RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 TPPP2P59282 170 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 UBE2G2P60604 165 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 SNRPEP62304 92 aaKnown RBP2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 RHOGP84095 191 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 MEF2BQ02080 365 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 ZNF90Q03938 601 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 SCGB2A2Q13296 93 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 TIGITQ495A1 244 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 GCSAMLQ5JQS6 135 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 SOHLH1Q5JUK2 328 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 CST9LP1Q5W188 147 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 IL17RELQ6ZVW7 336 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 MIR17HGQ75NE6 70 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 TTC9CQ8N5M4 171 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR5AU1Q8NGC0 362 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR4F5Q8NH21 305 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 GATAD1Q8WUU5 269 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 EEF1AKMT3Q96AZ1 226 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR4F4Q96R69 305 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 RARRES2Q99969 163 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 SEC11CQ9BY50 192 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 NKX6-2Q9C056 277 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 SLC35B3Q9H1N7 401 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 YAE1D1Q9NRH1 226 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 TMEM167BQ9NRX6 74 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 C21orf62Q9NYP8 219 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 MRPL36Q9P0J6 103 aaKnown RBP2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 VPREB3Q9UKI3 123 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 HIGD1AQ9Y241 93 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 SOX21Q9Y651 276 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 NBEAQ8NFP9 2946 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 ZZEF1O43149 2961 aa2.91□□□□□ -1.94
HMGB3P20-201ENST00000417997 SPTBN1Q01082 2364 aaKnown RBP2.9□□□□□ -1.94
HMGB3P20-201ENST00000417997 ARID1AO14497 2285 aa2.9□□□□□ -1.94
HMGB3P20-201ENST00000417997 DOPEY1Q5JWR5 2465 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 IGKV1D-37A0A075B6S9 117 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 OR2T8A6NH00 312 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 FAM223BA6NKX1 122 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 ZNF727A8MUV8 499 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 C11orf94C9JXX5 98 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 G3V318 75 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 H3BUA1 57 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 CD5LO43866 347 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 PDE6DO43924 150 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 IL4P05112 153 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 CD5P06127 495 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 SRP19P09132 144 aaKnown RBP2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 IGLC1P0CG04 106 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 RD3LP0DJH9 198 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 C8orf88P0DMB2 117 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 ADCYAP1P18509 176 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 GPR183P32249 361 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 IER3P46695 156 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 SLC35B1P78383 322 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 CCL20P78556 96 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 ATP5G2Q06055 141 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 GAGE2BQ13066 116 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 KIAA0141Q14154 515 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 ZNF674Q2M3X9 581 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 C15orf32Q32M92 178 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 GAGE2EQ4V326 116 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 SPATA31B1PQ5VZV4 182 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 GAGE2AQ6NT46 116 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 LINC00305Q7Z4B0 112 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 FAM223AQ8IWN6 122 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 CYB561D1Q8N8Q1 229 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 NECAP1Q8NC96 275 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 STXBP6Q8NFX7 210 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 OR51G1Q8NGK1 321 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 PIFOQ8TCI5 191 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 VN1R17PQ8TDU5 208 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 Q8WTZ3 238 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 RPUSD4Q96CM3 377 aaKnown RBP2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 MS4A10Q96PG2 267 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 TXN2Q99757 166 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 TXNDC17Q9BRA2 123 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 NIPSNAP3BQ9BS92 247 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 PAXXQ9BUH6 204 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 DNAJC4Q9NNZ3 241 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 RPS10P5Q9NQ39 176 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 GAGE2DQ9UEU5 116 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 RABAC1Q9UI14 185 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 LINC00527Q9UJ94 153 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 RNF24Q9Y225 148 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 CARHSP1Q9Y2V2 147 aaKnown RBP2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 PUS1Q9Y606 427 aaKnown RBP eCLIP2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 NBASA2RRP1 2371 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 LAMA5O15230 3695 aa2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 PRRC2AP48634 2157 aaKnown RBP2.9□□□□□ -1.95
HMGB3P20-201ENST00000417997 KALRNO60229 2985 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 TRBV7-1A0A0A6YYK4 115 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 TRAV5A0A0B4J249 113 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 C9JQL5 133 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 TMEM250H0YL14 139 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 H3BRN7 92 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 TGOLN2O43493 480 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 NDUFS6O75380 124 aaKnown RBP2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 SCO1O75880 301 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 IGHG2P01859 326 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms