RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 RIF1Q5UIP0 2472 aaKnown RBP9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 TRBV25-1A0A075B6N4 114 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 GAGE12BA1L429 117 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 GAGE12JA6NER3 117 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 GAGE7O76087 117 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 GAGE12FP0CL80 117 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 GAGE12GP0CL81 117 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 GAGE12IP0CL82 117 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 GAGE1Q13065 139 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 GAGE4Q13068 117 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 GAGE5Q13069 117 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 GAGE13Q4V321 117 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 TM2D1Q9BX74 207 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 ZNF138P52744 262 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 IGLV2-23P01705 113 aa9.21□□□□□ -0.93
PRPF40A-202ENST00000410080 CD59P13987 128 aa9.21□□□□□ -0.93
PRPF40A-202ENST00000410080 RASL11AQ6T310 242 aa9.21□□□□□ -0.93
PRPF40A-202ENST00000410080 KNCNA6PVL3 124 aa9.21□□□□□ -0.93
PRPF40A-202ENST00000410080 MSMBP08118 114 aa9.21□□□□□ -0.93
PRPF40A-202ENST00000410080 SELLP14151 372 aa9.21□□□□□ -0.93
PRPF40A-202ENST00000410080 KLK9Q9UKQ9 250 aa9.21□□□□□ -0.93
PRPF40A-202ENST00000410080 IGKV1OR2-108A0A075B7D4 117 aa9.21□□□□□ -0.94
PRPF40A-202ENST00000410080 ANGP03950 147 aaKnown RBP9.21□□□□□ -0.94
PRPF40A-202ENST00000410080 COL8A2P25067 703 aa9.21□□□□□ -0.94
PRPF40A-202ENST00000410080 IFITM3Q01628 133 aa9.21□□□□□ -0.94
PRPF40A-202ENST00000410080 GAGE6Q13070 117 aa9.21□□□□□ -0.94
PRPF40A-202ENST00000410080 C2orf82Q6UX34 121 aa9.21□□□□□ -0.94
PRPF40A-202ENST00000410080 LTBP1Q14766 1721 aa9.21□□□□□ -0.94
PRPF40A-202ENST00000410080 RAI1Q7Z5J4 1906 aaPredicted RBP9.21□□□□□ -0.94
PRPF40A-202ENST00000410080 PAX9P55771 341 aa9.21□□□□□ -0.94
PRPF40A-202ENST00000410080 EFNB3Q15768 340 aa9.21□□□□□ -0.94
PRPF40A-202ENST00000410080 MCRIP2Q9BUT9 160 aaKnown RBP9.21□□□□□ -0.94
PRPF40A-202ENST00000410080 ZNF319Q9P2F9 582 aa9.21□□□□□ -0.94
PRPF40A-202ENST00000410080 PMVKQ15126 192 aa9.2□□□□□ -0.94
PRPF40A-202ENST00000410080 TMEM14DPA8MWL7 114 aa9.2□□□□□ -0.94
PRPF40A-202ENST00000410080 TIMP3P35625 211 aa9.2□□□□□ -0.94
PRPF40A-202ENST00000410080 PRR30Q53SZ7 412 aaPredicted RBP9.2□□□□□ -0.94
PRPF40A-202ENST00000410080 SAMD5Q5TGI4 173 aa9.2□□□□□ -0.94
PRPF40A-202ENST00000410080 TIMM21Q9BVV7 248 aa9.2□□□□□ -0.94
PRPF40A-202ENST00000410080 VCYO14598 125 aa9.2□□□□□ -0.94
PRPF40A-202ENST00000410080 MMP23AO75900 390 aa9.2□□□□□ -0.94
PRPF40A-202ENST00000410080 DSCR8Q96T75 97 aa9.2□□□□□ -0.94
PRPF40A-202ENST00000410080 COL4A6Q14031 1691 aa9.2□□□□□ -0.94
PRPF40A-202ENST00000410080 C10orf55Q5SWW7 151 aa9.2□□□□□ -0.94
PRPF40A-202ENST00000410080 IFI27L1Q96BM0 104 aa9.2□□□□□ -0.94
PRPF40A-202ENST00000410080 C5orf30Q96GV9 206 aa9.2□□□□□ -0.94
PRPF40A-202ENST00000410080 TRAV12-1A0A0B4J245 112 aa9.2□□□□□ -0.94
PRPF40A-202ENST00000410080 SH2D1AO60880 128 aa9.2□□□□□ -0.94
PRPF40A-202ENST00000410080 M0R1W7 72 aa9.19□□□□□ -0.94
PRPF40A-202ENST00000410080 SERF1AO75920 110 aa9.19□□□□□ -0.94
PRPF40A-202ENST00000410080 C4orf48Q5BLP8 95 aa9.19□□□□□ -0.94
PRPF40A-202ENST00000410080 OVOL2Q9BRP0 275 aa9.19□□□□□ -0.94
PRPF40A-202ENST00000410080 RHPN1-AS1Q9BWJ2 59 aa9.19□□□□□ -0.94
PRPF40A-202ENST00000410080 SMKR1H3BMG3 65 aa9.19□□□□□ -0.94
PRPF40A-202ENST00000410080 Q5BKY6 102 aa9.19□□□□□ -0.94
PRPF40A-202ENST00000410080 WBP1Q96G27 269 aa9.19□□□□□ -0.94
PRPF40A-202ENST00000410080 RPL23P62829 140 aaKnown RBP9.19□□□□□ -0.94
PRPF40A-202ENST00000410080 KLF5Q13887 457 aaPredicted RBP9.19□□□□□ -0.94
PRPF40A-202ENST00000410080 C1QL4Q86Z23 238 aa9.19□□□□□ -0.94
PRPF40A-202ENST00000410080 NABP1Q96AH0 204 aa9.19□□□□□ -0.94
PRPF40A-202ENST00000410080 IGHG3P01860 377 aa9.19□□□□□ -0.94
PRPF40A-202ENST00000410080 MRPL14Q6P1L8 145 aaKnown RBP9.19□□□□□ -0.94
PRPF40A-202ENST00000410080 PPBPP02775 128 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 C1QTNF9P0C862 333 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 RTBDNQ9BSG5 229 aaPredicted RBP9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 TRAV12-2A0A075B6T6 113 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 IGHV3-38A0A0C4DH36 116 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 SUPT4H1P63272 117 aaKnown RBP9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 SLC25A48Q6ZT89 311 aaKnown RBP9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 LYZL4Q96KX0 146 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 DUTP33316 252 aaKnown RBP9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 MALRD1Q5VYJ5 2156 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 C5orf64Q2M2E5 130 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 PLEKHB2Q96CS7 222 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 DAZ1Q9NQZ3 744 aaKnown RBP9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 SEC11AP67812 179 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 ZFAND6Q6FIF0 208 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 LYPD2Q6UXB3 125 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 IGKV1D-13A0A0B4J2D9 117 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 IGKV1-13P0DP09 117 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 LINC00518Q8N0U6 118 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 LYZL1Q6UWQ5 148 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 FGFBP3Q8TAT2 258 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 TIMM17AQ99595 171 aa9.18□□□□□ -0.94
PRPF40A-202ENST00000410080 MYMXA0A1B0GTQ4 84 aa9.17□□□□□ -0.94
PRPF40A-202ENST00000410080 FAM90A2PQ658T7 463 aa9.17□□□□□ -0.94
PRPF40A-202ENST00000410080 A0A087WV48 116 aa9.17□□□□□ -0.94
PRPF40A-202ENST00000410080 A0A0J9YY99 117 aa9.17□□□□□ -0.94
PRPF40A-202ENST00000410080 A6NNC1 897 aa9.17□□□□□ -0.94
PRPF40A-202ENST00000410080 C18orf12Q96KH6 178 aa9.17□□□□□ -0.94
PRPF40A-202ENST00000410080 IGHV4-4A0A075B6R2 117 aa9.17□□□□□ -0.94
PRPF40A-202ENST00000410080 NXPH4O95158 308 aa9.17□□□□□ -0.94
PRPF40A-202ENST00000410080 IGKV1-5P01602 117 aa9.17□□□□□ -0.94
PRPF40A-202ENST00000410080 UBE2E1P51965 193 aa9.17□□□□□ -0.94
PRPF40A-202ENST00000410080 IGLV3-19P01714 112 aa9.17□□□□□ -0.94
PRPF40A-202ENST00000410080 CCL20P78556 96 aa9.17□□□□□ -0.94
PRPF40A-202ENST00000410080 SMIM2Q9BVW6 85 aa9.17□□□□□ -0.94
PRPF40A-202ENST00000410080 SCRT2Q9NQ03 307 aa9.17□□□□□ -0.94
PRPF40A-202ENST00000410080 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.16□□□□□ -0.94
PRPF40A-202ENST00000410080 OVOL3O00110 214 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms