RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 TRAV8-2A0A0B4J237 113 aa22.68■■□□□ 1.22
CSNK1E-206ENST00000413574 TPT1P13693 172 aaKnown RBP22.68■■□□□ 1.22
CSNK1E-206ENST00000413574 SNRPD3P62318 126 aaKnown RBP22.68■■□□□ 1.22
CSNK1E-206ENST00000413574 STOML3Q8TAV4 291 aa22.68■■□□□ 1.22
CSNK1E-206ENST00000413574 C20orf173Q96LM9 149 aa22.68■■□□□ 1.22
CSNK1E-206ENST00000413574 OR51M1Q9H341 326 aa22.68■■□□□ 1.22
CSNK1E-206ENST00000413574 TUBA4BQ9H853 241 aa22.68■■□□□ 1.22
CSNK1E-206ENST00000413574 SLC17A3O00476 420 aa22.68■■□□□ 1.22
CSNK1E-206ENST00000413574 ISLRO14498 428 aa22.68■■□□□ 1.22
CSNK1E-206ENST00000413574 OR7C2O60412 319 aa22.68■■□□□ 1.22
CSNK1E-206ENST00000413574 OR10J4P0C629 311 aa22.68■■□□□ 1.22
CSNK1E-206ENST00000413574 CDC34P49427 236 aaPredicted RBP22.68■■□□□ 1.22
CSNK1E-206ENST00000413574 DEFB1P60022 68 aa22.68■■□□□ 1.22
CSNK1E-206ENST00000413574 RNF182Q8N6D2 247 aa22.68■■□□□ 1.22
CSNK1E-206ENST00000413574 AGRNO00468 2067 aa22.67■■□□□ 1.22
CSNK1E-206ENST00000413574 HLA-DMBP28068 263 aa22.67■■□□□ 1.22
CSNK1E-206ENST00000413574 ID1P41134 155 aa22.67■■□□□ 1.22
CSNK1E-206ENST00000413574 PSMB3P49720 205 aa22.67■■□□□ 1.22
CSNK1E-206ENST00000413574 CMC4P56277 68 aaPredicted RBP22.67■■□□□ 1.22
CSNK1E-206ENST00000413574 EIF5AP63241 154 aaKnown RBP22.67■■□□□ 1.22
CSNK1E-206ENST00000413574 AKR1C8PQ5T2L2 129 aa22.67■■□□□ 1.22
CSNK1E-206ENST00000413574 SSX7Q7RTT5 188 aa22.67■■□□□ 1.22
CSNK1E-206ENST00000413574 LRRC20Q8TCA0 184 aa22.67■■□□□ 1.22
CSNK1E-206ENST00000413574 PAXXQ9BUH6 204 aa22.67■■□□□ 1.22
CSNK1E-206ENST00000413574 BOLA1Q9Y3E2 137 aa22.67■■□□□ 1.22
CSNK1E-206ENST00000413574 SEC11BP0C7V7 166 aa22.66■■□□□ 1.22
CSNK1E-206ENST00000413574 TMED6Q8WW62 240 aa22.66■■□□□ 1.22
CSNK1E-206ENST00000413574 RAB24Q969Q5 203 aa22.66■■□□□ 1.22
CSNK1E-206ENST00000413574 FRMD6-AS1P0C7T7 363 aa22.65■■□□□ 1.22
CSNK1E-206ENST00000413574 HIST1H1EP10412 219 aaKnown RBP22.65■■□□□ 1.22
CSNK1E-206ENST00000413574 TAS2R45P59539 299 aa22.65■■□□□ 1.22
CSNK1E-206ENST00000413574 KHDC3LQ587J8 217 aa22.65■■□□□ 1.22
CSNK1E-206ENST00000413574 BLNKQ8WV28 456 aa22.65■■□□□ 1.22
CSNK1E-206ENST00000413574 FXYD5Q96DB9 178 aa22.65■■□□□ 1.22
CSNK1E-206ENST00000413574 SAT2Q96F10 170 aaPredicted RBP22.65■■□□□ 1.22
CSNK1E-206ENST00000413574 ZNF726P1Q15940 193 aa22.64■■□□□ 1.22
CSNK1E-206ENST00000413574 LCN15Q6UWW0 184 aa22.64■■□□□ 1.22
CSNK1E-206ENST00000413574 SLC51BQ86UW2 128 aa22.64■■□□□ 1.22
CSNK1E-206ENST00000413574 RNF141Q8WVD5 230 aa22.64■■□□□ 1.22
CSNK1E-206ENST00000413574 ACTR3CQ9C0K3 210 aaPredicted RBP22.64■■□□□ 1.22
CSNK1E-206ENST00000413574 KNCNA6PVL3 124 aa22.64■■□□□ 1.21
CSNK1E-206ENST00000413574 PRB4P10163 310 aaPredicted RBP22.64■■□□□ 1.21
CSNK1E-206ENST00000413574 ZNF331Q9NQX6 463 aaPredicted RBP22.64■■□□□ 1.21
CSNK1E-206ENST00000413574 TRBV19A0A075B6N1 114 aa22.63■■□□□ 1.21
CSNK1E-206ENST00000413574 RBMY1BA6NDE4 496 aaKnown RBP22.63■■□□□ 1.21
CSNK1E-206ENST00000413574 RBMY1EA6NEQ0 496 aaKnown RBP22.63■■□□□ 1.21
CSNK1E-206ENST00000413574 BOLA2-SMG1P6H3BVE0 249 aa22.63■■□□□ 1.21
CSNK1E-206ENST00000413574 RBMY1DP0C7P1 496 aaKnown RBP22.63■■□□□ 1.21
CSNK1E-206ENST00000413574 SAMD13Q5VXD3 122 aa22.63■■□□□ 1.21
CSNK1E-206ENST00000413574 A8MZ25 164 aa22.62■■□□□ 1.21
CSNK1E-206ENST00000413574 FHITP49789 147 aa22.62■■□□□ 1.21
CSNK1E-206ENST00000413574 GUK1Q16774 197 aa22.62■■□□□ 1.21
CSNK1E-206ENST00000413574 NDUFB4O95168 129 aa22.61■■□□□ 1.21
CSNK1E-206ENST00000413574 NBEAP1P0C6P0 100 aa22.61■■□□□ 1.21
CSNK1E-206ENST00000413574 UBE2L3P68036 154 aaKnown RBP22.61■■□□□ 1.21
CSNK1E-206ENST00000413574 DNAH9Q9NYC9 4486 aa22.61■■□□□ 1.21
CSNK1E-206ENST00000413574 STAG3L2P0CL84 134 aa22.6■■□□□ 1.21
CSNK1E-206ENST00000413574 STAG3L3P0CL85 134 aa22.6■■□□□ 1.21
CSNK1E-206ENST00000413574 ARL14EPLP0DKL9 152 aa22.6■■□□□ 1.21
CSNK1E-206ENST00000413574 C4BPBP20851 252 aa22.6■■□□□ 1.21
CSNK1E-206ENST00000413574 ACTL10Q5JWF8 245 aa22.6■■□□□ 1.21
CSNK1E-206ENST00000413574 GDF5OSQ5U4N7 250 aa22.6■■□□□ 1.21
CSNK1E-206ENST00000413574 SLC50A1Q9BRV3 221 aa22.6■■□□□ 1.21
CSNK1E-206ENST00000413574 F6UB75 175 aa22.59■■□□□ 1.21
CSNK1E-206ENST00000413574 PQLC2Q6ZP29 291 aa22.59■■□□□ 1.21
CSNK1E-206ENST00000413574 RPL35AP18077 110 aaKnown RBP22.58■■□□□ 1.21
CSNK1E-206ENST00000413574 LINC00322Q6ZN03 302 aaPredicted RBP22.58■■□□□ 1.21
CSNK1E-206ENST00000413574 PHYHIPLQ96FC7 376 aa22.58■■□□□ 1.21
CSNK1E-206ENST00000413574 CTXND1A0A1B0GTU2 59 aa22.57■■□□□ 1.2
CSNK1E-206ENST00000413574 PSG3Q16557 428 aa22.57■■□□□ 1.2
CSNK1E-206ENST00000413574 EXOC3-AS1Q8N2X6 119 aa22.57■■□□□ 1.2
CSNK1E-206ENST00000413574 ZNF738Q8NE65 137 aa22.57■■□□□ 1.2
CSNK1E-206ENST00000413574 ASCL2Q99929 193 aa22.57■■□□□ 1.2
CSNK1E-206ENST00000413574 ZNF705FA8MVS1 300 aaPredicted RBP22.56■■□□□ 1.2
CSNK1E-206ENST00000413574 UMAD1C9J7I0 102 aa22.56■■□□□ 1.2
CSNK1E-206ENST00000413574 FAM213BQ8TBF2 198 aa22.56■■□□□ 1.2
CSNK1E-206ENST00000413574 LOC102724200A0A096LPH7 203 aaPredicted RBP22.55■■□□□ 1.2
CSNK1E-206ENST00000413574 ZNF253O75346 499 aa22.55■■□□□ 1.2
CSNK1E-206ENST00000413574 FGF8P55075 233 aaPredicted RBP22.55■■□□□ 1.2
CSNK1E-206ENST00000413574 PDE6HQ13956 83 aa22.55■■□□□ 1.2
CSNK1E-206ENST00000413574 STHQ8IWL8 128 aa22.55■■□□□ 1.2
CSNK1E-206ENST00000413574 ZNF705DP0CH99 300 aaPredicted RBP22.54■■□□□ 1.2
CSNK1E-206ENST00000413574 ZNF705BP0CI00 300 aaPredicted RBP22.54■■□□□ 1.2
CSNK1E-206ENST00000413574 GCHFRP30047 84 aa22.54■■□□□ 1.2
CSNK1E-206ENST00000413574 SBSPONQ8IVN8 264 aa22.54■■□□□ 1.2
CSNK1E-206ENST00000413574 SAV1Q9H4B6 383 aaPredicted RBP22.54■■□□□ 1.2
CSNK1E-206ENST00000413574 RANP62826 216 aaKnown RBP22.53■■□□□ 1.2
CSNK1E-206ENST00000413574 EIF5AL1Q6IS14 154 aaKnown RBP22.53■■□□□ 1.2
CSNK1E-206ENST00000413574 COL7A1Q02388 2944 aa22.53■■□□□ 1.2
CSNK1E-206ENST00000413574 M0R3E3 92 aa22.53■■□□□ 1.2
CSNK1E-206ENST00000413574 CXorf1O96002 111 aa22.53■■□□□ 1.2
CSNK1E-206ENST00000413574 PSG9Q00887 426 aa22.53■■□□□ 1.2
CSNK1E-206ENST00000413574 FOXI2Q6ZQN5 318 aa22.53■■□□□ 1.2
CSNK1E-206ENST00000413574 TMPRSS5Q9H3S3 457 aa22.53■■□□□ 1.2
CSNK1E-206ENST00000413574 MAP1LC3B2A6NCE7 125 aa22.52■■□□□ 1.2
CSNK1E-206ENST00000413574 PRAC2D3DTV9 90 aa22.52■■□□□ 1.2
CSNK1E-206ENST00000413574 H3BMM0 161 aa22.52■■□□□ 1.2
CSNK1E-206ENST00000413574 HAGHQ16775 308 aa22.52■■□□□ 1.2
CSNK1E-206ENST00000413574 TRPT1Q86TN4 253 aaKnown RBP22.52■■□□□ 1.2
CSNK1E-206ENST00000413574 IQCF2Q8IXL9 164 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms