RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 TRAV41A0A0B4J266 112 aa10.38□□□□□ -0.75
SCAF8-203ENST00000417268 SAA4P35542 130 aa10.38□□□□□ -0.75
SCAF8-203ENST00000417268 C5orf64Q2M2E5 130 aa10.38□□□□□ -0.75
SCAF8-203ENST00000417268 FAM74A4Q5TZK3 123 aa10.38□□□□□ -0.75
SCAF8-203ENST00000417268 TMEM219Q86XT9 240 aa10.38□□□□□ -0.75
SCAF8-203ENST00000417268 C15orf62A8K5M9 175 aa10.38□□□□□ -0.75
SCAF8-203ENST00000417268 UBE2E1P51965 193 aa10.38□□□□□ -0.75
SCAF8-203ENST00000417268 RAX2Q96IS3 184 aa10.38□□□□□ -0.75
SCAF8-203ENST00000417268 IGKCP01834 107 aa10.38□□□□□ -0.75
SCAF8-203ENST00000417268 PSG8Q9UQ74 426 aa10.38□□□□□ -0.75
SCAF8-203ENST00000417268 PLCE1Q9P212 2302 aa10.38□□□□□ -0.75
SCAF8-203ENST00000417268 PVRIGQ6DKI7 326 aa10.38□□□□□ -0.75
SCAF8-203ENST00000417268 LHFPL4Q7Z7J7 247 aa10.38□□□□□ -0.75
SCAF8-203ENST00000417268 OR10W1Q8NGF6 305 aa10.38□□□□□ -0.75
SCAF8-203ENST00000417268 CEP192Q8TEP8 1941 aa10.38□□□□□ -0.75
SCAF8-203ENST00000417268 IGHV3-49A0A0A0MS15 119 aa10.37□□□□□ -0.75
SCAF8-203ENST00000417268 WIPF3A6NGB9 483 aa10.37□□□□□ -0.75
SCAF8-203ENST00000417268 PRB4P10163 310 aaPredicted RBP10.37□□□□□ -0.75
SCAF8-203ENST00000417268 MYOD1P15172 320 aa10.37□□□□□ -0.75
SCAF8-203ENST00000417268 DDB2Q92466 427 aa10.37□□□□□ -0.75
SCAF8-203ENST00000417268 CYSLTR1Q9Y271 337 aa10.37□□□□□ -0.75
SCAF8-203ENST00000417268 TRAV3A0A0B4J244 114 aa10.37□□□□□ -0.75
SCAF8-203ENST00000417268 LOXP28300 417 aaPredicted RBP10.37□□□□□ -0.75
SCAF8-203ENST00000417268 C10orf55Q5SWW7 151 aa10.37□□□□□ -0.75
SCAF8-203ENST00000417268 PEMTQ9UBM1 199 aa10.37□□□□□ -0.75
SCAF8-203ENST00000417268 LINC00473A8K010 186 aa10.37□□□□□ -0.75
SCAF8-203ENST00000417268 C18orf32Q8TCD1 76 aa10.37□□□□□ -0.75
SCAF8-203ENST00000417268 ITLN2Q8WWU7 325 aaPredicted RBP10.37□□□□□ -0.75
SCAF8-203ENST00000417268 Q96MF0 132 aa10.37□□□□□ -0.75
SCAF8-203ENST00000417268 KAAG1Q9UBP8 84 aa10.37□□□□□ -0.75
SCAF8-203ENST00000417268 LSM4Q9Y4Z0 139 aaKnown RBP10.37□□□□□ -0.75
SCAF8-203ENST00000417268 IGHV3OR16-8A0A075B7F1 116 aa10.37□□□□□ -0.75
SCAF8-203ENST00000417268 NPIPB6E9PJ23 425 aa10.37□□□□□ -0.75
SCAF8-203ENST00000417268 FXYD7P58549 80 aa10.37□□□□□ -0.75
SCAF8-203ENST00000417268 YPEL3P61236 119 aaPredicted RBP10.37□□□□□ -0.75
SCAF8-203ENST00000417268 NXT2Q9NPJ8 142 aaKnown RBP10.37□□□□□ -0.75
SCAF8-203ENST00000417268 LINC00205P59089 165 aa10.36□□□□□ -0.75
SCAF8-203ENST00000417268 FBXL19-AS1Q494R0 122 aa10.36□□□□□ -0.75
SCAF8-203ENST00000417268 SYT8Q8NBV8 401 aa10.36□□□□□ -0.75
SCAF8-203ENST00000417268 IGHV2-70DA0A0C4DH43 119 aa10.36□□□□□ -0.75
SCAF8-203ENST00000417268 FAM231BA6NCW3 169 aa10.36□□□□□ -0.75
SCAF8-203ENST00000417268 TMEM262E9PQX1 116 aa10.36□□□□□ -0.75
SCAF8-203ENST00000417268 CIRBPQ14011 172 aaKnown RBP10.36□□□□□ -0.75
SCAF8-203ENST00000417268 GTSCR1Q86UQ5 136 aa10.36□□□□□ -0.75
SCAF8-203ENST00000417268 SHANK1Q9Y566 2161 aa10.36□□□□□ -0.75
SCAF8-203ENST00000417268 EVI2AP22794 236 aa10.36□□□□□ -0.75
SCAF8-203ENST00000417268 C8orf46Q8TAG6 207 aa10.36□□□□□ -0.75
SCAF8-203ENST00000417268 IGKV1-6A0A0C4DH72 117 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 A8MWV9 139 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 D6R8Y8 96 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 PPBPP02775 128 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 TEX43Q6ZNM6 134 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 LINC00479Q96M42 142 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 LINC00527Q9UJ94 153 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 SIGLEC9Q9Y336 463 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 A0A1W2PRX2 142 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 SRD5A1P18405 259 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 CYYR1Q96J86 154 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 WISP2O76076 250 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 IGHV3-66A0A0C4DH42 116 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 FABP5P3A8MUU1 101 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 IGLL1P15814 213 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 ZNF56Q15929 161 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 PSG3Q16557 428 aa10.35□□□□□ -0.75
SCAF8-203ENST00000417268 NCR2O95944 276 aa10.34□□□□□ -0.75
SCAF8-203ENST00000417268 PPIFP30405 207 aaKnown RBP10.34□□□□□ -0.75
SCAF8-203ENST00000417268 RNF125Q96EQ8 232 aa10.34□□□□□ -0.75
SCAF8-203ENST00000417268 PSMB11A5LHX3 300 aa10.34□□□□□ -0.75
SCAF8-203ENST00000417268 ZNF114Q8NC26 417 aa10.34□□□□□ -0.75
SCAF8-203ENST00000417268 IGHV1-69DA0A0B4J2H0 117 aa10.34□□□□□ -0.75
SCAF8-203ENST00000417268 J3QLI3 93 aa10.34□□□□□ -0.75
SCAF8-203ENST00000417268 IGHV1-69P01742 117 aa10.34□□□□□ -0.75
SCAF8-203ENST00000417268 PAPPA-AS1Q5QFB9 102 aa10.34□□□□□ -0.75
SCAF8-203ENST00000417268 ADAMTSL5Q6ZMM2 481 aa10.34□□□□□ -0.75
SCAF8-203ENST00000417268 ZNF815PA8K554 130 aa10.33□□□□□ -0.76
SCAF8-203ENST00000417268 MAPK1IP1LQ8NDC0 245 aa10.33□□□□□ -0.76
SCAF8-203ENST00000417268 GEMIN7Q9H840 131 aaKnown RBP10.33□□□□□ -0.76
SCAF8-203ENST00000417268 GAGE2BQ13066 116 aa10.33□□□□□ -0.76
SCAF8-203ENST00000417268 KRTAP27-1Q3LI81 207 aa10.33□□□□□ -0.76
SCAF8-203ENST00000417268 GAGE2EQ4V326 116 aa10.33□□□□□ -0.76
SCAF8-203ENST00000417268 Q6ZVH6 145 aa10.33□□□□□ -0.76
SCAF8-203ENST00000417268 Q8NFD4 153 aa10.33□□□□□ -0.76
SCAF8-203ENST00000417268 GAGE2DQ9UEU5 116 aa10.33□□□□□ -0.76
SCAF8-203ENST00000417268 DAZAP2Q15038 168 aaPredicted RBP10.33□□□□□ -0.76
SCAF8-203ENST00000417268 DUX4L9Q6RFH8 374 aaPredicted RBP10.33□□□□□ -0.76
SCAF8-203ENST00000417268 FREM1Q5H8C1 2179 aa10.33□□□□□ -0.76
SCAF8-203ENST00000417268 KIR2DL5BA0A0G2JN68 375 aa10.33□□□□□ -0.76
SCAF8-203ENST00000417268 KIR2DL5BA0A0G2JPC4 375 aa10.33□□□□□ -0.76
SCAF8-203ENST00000417268 TCRAP04437 139 aa10.33□□□□□ -0.76
SCAF8-203ENST00000417268 MEIG1Q5JSS6 88 aa10.33□□□□□ -0.76
SCAF8-203ENST00000417268 ZFAND6Q6FIF0 208 aa10.33□□□□□ -0.76
SCAF8-203ENST00000417268 KIR2DL5AQ8N109 375 aa10.33□□□□□ -0.76
SCAF8-203ENST00000417268 KIR3DL3Q8N743 410 aa10.33□□□□□ -0.76
SCAF8-203ENST00000417268 PPP1R17O96001 155 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 SRSF1Q07955 248 aaKnown RBP eCLIP10.32□□□□□ -0.76
SCAF8-203ENST00000417268 TMEM95Q3KNT9 176 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 SLC25A2Q9BXI2 301 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 PTPN13Q12923 2485 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 TLN1Q9Y490 2541 aaKnown RBP10.32□□□□□ -0.76
SCAF8-203ENST00000417268 NDUFS7O75251 213 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms