RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 K7EP13 123 aa9.76□□□□□ -0.85
UBR4-205ENST00000417040 ZNF672Q499Z4 452 aaPredicted RBP9.76□□□□□ -0.85
UBR4-205ENST00000417040 KNCNA6PVL3 124 aa9.75□□□□□ -0.85
UBR4-205ENST00000417040 H3BMM0 161 aa9.75□□□□□ -0.85
UBR4-205ENST00000417040 IGLV3-19P01714 112 aa9.75□□□□□ -0.85
UBR4-205ENST00000417040 MORN5Q5VZ52 161 aa9.75□□□□□ -0.85
UBR4-205ENST00000417040 UBE2WQ96B02 151 aa9.75□□□□□ -0.85
UBR4-205ENST00000417040 C10orf91Q5T1B1 145 aa9.75□□□□□ -0.85
UBR4-205ENST00000417040 LEPROTO15243 131 aa9.75□□□□□ -0.85
UBR4-205ENST00000417040 PLSCR4Q9NRQ2 329 aa9.75□□□□□ -0.85
UBR4-205ENST00000417040 TP53TG1Q9Y2A0 90 aa9.75□□□□□ -0.85
UBR4-205ENST00000417040 V9GYV3 84 aa9.75□□□□□ -0.85
UBR4-205ENST00000417040 SIGLEC9Q9Y336 463 aa9.75□□□□□ -0.85
UBR4-205ENST00000417040 IGHV3-16A0A0C4DH30 117 aa9.75□□□□□ -0.85
UBR4-205ENST00000417040 ETDBQ3ZM63 59 aa9.75□□□□□ -0.85
UBR4-205ENST00000417040 BVES-AS1Q5T3Y7 98 aa9.74□□□□□ -0.85
UBR4-205ENST00000417040 LINC01549A6NIU2 74 aa9.74□□□□□ -0.85
UBR4-205ENST00000417040 INS-IGF2F8WCM5 200 aa9.74□□□□□ -0.85
UBR4-205ENST00000417040 INSP01308 110 aa9.74□□□□□ -0.85
UBR4-205ENST00000417040 AZU1P20160 251 aa9.74□□□□□ -0.85
UBR4-205ENST00000417040 K7EP34 96 aa9.74□□□□□ -0.85
UBR4-205ENST00000417040 DUX4L9Q6RFH8 374 aaPredicted RBP9.74□□□□□ -0.85
UBR4-205ENST00000417040 H3BMG7 143 aa9.74□□□□□ -0.85
UBR4-205ENST00000417040 RS1O15537 224 aa9.74□□□□□ -0.85
UBR4-205ENST00000417040 CFHR3Q02985 330 aa9.74□□□□□ -0.85
UBR4-205ENST00000417040 RASL10AQ92737 203 aa9.74□□□□□ -0.85
UBR4-205ENST00000417040 PRSS22Q9GZN4 317 aa9.74□□□□□ -0.85
UBR4-205ENST00000417040 BRWD3Q6RI45 1802 aa9.73□□□□□ -0.85
UBR4-205ENST00000417040 MRPL51Q4U2R6 128 aaKnown RBP9.73□□□□□ -0.85
UBR4-205ENST00000417040 MRAPQ8TCY5 172 aa9.73□□□□□ -0.85
UBR4-205ENST00000417040 KLF2Q9Y5W3 355 aaPredicted RBP9.73□□□□□ -0.85
UBR4-205ENST00000417040 MYMXA0A1B0GTQ4 84 aa9.73□□□□□ -0.85
UBR4-205ENST00000417040 COL8A2P25067 703 aa9.73□□□□□ -0.85
UBR4-205ENST00000417040 KLK9Q9UKQ9 250 aa9.73□□□□□ -0.85
UBR4-205ENST00000417040 COL4A6Q14031 1691 aa9.73□□□□□ -0.85
UBR4-205ENST00000417040 GFRA4Q9GZZ7 299 aa9.73□□□□□ -0.85
UBR4-205ENST00000417040 A0A1W2PPI3 338 aa9.73□□□□□ -0.85
UBR4-205ENST00000417040 AMTNQ6UX39 209 aa9.73□□□□□ -0.85
UBR4-205ENST00000417040 SMIM27A0A1W2PRY6 76 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 PRB1P04280 392 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 PRIMA1Q86XR5 153 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 TRPM7Q96QT4 1865 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 SCN5AQ14524 2016 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 TRBV6-6A0A0A6YYG2 114 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 VWC2LB2RUY7 222 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 SAP30O75446 220 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 IGKV1-39P01597 117 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 IGKV1D-39P04432 117 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 CEND1Q8N111 149 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 A0A1W2PPM0 123 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 ZFP36L1Q07352 338 aaKnown RBP9.72□□□□□ -0.85
UBR4-205ENST00000417040 ZNF524Q96C55 264 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 TET1Q8NFU7 2136 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 K7EMI3 77 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 B3GALT5-AS1P59052 145 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 C6orf226Q5I0X4 101 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 SS18L2Q9UHA2 77 aa9.72□□□□□ -0.85
UBR4-205ENST00000417040 K7EN84 100 aa9.71□□□□□ -0.85
UBR4-205ENST00000417040 SEC16AO15027 2179 aa9.71□□□□□ -0.85
UBR4-205ENST00000417040 LY6DQ14210 128 aa9.71□□□□□ -0.85
UBR4-205ENST00000417040 PRADC1Q9BSG0 188 aa9.71□□□□□ -0.85
UBR4-205ENST00000417040 IGHV3-38A0A0C4DH36 116 aa9.71□□□□□ -0.85
UBR4-205ENST00000417040 C5orf64Q2M2E5 130 aa9.71□□□□□ -0.85
UBR4-205ENST00000417040 TMEM75Q8N9X5 138 aa9.71□□□□□ -0.85
UBR4-205ENST00000417040 SHANK2-AS3Q9BTD1 123 aa9.71□□□□□ -0.85
UBR4-205ENST00000417040 MSRB2Q9Y3D2 182 aa9.71□□□□□ -0.85
UBR4-205ENST00000417040 LRRK1Q38SD2 2015 aa9.71□□□□□ -0.86
UBR4-205ENST00000417040 LINC01559Q495D7 138 aa9.71□□□□□ -0.86
UBR4-205ENST00000417040 GAGE12HA6NDE8 117 aa9.71□□□□□ -0.86
UBR4-205ENST00000417040 COX8AP10176 69 aa9.71□□□□□ -0.86
UBR4-205ENST00000417040 RNASE13Q5GAN3 156 aaKnown RBP9.71□□□□□ -0.86
UBR4-205ENST00000417040 VGLL1Q99990 258 aa9.71□□□□□ -0.86
UBR4-205ENST00000417040 DKK2Q9UBU2 259 aa9.71□□□□□ -0.86
UBR4-205ENST00000417040 SLX1AQ9BQ83 275 aa9.7□□□□□ -0.86
UBR4-205ENST00000417040 ZC2HC1AQ96GY0 325 aa9.7□□□□□ -0.86
UBR4-205ENST00000417040 ATP6V0BQ99437 205 aa9.7□□□□□ -0.86
UBR4-205ENST00000417040 SIGLEC8Q9NYZ4 499 aa9.7□□□□□ -0.86
UBR4-205ENST00000417040 TRBV7-1A0A0A6YYK4 115 aa9.7□□□□□ -0.86
UBR4-205ENST00000417040 ANXA2RQ3ZCQ2 193 aa9.7□□□□□ -0.86
UBR4-205ENST00000417040 FAM104BQ5XKR9 115 aa9.7□□□□□ -0.86
UBR4-205ENST00000417040 IFITM1P13164 125 aa9.7□□□□□ -0.86
UBR4-205ENST00000417040 FGF6P10767 208 aa9.7□□□□□ -0.86
UBR4-205ENST00000417040 HLA-DRB4P13762 266 aa9.7□□□□□ -0.86
UBR4-205ENST00000417040 EFNA4P52798 201 aa9.7□□□□□ -0.86
UBR4-205ENST00000417040 HLA-DRB4X5D2U9 266 aa9.7□□□□□ -0.86
UBR4-205ENST00000417040 H3BUX3 64 aa9.69□□□□□ -0.86
UBR4-205ENST00000417040 RUSC1-AS1Q66K80 236 aa9.69□□□□□ -0.86
UBR4-205ENST00000417040 A0A0G2JNJ9 132 aa9.69□□□□□ -0.86
UBR4-205ENST00000417040 PRSS46E5RG02 174 aa9.69□□□□□ -0.86
UBR4-205ENST00000417040 RPL36AP83881 106 aaKnown RBP9.69□□□□□ -0.86
UBR4-205ENST00000417040 RPL36ALQ969Q0 106 aaKnown RBP9.69□□□□□ -0.86
UBR4-205ENST00000417040 Q9UFV3 132 aa9.69□□□□□ -0.86
UBR4-205ENST00000417040 PFN2P35080 140 aa9.69□□□□□ -0.86
UBR4-205ENST00000417040 RHPN1-AS1Q9BWJ2 59 aa9.69□□□□□ -0.86
UBR4-205ENST00000417040 CCL25O15444 150 aa9.69□□□□□ -0.86
UBR4-205ENST00000417040 TPSG1Q9NRR2 321 aa9.69□□□□□ -0.86
UBR4-205ENST00000417040 PHF3Q92576 2039 aaKnown RBP9.68□□□□□ -0.86
UBR4-205ENST00000417040 TRAV12-2A0A075B6T6 113 aa9.68□□□□□ -0.86
UBR4-205ENST00000417040 TRAV12-1A0A0B4J245 112 aa9.68□□□□□ -0.86
UBR4-205ENST00000417040 F8W1H4 67 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms