RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 C2CD4CQ8TF44 421 aa12.98□□□□□ -0.33
CALD1-204ENST00000417172 WIPF2Q8TF74 440 aaPredicted RBP12.98□□□□□ -0.33
CALD1-204ENST00000417172 DUX3Q96PT4 197 aa12.98□□□□□ -0.33
CALD1-204ENST00000417172 U3KQE9 123 aa12.98□□□□□ -0.33
CALD1-204ENST00000417172 HAX1O00165 279 aa12.97□□□□□ -0.33
CALD1-204ENST00000417172 RPL7P18124 248 aaKnown RBP12.97□□□□□ -0.33
CALD1-204ENST00000417172 ADIRFQ15847 76 aa12.97□□□□□ -0.33
CALD1-204ENST00000417172 TMEM241Q24JQ0 296 aa12.97□□□□□ -0.33
CALD1-204ENST00000417172 SIGLEC15Q6ZMC9 328 aa12.97□□□□□ -0.33
CALD1-204ENST00000417172 SGK494Q96LW2 274 aa12.97□□□□□ -0.33
CALD1-204ENST00000417172 NAT8Q9UHE5 227 aa12.97□□□□□ -0.33
CALD1-204ENST00000417172 TRAV34A0A0B4J273 112 aa12.96□□□□□ -0.33
CALD1-204ENST00000417172 RPL23P62829 140 aaKnown RBP12.96□□□□□ -0.33
CALD1-204ENST00000417172 RPEL1Q2QD12 228 aa12.96□□□□□ -0.33
CALD1-204ENST00000417172 PCP4L1A6NKN8 68 aa12.96□□□□□ -0.34
CALD1-204ENST00000417172 DNASE2O00115 360 aaPredicted RBP12.96□□□□□ -0.34
CALD1-204ENST00000417172 PEX7O00628 323 aa12.96□□□□□ -0.34
CALD1-204ENST00000417172 CD28P10747 220 aa12.96□□□□□ -0.34
CALD1-204ENST00000417172 EPDR1Q9UM22 224 aa12.96□□□□□ -0.34
CALD1-204ENST00000417172 NIPBLQ6KC79 2804 aaeCLIP12.95□□□□□ -0.34
CALD1-204ENST00000417172 M0R3E3 92 aa12.95□□□□□ -0.34
CALD1-204ENST00000417172 TSPAN4O14817 238 aa12.95□□□□□ -0.34
CALD1-204ENST00000417172 HLA-DMBP28068 263 aa12.95□□□□□ -0.34
CALD1-204ENST00000417172 FLI1Q01543 452 aaPredicted RBP12.95□□□□□ -0.34
CALD1-204ENST00000417172 C16orf95Q9H693 158 aa12.95□□□□□ -0.34
CALD1-204ENST00000417172 C2CD3Q4AC94 2353 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 CRLF1O75462 422 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 OTORQ9NRC9 128 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 A0A1W2PRX2 142 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 HELTA6NFD8 242 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 ZNF785A8K8V0 405 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 HOXD3P31249 432 aaPredicted RBP12.94□□□□□ -0.34
CALD1-204ENST00000417172 SLURP1P55000 103 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 SYNJ2BPP57105 145 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 CENPWQ5EE01 88 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 C16orf54Q6UWD8 224 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 LINC01551Q86U37 167 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 GPHB5Q86YW7 130 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 C5orf17Q8NAS9 161 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 KLHL30-AS1Q8NEE0 82 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 GLMPQ8WWB7 406 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 JMJD8Q96S16 334 aa12.94□□□□□ -0.34
CALD1-204ENST00000417172 DAZ1Q9NQZ3 744 aaKnown RBP12.94□□□□□ -0.34
CALD1-204ENST00000417172 ISLRO14498 428 aa12.93□□□□□ -0.34
CALD1-204ENST00000417172 TCF21O43680 179 aa12.93□□□□□ -0.34
CALD1-204ENST00000417172 CDX1P47902 265 aaPredicted RBP12.93□□□□□ -0.34
CALD1-204ENST00000417172 SSTP61278 116 aa12.93□□□□□ -0.34
CALD1-204ENST00000417172 RHEBQ15382 184 aa12.93□□□□□ -0.34
CALD1-204ENST00000417172 FAM106AQ4KMX7 169 aa12.93□□□□□ -0.34
CALD1-204ENST00000417172 NHLRC2Q8NBF2 726 aa12.93□□□□□ -0.34
CALD1-204ENST00000417172 TRAV8-1A0A0A6YYK1 113 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 IGHV7-4-1A0A0J9YVY3 117 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 K7EN84 100 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 TCRAP04437 139 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 BTF3P20290 206 aaKnown RBP12.92□□□□□ -0.34
CALD1-204ENST00000417172 C1orf194Q5T5A4 169 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 C8orf86Q6ZUL3 223 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 OCC1Q8TAD7 63 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 C4orf3Q8WVX3 66 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 ISOC2Q96AB3 205 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 RNF24Q9Y225 148 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 TEP1Q99973 2627 aaKnown RBP12.92□□□□□ -0.34
CALD1-204ENST00000417172 WNK1Q9H4A3 2382 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 TMEM213A2RRL7 107 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 S100A7P31151 101 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 GALR1P47211 349 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 PNRC1Q12796 327 aaPredicted RBP12.92□□□□□ -0.34
CALD1-204ENST00000417172 PDE6HQ13956 83 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 GOLT1AQ6ZVE7 132 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 RNF182Q8N6D2 247 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 OR11H1Q8NG94 326 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 IGF2BP2-AS1Q96M15 143 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 ASCL2Q99929 193 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 RHPN1-AS1Q9BWJ2 59 aa12.92□□□□□ -0.34
CALD1-204ENST00000417172 IGKV3-7A0A075B6H7 116 aa12.91□□□□□ -0.34
CALD1-204ENST00000417172 GNG4P50150 75 aa12.91□□□□□ -0.34
CALD1-204ENST00000417172 RNF212Q495C1 297 aa12.91□□□□□ -0.34
CALD1-204ENST00000417172 CMTM2Q8TAZ6 248 aa12.91□□□□□ -0.34
CALD1-204ENST00000417172 HIST1H2BAQ96A08 127 aa12.91□□□□□ -0.34
CALD1-204ENST00000417172 CITED2Q99967 270 aaPredicted RBP12.91□□□□□ -0.34
CALD1-204ENST00000417172 ATG101Q9BSB4 218 aa12.91□□□□□ -0.34
CALD1-204ENST00000417172 RNF114Q9Y508 228 aa12.91□□□□□ -0.34
CALD1-204ENST00000417172 A0A087X0K7 114 aa12.9□□□□□ -0.34
CALD1-204ENST00000417172 ZNF705FA8MVS1 300 aaPredicted RBP12.9□□□□□ -0.34
CALD1-204ENST00000417172 CHEK1O14757 476 aa12.9□□□□□ -0.34
CALD1-204ENST00000417172 NDUFA7O95182 113 aa12.9□□□□□ -0.34
CALD1-204ENST00000417172 CNN1P51911 297 aaKnown RBP12.9□□□□□ -0.34
CALD1-204ENST00000417172 GPR82Q96P67 336 aa12.9□□□□□ -0.34
CALD1-204ENST00000417172 ZNF331Q9NQX6 463 aaPredicted RBP12.9□□□□□ -0.34
CALD1-204ENST00000417172 IGLV2-8P01709 118 aa12.9□□□□□ -0.35
CALD1-204ENST00000417172 OR5I1Q13606 314 aa12.9□□□□□ -0.35
CALD1-204ENST00000417172 LYPD1Q8N2G4 141 aa12.9□□□□□ -0.35
CALD1-204ENST00000417172 AAMDCQ9H7C9 122 aa12.9□□□□□ -0.35
CALD1-204ENST00000417172 SMPXQ9UHP9 88 aa12.9□□□□□ -0.35
CALD1-204ENST00000417172 C9JCJ5 164 aa12.89□□□□□ -0.35
CALD1-204ENST00000417172 TRAV8-2A0A0B4J237 113 aa12.88□□□□□ -0.35
CALD1-204ENST00000417172 LINC01619G3V211 115 aa12.88□□□□□ -0.35
CALD1-204ENST00000417172 PROK1P58294 105 aa12.88□□□□□ -0.35
CALD1-204ENST00000417172 PSG9Q00887 426 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms