1-205ENST00000423214 C12orf45Q8N5I9 185 aaPredicted RBP11.41□□□□□ -0.58
COL18A1-205ENST00000423214 OR10P1Q8NGE3 313 aa11.41□□□□□ -0.58
COL18A1-205ENST00000423214 LRRC20Q8TCA0 184 aa11.41□□□□□ -0.58
COL18A1-205ENST00000423214 C17orf77Q96MU5 243 aa11.41□□□□□ -0.58
COL18A1-205ENST00000423214 SHANK2-AS3Q9BTD1 123 aa11.41□□□□□ -0.58
COL18A1-205ENST00000423214 LSM5Q9Y4Y9 91 aaKnown RBP11.41□□□□□ -0.58
COL18A1-205ENST00000423214 CRXO43186 299 aaPredicted RBP11.4□□□□□ -0.58
COL18A1-205ENST00000423214 TSPOP30536 169 aa11.4□□□□□ -0.58
COL18A1-205ENST00000423214 DLK1P80370 383 aa11.4□□□□□ -0.58
COL18A1-205ENST00000423214 MZT2BQ6NZ67 158 aa11.4□□□□□ -0.58
COL18A1-205ENST00000423214 NPVFQ9HCQ7 196 aa11.4□□□□□ -0.58
COL18A1-205ENST00000423214 TRAV12-2A0A075B6T6 113 aa11.39□□□□□ -0.59
COL18A1-205ENST00000423214 TRAV8-2A0A0B4J237 113 aa11.39□□□□□ -0.59
COL18A1-205ENST00000423214 F5H768 121 aa11.39□□□□□ -0.59
COL18A1-205ENST00000423214 L7N2F9 121 aa11.39□□□□□ -0.59
COL18A1-205ENST00000423214 TSC22D2O75157 780 aa11.39□□□□□ -0.59
COL18A1-205ENST00000423214 HYPMO75409 117 aa11.39□□□□□ -0.59
COL18A1-205ENST00000423214 TAS2R30P59541 319 aa11.39□□□□□ -0.59
COL18A1-205ENST00000423214 SELENOTP62341 195 aa11.39□□□□□ -0.59
COL18A1-205ENST00000423214 VAMP2P63027 116 aa11.39□□□□□ -0.59
COL18A1-205ENST00000423214 ZNF575Q86XF7 245 aa11.39□□□□□ -0.59
COL18A1-205ENST00000423214 TMEM256Q8N2U0 113 aa11.39□□□□□ -0.59
COL18A1-205ENST00000423214 UHRF2Q96PU4 802 aa11.39□□□□□ -0.59
COL18A1-205ENST00000423214 MGAT4CQ9UBM8 478 aa11.39□□□□□ -0.59
COL18A1-205ENST00000423214 K7EPK0 472 aa11.38□□□□□ -0.59
COL18A1-205ENST00000423214 NUDT3O95989 172 aa11.38□□□□□ -0.59
COL18A1-205ENST00000423214 PRM2P04554 102 aa11.38□□□□□ -0.59
COL18A1-205ENST00000423214 ATP5G1P05496 136 aa11.38□□□□□ -0.59
COL18A1-205ENST00000423214 ATP5G3P48201 142 aa11.38□□□□□ -0.59
COL18A1-205ENST00000423214 BCAP31P51572 246 aa11.38□□□□□ -0.59
COL18A1-205ENST00000423214 IFITM3Q01628 133 aa11.38□□□□□ -0.59
COL18A1-205ENST00000423214 SLC38A11Q08AI6 406 aa11.38□□□□□ -0.59
COL18A1-205ENST00000423214 ASAH1Q13510 395 aa11.38□□□□□ -0.59
COL18A1-205ENST00000423214 OR8A1Q8NGG7 326 aa11.38□□□□□ -0.59
COL18A1-205ENST00000423214 C2orf50Q96LR7 162 aa11.38□□□□□ -0.59
COL18A1-205ENST00000423214 RNF24Q9Y225 148 aa11.38□□□□□ -0.59
COL18A1-205ENST00000423214 RYR1P21817 5038 aa11.37□□□□□ -0.59
COL18A1-205ENST00000423214 A0A087X0K7 114 aa11.37□□□□□ -0.59
COL18A1-205ENST00000423214 FAM24AA6NFZ4 105 aa11.37□□□□□ -0.59
COL18A1-205ENST00000423214 UPK1BO75841 260 aa11.37□□□□□ -0.59
COL18A1-205ENST00000423214 HTN1P15515 57 aa11.37□□□□□ -0.59
COL18A1-205ENST00000423214 TEPPQ6URK8 271 aa11.37□□□□□ -0.59
COL18A1-205ENST00000423214 C16orf74Q96GX8 76 aa11.37□□□□□ -0.59
COL18A1-205ENST00000423214 LINC01587Q99440 93 aa11.37□□□□□ -0.59
COL18A1-205ENST00000423214 ARL6Q9H0F7 186 aa11.37□□□□□ -0.59
COL18A1-205ENST00000423214 CST7O76096 145 aa11.36□□□□□ -0.59
COL18A1-205ENST00000423214 CXCL3P19876 107 aa11.36□□□□□ -0.59
COL18A1-205ENST00000423214 CAV2P51636 162 aa11.36□□□□□ -0.59
COL18A1-205ENST00000423214 PLP1P60201 277 aa11.36□□□□□ -0.59
COL18A1-205ENST00000423214 PSG3Q16557 428 aa11.36□□□□□ -0.59
COL18A1-205ENST00000423214 PATE2Q6UY27 113 aa11.36□□□□□ -0.59
COL18A1-205ENST00000423214 ENKURQ8TC29 256 aa11.36□□□□□ -0.59
COL18A1-205ENST00000423214 PTTG2Q9NZH5 202 aa11.36□□□□□ -0.59
COL18A1-205ENST00000423214 PLAC8L1A1L4L8 177 aa11.35□□□□□ -0.59
COL18A1-205ENST00000423214 FNDC10F2Z333 226 aa11.35□□□□□ -0.59
COL18A1-205ENST00000423214 GOSR2O14653 212 aa11.35□□□□□ -0.59
COL18A1-205ENST00000423214 AZU1P20160 251 aa11.35□□□□□ -0.59
COL18A1-205ENST00000423214 CCL18P55774 89 aa11.35□□□□□ -0.59
COL18A1-205ENST00000423214 TAS2R60P59551 318 aa11.35□□□□□ -0.59
COL18A1-205ENST00000423214 S100A10P60903 97 aa11.35□□□□□ -0.59
COL18A1-205ENST00000423214 ARV1Q9H2C2 271 aa11.35□□□□□ -0.59
COL18A1-205ENST00000423214 C11orf1Q9H5F2 150 aa11.35□□□□□ -0.59
COL18A1-205ENST00000423214 TIMM8BQ9Y5J9 83 aaPredicted RBP11.35□□□□□ -0.59
COL18A1-205ENST00000423214 NBDYA0A0U1RRE5 68 aa11.34□□□□□ -0.59
COL18A1-205ENST00000423214 CBY3A6NI87 242 aa11.34□□□□□ -0.59
COL18A1-205ENST00000423214 AGPAT2O15120 278 aa11.34□□□□□ -0.59
COL18A1-205ENST00000423214 CXCL2P19875 107 aa11.34□□□□□ -0.59
COL18A1-205ENST00000423214 CDKN1BP46527 198 aa11.34□□□□□ -0.59
COL18A1-205ENST00000423214 IL15RAQ13261 267 aa11.34□□□□□ -0.59
COL18A1-205ENST00000423214 RAB32Q13637 225 aa11.34□□□□□ -0.59
COL18A1-205ENST00000423214 CLINT1Q14677 625 aa11.34□□□□□ -0.59
COL18A1-205ENST00000423214 FCN2Q15485 313 aa11.34□□□□□ -0.59
COL18A1-205ENST00000423214 LCN15Q6UWW0 184 aa11.34□□□□□ -0.59
COL18A1-205ENST00000423214 ZNF546Q86UE3 836 aa11.34□□□□□ -0.59
COL18A1-205ENST00000423214 RPUSD4Q96CM3 377 aaKnown RBP11.34□□□□□ -0.59
COL18A1-205ENST00000423214 SIX6O95475 246 aa11.33□□□□□ -0.6
COL18A1-205ENST00000423214 PRB4P10163 310 aaPredicted RBP11.33□□□□□ -0.6
COL18A1-205ENST00000423214 PVALBP20472 110 aaPredicted RBP11.33□□□□□ -0.6
COL18A1-205ENST00000423214 PXDC1Q5TGL8 231 aa11.33□□□□□ -0.6
COL18A1-205ENST00000423214 NRARPQ7Z6K4 114 aa11.33□□□□□ -0.6
COL18A1-205ENST00000423214 C6orf223Q8N319 242 aa11.33□□□□□ -0.6
COL18A1-205ENST00000423214 ZNRF2Q8NHG8 242 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms