RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 A0A1W2PPQ1 181 aa13.25□□□□□ -0.29
PTPRC-206ENST00000413409 IGLV2-8P01709 118 aa13.25□□□□□ -0.29
PTPRC-206ENST00000413409 TRGC2P03986 189 aa13.25□□□□□ -0.29
PTPRC-206ENST00000413409 SNRPEP62304 92 aaKnown RBP13.25□□□□□ -0.29
PTPRC-206ENST00000413409 Q6YL49 198 aa13.25□□□□□ -0.29
PTPRC-206ENST00000413409 PIFOQ8TCI5 191 aa13.25□□□□□ -0.29
PTPRC-206ENST00000413409 GAR1Q9NY12 217 aaKnown RBP13.25□□□□□ -0.29
PTPRC-206ENST00000413409 SACSQ9NZJ4 4579 aa13.25□□□□□ -0.29
PTPRC-206ENST00000413409 TRBV9A0A0B4J1U6 114 aa13.24□□□□□ -0.29
PTPRC-206ENST00000413409 ISLRO14498 428 aa13.24□□□□□ -0.29
PTPRC-206ENST00000413409 IL4P05112 153 aa13.24□□□□□ -0.29
PTPRC-206ENST00000413409 S100A7P31151 101 aa13.24□□□□□ -0.29
PTPRC-206ENST00000413409 ECSCRQ19T08 205 aa13.24□□□□□ -0.29
PTPRC-206ENST00000413409 BPIFA4PQ86YQ2 179 aa13.24□□□□□ -0.29
PTPRC-206ENST00000413409 ATP6V0BQ99437 205 aa13.24□□□□□ -0.29
PTPRC-206ENST00000413409 ATG101Q9BSB4 218 aa13.24□□□□□ -0.29
PTPRC-206ENST00000413409 IL36BQ9NZH7 164 aa13.24□□□□□ -0.29
PTPRC-206ENST00000413409 EPDR1Q9UM22 224 aa13.24□□□□□ -0.29
PTPRC-206ENST00000413409 KLF12Q9Y4X4 402 aa13.24□□□□□ -0.29
PTPRC-206ENST00000413409 HIST1H2BKO60814 126 aa13.23□□□□□ -0.29
PTPRC-206ENST00000413409 SLC25A5P05141 298 aaKnown RBP13.23□□□□□ -0.29
PTPRC-206ENST00000413409 HIST1H2BJP06899 126 aa13.23□□□□□ -0.29
PTPRC-206ENST00000413409 HIST1H2BOP23527 126 aa13.23□□□□□ -0.29
PTPRC-206ENST00000413409 HIST1H2BBP33778 126 aa13.23□□□□□ -0.29
PTPRC-206ENST00000413409 HIST1H2BDP58876 126 aa13.23□□□□□ -0.29
PTPRC-206ENST00000413409 HIST1H2BCP62807 126 aa13.23□□□□□ -0.29
PTPRC-206ENST00000413409 HIST2H2BEQ16778 126 aa13.23□□□□□ -0.29
PTPRC-206ENST00000413409 TMEM183BQ1AE95 376 aa13.23□□□□□ -0.29
PTPRC-206ENST00000413409 C19orf54Q5BKX5 351 aa13.23□□□□□ -0.29
PTPRC-206ENST00000413409 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.23□□□□□ -0.29
PTPRC-206ENST00000413409 OR4F17Q8NGA8 305 aa13.23□□□□□ -0.29
PTPRC-206ENST00000413409 ZNF502Q8TBZ5 544 aa13.23□□□□□ -0.29
PTPRC-206ENST00000413409 BLNKQ8WV28 456 aa13.23□□□□□ -0.29
PTPRC-206ENST00000413409 HIST1H2BHQ93079 126 aa13.23□□□□□ -0.29
PTPRC-206ENST00000413409 HIST1H2BNQ99877 126 aa13.23□□□□□ -0.29
PTPRC-206ENST00000413409 HIST1H2BMQ99879 126 aa13.23□□□□□ -0.29
PTPRC-206ENST00000413409 Q9H3A6 140 aa13.23□□□□□ -0.29
PTPRC-206ENST00000413409 PGPA6NDG6 321 aa13.22□□□□□ -0.29
PTPRC-206ENST00000413409 A6NDX4 124 aa13.22□□□□□ -0.29
PTPRC-206ENST00000413409 M0QZK8 103 aa13.22□□□□□ -0.29
PTPRC-206ENST00000413409 IGLC2P0DOY2 106 aa13.22□□□□□ -0.29
PTPRC-206ENST00000413409 RANP62826 216 aaKnown RBP13.22□□□□□ -0.29
PTPRC-206ENST00000413409 OXLD1Q5BKU9 147 aa13.22□□□□□ -0.29
PTPRC-206ENST00000413409 LEMD1Q68G75 181 aa13.22□□□□□ -0.29
PTPRC-206ENST00000413409 FAM231DQ6ZW35 169 aa13.22□□□□□ -0.29
PTPRC-206ENST00000413409 LYPD1Q8N2G4 141 aa13.22□□□□□ -0.29
PTPRC-206ENST00000413409 V9GYV3 84 aa13.22□□□□□ -0.29
PTPRC-206ENST00000413409 TENM2Q9NT68 2774 aa13.22□□□□□ -0.29
PTPRC-206ENST00000413409 MRPS12O15235 138 aaKnown RBP13.21□□□□□ -0.29
PTPRC-206ENST00000413409 ERVFC1-1P60608 527 aa13.21□□□□□ -0.29
PTPRC-206ENST00000413409 RHOGP84095 191 aa13.21□□□□□ -0.29
PTPRC-206ENST00000413409 FABP9Q0Z7S8 132 aa13.21□□□□□ -0.29
PTPRC-206ENST00000413409 USF2Q15853 346 aaPredicted RBP13.21□□□□□ -0.29
PTPRC-206ENST00000413409 ACTL10Q5JWF8 245 aa13.21□□□□□ -0.29
PTPRC-206ENST00000413409 TMEM86BQ8N661 226 aa13.21□□□□□ -0.29
PTPRC-206ENST00000413409 FRZBQ92765 325 aa13.21□□□□□ -0.29
PTPRC-206ENST00000413409 FMC1Q96HJ9 113 aa13.21□□□□□ -0.29
PTPRC-206ENST00000413409 ZNF586Q9NXT0 402 aa13.21□□□□□ -0.29
PTPRC-206ENST00000413409 TRBV19A0A075B6N1 114 aa13.2□□□□□ -0.3
PTPRC-206ENST00000413409 TRBV6-1A0A0K0K1D8 114 aa13.2□□□□□ -0.3
PTPRC-206ENST00000413409 ZNF98A6NK75 572 aa13.2□□□□□ -0.3
PTPRC-206ENST00000413409 BRI3O95415 125 aa13.2□□□□□ -0.3
PTPRC-206ENST00000413409 AMY1AP04745 511 aa13.2□□□□□ -0.3
PTPRC-206ENST00000413409 S100A8P05109 93 aa13.2□□□□□ -0.3
PTPRC-206ENST00000413409 TRGC1P0CF51 173 aa13.2□□□□□ -0.3
PTPRC-206ENST00000413409 HOXA5P20719 270 aa13.2□□□□□ -0.3
PTPRC-206ENST00000413409 AKR1D1P51857 326 aa13.2□□□□□ -0.3
PTPRC-206ENST00000413409 UBE2G1P62253 170 aa13.2□□□□□ -0.3
PTPRC-206ENST00000413409 PDE6HQ13956 83 aa13.2□□□□□ -0.3
PTPRC-206ENST00000413409 RPEL1Q2QD12 228 aa13.2□□□□□ -0.3
PTPRC-206ENST00000413409 C15orf32Q32M92 178 aa13.2□□□□□ -0.3
PTPRC-206ENST00000413409 TMEM219Q86XT9 240 aa13.2□□□□□ -0.3
PTPRC-206ENST00000413409 PITPNC1Q9UKF7 332 aa13.2□□□□□ -0.3
PTPRC-206ENST00000413409 S4R3C0 116 aa13.2□□□□□ -0.3
PTPRC-206ENST00000413409 OR2T8A6NH00 312 aa13.19□□□□□ -0.3
PTPRC-206ENST00000413409 TCRAP04437 139 aa13.19□□□□□ -0.3
PTPRC-206ENST00000413409 CTSGP08311 255 aa13.19□□□□□ -0.3
PTPRC-206ENST00000413409 GNG5P63218 68 aa13.19□□□□□ -0.3
PTPRC-206ENST00000413409 OR5I1Q13606 314 aa13.19□□□□□ -0.3
PTPRC-206ENST00000413409 Q6ZSV7 163 aa13.19□□□□□ -0.3
PTPRC-206ENST00000413409 BAGE2Q86Y30 109 aa13.19□□□□□ -0.3
PTPRC-206ENST00000413409 LINC00518Q8N0U6 118 aa13.19□□□□□ -0.3
PTPRC-206ENST00000413409 EEF1AKMT3Q96AZ1 226 aa13.19□□□□□ -0.3
PTPRC-206ENST00000413409 WWC2-AS2Q96NR7 200 aa13.19□□□□□ -0.3
PTPRC-206ENST00000413409 TRBV7-1A0A0A6YYK4 115 aa13.18□□□□□ -0.3
PTPRC-206ENST00000413409 TRAV41A0A0B4J266 112 aa13.18□□□□□ -0.3
PTPRC-206ENST00000413409 ZNF320A2RRD8 509 aa13.18□□□□□ -0.3
PTPRC-206ENST00000413409 FAM223BA6NKX1 122 aa13.18□□□□□ -0.3
PTPRC-206ENST00000413409 H3BUA1 57 aa13.18□□□□□ -0.3
PTPRC-206ENST00000413409 BMPR1BO00238 502 aa13.18□□□□□ -0.3
PTPRC-206ENST00000413409 IGF1P05019 195 aa13.18□□□□□ -0.3
PTPRC-206ENST00000413409 MGST1P10620 155 aaKnown RBP13.18□□□□□ -0.3
PTPRC-206ENST00000413409 RPL15P61313 204 aaKnown RBP13.18□□□□□ -0.3
PTPRC-206ENST00000413409 RPL19P84098 196 aaKnown RBP13.18□□□□□ -0.3
PTPRC-206ENST00000413409 IBA57Q5T440 356 aaKnown RBP13.18□□□□□ -0.3
PTPRC-206ENST00000413409 FAM223AQ8IWN6 122 aa13.18□□□□□ -0.3
PTPRC-206ENST00000413409 CHRDL1Q9BU40 450 aa13.18□□□□□ -0.3
PTPRC-206ENST00000413409 RABAC1Q9UI14 185 aa13.18□□□□□ -0.3
PTPRC-206ENST00000413409 G3V318 75 aa13.17□□□□□ -0.3
PTPRC-206ENST00000413409 H3BUX3 64 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms