RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 PVALBP20472 110 aaPredicted RBP15.21■□□□□ 0.03
PTPN4-202ENST00000420482 BCAP31P51572 246 aa15.21■□□□□ 0.03
PTPN4-202ENST00000420482 HIST1H1AQ02539 215 aaPredicted RBP15.21■□□□□ 0.03
PTPN4-202ENST00000420482 LCN15Q6UWW0 184 aa15.21■□□□□ 0.03
PTPN4-202ENST00000420482 LINC00336Q6ZUF6 198 aa15.21■□□□□ 0.03
PTPN4-202ENST00000420482 UBE2DNLQ8IWF7 75 aa15.21■□□□□ 0.03
PTPN4-202ENST00000420482 C5orf51A6NDU8 294 aa15.2■□□□□ 0.02
PTPN4-202ENST00000420482 COX7A2P2O60397 106 aa15.2■□□□□ 0.02
PTPN4-202ENST00000420482 HTN3P15516 51 aa15.2■□□□□ 0.02
PTPN4-202ENST00000420482 PSG3Q16557 428 aa15.2■□□□□ 0.02
PTPN4-202ENST00000420482 LINC00305Q7Z4B0 112 aa15.2■□□□□ 0.02
PTPN4-202ENST00000420482 BPIFA4PQ86YQ2 179 aa15.2■□□□□ 0.02
PTPN4-202ENST00000420482 TMEM256Q8N2U0 113 aa15.2■□□□□ 0.02
PTPN4-202ENST00000420482 OR8A1Q8NGG7 326 aa15.2■□□□□ 0.02
PTPN4-202ENST00000420482 SLC50A1Q9BRV3 221 aa15.2■□□□□ 0.02
PTPN4-202ENST00000420482 TRAV6A0A075B6T7 132 aa15.19■□□□□ 0.02
PTPN4-202ENST00000420482 LYRM9A8MSI8 78 aa15.19■□□□□ 0.02
PTPN4-202ENST00000420482 PLA2G10O15496 165 aa15.19■□□□□ 0.02
PTPN4-202ENST00000420482 TSPOP30536 169 aa15.19■□□□□ 0.02
PTPN4-202ENST00000420482 CAV2P51636 162 aa15.19■□□□□ 0.02
PTPN4-202ENST00000420482 Q6ZRG5 221 aa15.19■□□□□ 0.02
PTPN4-202ENST00000420482 ZNF431Q8TF32 576 aaPredicted RBP15.19■□□□□ 0.02
PTPN4-202ENST00000420482 NUDT15Q9NV35 164 aa15.19■□□□□ 0.02
PTPN4-202ENST00000420482 LSM5Q9Y4Y9 91 aaKnown RBP15.19■□□□□ 0.02
PTPN4-202ENST00000420482 CCSO14618 274 aa15.18■□□□□ 0.02
PTPN4-202ENST00000420482 PATE2Q6UY27 113 aa15.18■□□□□ 0.02
PTPN4-202ENST00000420482 CCDC32Q9BV29 185 aa15.18■□□□□ 0.02
PTPN4-202ENST00000420482 C10orf113Q5VZT2 155 aa15.17■□□□□ 0.02
PTPN4-202ENST00000420482 RPUSD4Q96CM3 377 aaKnown RBP15.17■□□□□ 0.02
PTPN4-202ENST00000420482 ZNF705GA8MUZ8 300 aaPredicted RBP15.16■□□□□ 0.02
PTPN4-202ENST00000420482 CRXO43186 299 aaPredicted RBP15.16■□□□□ 0.02
PTPN4-202ENST00000420482 CAMLGP49069 296 aa15.16■□□□□ 0.02
PTPN4-202ENST00000420482 ARL16Q0P5N6 197 aa15.16■□□□□ 0.02
PTPN4-202ENST00000420482 BAP18Q8IXM2 172 aa15.16■□□□□ 0.02
PTPN4-202ENST00000420482 C12orf45Q8N5I9 185 aaPredicted RBP15.16■□□□□ 0.02
PTPN4-202ENST00000420482 C2orf50Q96LR7 162 aa15.16■□□□□ 0.02
PTPN4-202ENST00000420482 LINC01587Q99440 93 aa15.16■□□□□ 0.02
PTPN4-202ENST00000420482 KIAA1109Q2LD37 5005 aa15.15■□□□□ 0.02
PTPN4-202ENST00000420482 TRAV12-2A0A075B6T6 113 aa15.15■□□□□ 0.02
PTPN4-202ENST00000420482 CDKN1BP46527 198 aa15.15■□□□□ 0.02
PTPN4-202ENST00000420482 RNF212Q495C1 297 aa15.15■□□□□ 0.02
PTPN4-202ENST00000420482 MZT2BQ6NZ67 158 aa15.15■□□□□ 0.02
PTPN4-202ENST00000420482 C15orf53Q8NAA6 179 aa15.15■□□□□ 0.02
PTPN4-202ENST00000420482 OR1L4Q8NGR5 311 aa15.15■□□□□ 0.02
PTPN4-202ENST00000420482 PFDN5Q99471 154 aa15.15■□□□□ 0.02
PTPN4-202ENST00000420482 MGST2Q99735 147 aa15.15■□□□□ 0.02
PTPN4-202ENST00000420482 ZNF331Q9NQX6 463 aaPredicted RBP15.15■□□□□ 0.02
PTPN4-202ENST00000420482 UQCC1Q9NVA1 299 aa15.15■□□□□ 0.02
PTPN4-202ENST00000420482 PLA2G2EQ9NZK7 142 aa15.15■□□□□ 0.02
PTPN4-202ENST00000420482 PXMP4Q9Y6I8 212 aa15.15■□□□□ 0.02
PTPN4-202ENST00000420482 FAM240BA0A1B0GVZ2 78 aa15.14■□□□□ 0.01
PTPN4-202ENST00000420482 H2AFB2P0C5Z0 115 aa15.14■□□□□ 0.01
PTPN4-202ENST00000420482 HBG1P69891 147 aa15.14■□□□□ 0.01
PTPN4-202ENST00000420482 HBG2P69892 147 aa15.14■□□□□ 0.01
PTPN4-202ENST00000420482 STX12Q86Y82 276 aa15.14■□□□□ 0.01
PTPN4-202ENST00000420482 OR10J6PQ8NGY7 276 aa15.14■□□□□ 0.01
PTPN4-202ENST00000420482 SEC22CQ9BRL7 303 aa15.14■□□□□ 0.01
PTPN4-202ENST00000420482 DNAJC4Q9NNZ3 241 aa15.14■□□□□ 0.01
PTPN4-202ENST00000420482 MRPS12O15235 138 aaKnown RBP15.13■□□□□ 0.01
PTPN4-202ENST00000420482 CST7O76096 145 aa15.13■□□□□ 0.01
PTPN4-202ENST00000420482 S100A11P31949 105 aa15.13■□□□□ 0.01
PTPN4-202ENST00000420482 TAS2R60P59551 318 aa15.13■□□□□ 0.01
PTPN4-202ENST00000420482 S100A10P60903 97 aa15.13■□□□□ 0.01
PTPN4-202ENST00000420482 GUK1Q16774 197 aa15.13■□□□□ 0.01
PTPN4-202ENST00000420482 LGALS9BQ3B8N2 356 aa15.13■□□□□ 0.01
PTPN4-202ENST00000420482 LINC00299Q6ZSB3 139 aa15.13■□□□□ 0.01
PTPN4-202ENST00000420482 NRARPQ7Z6K4 114 aa15.13■□□□□ 0.01
PTPN4-202ENST00000420482 C16orf74Q96GX8 76 aa15.13■□□□□ 0.01
PTPN4-202ENST00000420482 PCLOQ9Y6V0 5065 aa15.13■□□□□ 0.01
PTPN4-202ENST00000420482 SULT1A1P50225 295 aa15.12■□□□□ 0.01
PTPN4-202ENST00000420482 TMEM88Q6PEY1 159 aa15.12■□□□□ 0.01
PTPN4-202ENST00000420482 ZNF493Q6ZR52 646 aa15.12■□□□□ 0.01
PTPN4-202ENST00000420482 S100ZQ8WXG8 99 aa15.12■□□□□ 0.01
PTPN4-202ENST00000420482 TMEM37Q8WXS4 190 aa15.12■□□□□ 0.01
PTPN4-202ENST00000420482 C20orf144Q9BQM9 153 aa15.12■□□□□ 0.01
PTPN4-202ENST00000420482 LYRM2Q9NU23 88 aaPredicted RBP15.12■□□□□ 0.01
PTPN4-202ENST00000420482 M0R2N4 97 aa15.11■□□□□ 0.01
PTPN4-202ENST00000420482 DEFB130BP0DP73 79 aa15.11■□□□□ 0.01
PTPN4-202ENST00000420482 DEFB130AP0DP74 79 aa15.11■□□□□ 0.01
PTPN4-202ENST00000420482 HTN1P15515 57 aa15.11■□□□□ 0.01
PTPN4-202ENST00000420482 WDR83OSQ9Y284 106 aa15.11■□□□□ 0.01
PTPN4-202ENST00000420482 FAM24AA6NFZ4 105 aa15.1■□□□□ 0.01
PTPN4-202ENST00000420482 H7BYZ3 331 aa15.1■□□□□ 0.01
PTPN4-202ENST00000420482 FAM3BP58499 235 aaPredicted RBP15.1■□□□□ 0.01
PTPN4-202ENST00000420482 BAXQ07812 192 aa15.1■□□□□ 0.01
PTPN4-202ENST00000420482 OPCMLQ14982 345 aa15.1■□□□□ 0.01
PTPN4-202ENST00000420482 SOHLH1Q5JUK2 328 aa15.1■□□□□ 0.01
PTPN4-202ENST00000420482 TIMM8BQ9Y5J9 83 aaPredicted RBP15.1■□□□□ 0.01
PTPN4-202ENST00000420482 ATP5G1P05496 136 aa15.09■□□□□ 0.01
PTPN4-202ENST00000420482 RPL29P47914 159 aaKnown RBP15.09■□□□□ 0.01
PTPN4-202ENST00000420482 ATP5G3P48201 142 aa15.09■□□□□ 0.01
PTPN4-202ENST00000420482 ATP6V1FQ16864 119 aa15.09■□□□□ 0.01
PTPN4-202ENST00000420482 VWC2Q2TAL6 325 aa15.09■□□□□ 0.01
PTPN4-202ENST00000420482 CCDC28AQ8IWP9 274 aa15.09■□□□□ 0.01
PTPN4-202ENST00000420482 ATG101Q9BSB4 218 aa15.09■□□□□ 0.01
PTPN4-202ENST00000420482 GPN1Q9HCN4 374 aaPredicted RBP15.09■□□□□ 0.01
PTPN4-202ENST00000420482 UBE2L5PA0A1B0GUS4 154 aa15.08■□□□□ 0
PTPN4-202ENST00000420482 CBY3A6NI87 242 aa15.08■□□□□ 0
PTPN4-202ENST00000420482 PRM2P04554 102 aa15.08■□□□□ 0
PTPN4-202ENST00000420482 SNRPCP09234 159 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms