RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 OR10X1Q8NGY0 326 aa4.14□□□□□ -1.75
LINC00342-201ENST00000412393 CMTM2Q8TAZ6 248 aa4.14□□□□□ -1.75
LINC00342-201ENST00000412393 UBALD1Q8TB05 177 aa4.14□□□□□ -1.75
LINC00342-201ENST00000412393 RNASE8Q8TDE3 154 aaKnown RBP4.14□□□□□ -1.75
LINC00342-201ENST00000412393 SFRP2Q96HF1 295 aa4.14□□□□□ -1.75
LINC00342-201ENST00000412393 OR4F4Q96R69 305 aa4.14□□□□□ -1.75
LINC00342-201ENST00000412393 TXN2Q99757 166 aa4.14□□□□□ -1.75
LINC00342-201ENST00000412393 RSG1Q9BU20 258 aa4.14□□□□□ -1.75
LINC00342-201ENST00000412393 VAMP8Q9BV40 100 aa4.14□□□□□ -1.75
LINC00342-201ENST00000412393 RAB9BQ9NP90 201 aa4.14□□□□□ -1.75
LINC00342-201ENST00000412393 CCL28Q9NRJ3 127 aa4.14□□□□□ -1.75
LINC00342-201ENST00000412393 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.14□□□□□ -1.75
LINC00342-201ENST00000412393 LIN7CQ9NUP9 197 aaKnown RBP4.14□□□□□ -1.75
LINC00342-201ENST00000412393 LAMTOR2Q9Y2Q5 125 aa4.14□□□□□ -1.75
LINC00342-201ENST00000412393 TRAV30A0A087WSZ9 112 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 IGHV3-43A0A0B4J1X8 118 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 A0A1B0GV50 99 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 A0A1W2PPI3 338 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 TCRBV4S1A1TA0A5B7 111 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 C17orf112F2Z3M2 114 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 H0Y8G0 127 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 C15orf65H3BRN8 121 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 CCL25O15444 150 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 CRXO43186 299 aaPredicted RBP4.13□□□□□ -1.75
LINC00342-201ENST00000412393 ZNF253O75346 499 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 NDUFB8O95169 186 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 AMY1AP04745 511 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 SCTP09683 121 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 OR5G3P0C626 314 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 NBEAP1P0C6P0 100 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 FAM106CPP0CH98 169 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 STAG3L3P0CL85 134 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 IGHV3-43DP0DP04 118 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 OPRK1P41145 380 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 ATP5IP56385 69 aaPredicted RBP4.13□□□□□ -1.75
LINC00342-201ENST00000412393 GNB1P62873 340 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 CX3CL1P78423 397 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 SLC38A11Q08AI6 406 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 ZNF816Q0VGE8 651 aaPredicted RBP4.13□□□□□ -1.75
LINC00342-201ENST00000412393 DIAPH2-AS1Q14236 149 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 HES1Q14469 280 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 ACSM6Q6P461 480 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 ZNF497Q6ZNH5 498 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 MOB3BQ86TA1 216 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 LINC00311Q8N616 119 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 DRAM1Q8N682 238 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 ZNF738Q8NE65 137 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 OR4C5Q8NGB2 326 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 OR10V1Q8NGI7 309 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 OR52E5Q8NH55 327 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 RPUSD4Q96CM3 377 aaKnown RBP4.13□□□□□ -1.75
LINC00342-201ENST00000412393 ELOVL1Q9BW60 279 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 QTRT1Q9BXR0 403 aaKnown RBP4.13□□□□□ -1.75
LINC00342-201ENST00000412393 OSTCQ9NRP0 149 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 TRAPPC2LQ9UL33 140 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 WDR83OSQ9Y284 106 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 MOB4Q9Y3A3 225 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 MEGF8Q7Z7M0 2845 aa4.13□□□□□ -1.75
LINC00342-201ENST00000412393 IGHV3-72A0A0B4J1Y9 119 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 IGHV1-3A0A0C4DH29 117 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 PSMB11A5LHX3 300 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 ZNF705FA8MVS1 300 aaPredicted RBP4.12□□□□□ -1.75
LINC00342-201ENST00000412393 C12orf77C9JDV5 145 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 C11orf94C9JXX5 98 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 RAB29O14966 203 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 SPINT2O43291 252 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 PAGE4O60829 102 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 RAMP3O60896 148 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 HYPMO75409 117 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 ZNF705DP0CH99 300 aaPredicted RBP4.12□□□□□ -1.75
LINC00342-201ENST00000412393 ZNF705BP0CI00 300 aaPredicted RBP4.12□□□□□ -1.75
LINC00342-201ENST00000412393 STAG3L2P0CL84 134 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 LOXL3P58215 753 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 TMEM30BQ3MIR4 351 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 TDRG1Q3Y452 100 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 TCTEX1D4Q5JR98 221 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 KHDC1LQ5JSQ8 128 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 FAM162BQ5T6X4 162 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 FAM53AQ6NSI3 398 aaPredicted RBP4.12□□□□□ -1.75
LINC00342-201ENST00000412393 TRAT1Q6PIZ9 186 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 C10orf99Q6UWK7 81 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 MTURNQ8N3F0 131 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 STPG4Q8N801 248 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 C5orf56Q8N8D9 126 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 ZNF709Q8N972 641 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 C8orf31Q8N9H6 132 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 OR10P1Q8NGE3 313 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 OR4X2Q8NGF9 303 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 HSPB9Q9BQS6 159 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 NPCDR1Q9BY65 106 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 SLC35D1Q9NTN3 355 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 ZNF586Q9NXT0 402 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 BET1LQ9NYM9 111 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 GNG12Q9UBI6 72 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 CACNG5Q9UF02 275 aa4.12□□□□□ -1.75
LINC00342-201ENST00000412393 RBM7Q9Y580 266 aaKnown RBP4.12□□□□□ -1.75
LINC00342-201ENST00000412393 TSSC4Q9Y5U2 329 aaPredicted RBP4.12□□□□□ -1.75
LINC00342-201ENST00000412393 PRKDCP78527 4128 aaKnown RBP4.11□□□□□ -1.75
LINC00342-201ENST00000412393 TRBV20OR9-2A0A075B6H5 130 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 NCBP2LA6PVI3 153 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms