RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 PSG9Q00887 426 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 C5orf64Q2M2E5 130 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 PRR30Q53SZ7 412 aaPredicted RBP13.11□□□□□ -0.31
LIMS2-208ENST00000410011 UNQ5815/PRO19632Q6UWF5 114 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 TTC9CQ8N5M4 171 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 FANCD2OSQ96PS1 177 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 ZNF747Q9BV97 191 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 CBY1Q9Y3M2 126 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 BSNQ9UPA5 3926 aa13.11□□□□□ -0.31
LIMS2-208ENST00000410011 PCNX1Q96RV3 2341 aa13.1□□□□□ -0.31
LIMS2-208ENST00000410011 ABCA1O95477 2261 aa13.1□□□□□ -0.31
LIMS2-208ENST00000410011 CCL25O15444 150 aa13.1□□□□□ -0.31
LIMS2-208ENST00000410011 GNG7O60262 68 aa13.1□□□□□ -0.31
LIMS2-208ENST00000410011 TOX4O94842 621 aa13.1□□□□□ -0.31
LIMS2-208ENST00000410011 PTTG1IPP53801 180 aa13.1□□□□□ -0.31
LIMS2-208ENST00000410011 hDV102S1A0JD36 115 aa13.1□□□□□ -0.31
LIMS2-208ENST00000410011 PRTN3P24158 256 aa13.1□□□□□ -0.31
LIMS2-208ENST00000410011 ZNF138P52744 262 aa13.1□□□□□ -0.31
LIMS2-208ENST00000410011 LINC01560Q8TB33 94 aa13.1□□□□□ -0.31
LIMS2-208ENST00000410011 SAPCD1Q5SSQ6 148 aa13.09□□□□□ -0.31
LIMS2-208ENST00000410011 C12orf54Q6X4T0 127 aa13.09□□□□□ -0.31
LIMS2-208ENST00000410011 OR10AG1Q8NH19 301 aa13.09□□□□□ -0.31
LIMS2-208ENST00000410011 DPF1Q92782 380 aa13.09□□□□□ -0.31
LIMS2-208ENST00000410011 F8W735 103 aaPredicted RBP13.08□□□□□ -0.31
LIMS2-208ENST00000410011 K7ENP7 123 aa13.08□□□□□ -0.31
LIMS2-208ENST00000410011 NBL1P41271 181 aa13.08□□□□□ -0.31
LIMS2-208ENST00000410011 C1orf122Q6ZSJ8 110 aa13.08□□□□□ -0.31
LIMS2-208ENST00000410011 OOSP1A8MZH6 123 aa13.08□□□□□ -0.32
LIMS2-208ENST00000410011 M0R3E3 92 aa13.08□□□□□ -0.32
LIMS2-208ENST00000410011 FA2HQ7L5A8 372 aa13.08□□□□□ -0.32
LIMS2-208ENST00000410011 TIMD4Q96H15 378 aa13.08□□□□□ -0.32
LIMS2-208ENST00000410011 PMCHL2Q9BQD1 86 aa13.08□□□□□ -0.32
LIMS2-208ENST00000410011 THYN1Q9P016 225 aa13.08□□□□□ -0.32
LIMS2-208ENST00000410011 MAP1BP46821 2468 aaKnown RBP13.07□□□□□ -0.32
LIMS2-208ENST00000410011 POLEQ07864 2286 aa13.07□□□□□ -0.32
LIMS2-208ENST00000410011 IGHV2-70DA0A0C4DH43 119 aa13.07□□□□□ -0.32
LIMS2-208ENST00000410011 RPL7P18124 248 aaKnown RBP13.07□□□□□ -0.32
LIMS2-208ENST00000410011 ARF6P62330 175 aa13.07□□□□□ -0.32
LIMS2-208ENST00000410011 MPV17L2Q567V2 206 aa13.07□□□□□ -0.32
LIMS2-208ENST00000410011 PRSS3P2Q8NHM4 247 aa13.07□□□□□ -0.32
LIMS2-208ENST00000410011 HILPDAQ9Y5L2 63 aa13.07□□□□□ -0.32
LIMS2-208ENST00000410011 ZNF292O60281 2723 aa13.07□□□□□ -0.32
LIMS2-208ENST00000410011 ACACAQ13085 2346 aa13.07□□□□□ -0.32
LIMS2-208ENST00000410011 EBI3Q14213 229 aa13.07□□□□□ -0.32
LIMS2-208ENST00000410011 BVES-AS1Q5T3Y7 98 aa13.07□□□□□ -0.32
LIMS2-208ENST00000410011 FAM104BQ5XKR9 115 aa13.07□□□□□ -0.32
LIMS2-208ENST00000410011 CCDC144NLQ6NUI1 221 aa13.07□□□□□ -0.32
LIMS2-208ENST00000410011 LAMA5O15230 3695 aa13.06□□□□□ -0.32
LIMS2-208ENST00000410011 TMEM189A5PLL7 270 aa13.06□□□□□ -0.32
LIMS2-208ENST00000410011 CSN3P07498 182 aa13.06□□□□□ -0.32
LIMS2-208ENST00000410011 SRSF2Q01130 221 aaKnown RBP13.06□□□□□ -0.32
LIMS2-208ENST00000410011 ARPC1AQ92747 370 aa13.06□□□□□ -0.32
LIMS2-208ENST00000410011 C8orf49Q96NF6 230 aa13.06□□□□□ -0.32
LIMS2-208ENST00000410011 C21orf62Q9NYP8 219 aa13.06□□□□□ -0.32
LIMS2-208ENST00000410011 K7EP13 123 aa13.06□□□□□ -0.32
LIMS2-208ENST00000410011 SCGB2A1O75556 95 aa13.06□□□□□ -0.32
LIMS2-208ENST00000410011 S100A7P31151 101 aa13.06□□□□□ -0.32
LIMS2-208ENST00000410011 RPS20P60866 119 aaKnown RBP13.06□□□□□ -0.32
LIMS2-208ENST00000410011 KLF17Q5JT82 389 aaPredicted RBP13.06□□□□□ -0.32
LIMS2-208ENST00000410011 DEFB125Q8N687 156 aa13.06□□□□□ -0.32
LIMS2-208ENST00000410011 Q8N6K4 173 aa13.06□□□□□ -0.32
LIMS2-208ENST00000410011 LOC105371242A0A075B767 164 aa13.05□□□□□ -0.32
LIMS2-208ENST00000410011 NUDT3O95989 172 aa13.05□□□□□ -0.32
LIMS2-208ENST00000410011 HIST1H1AQ02539 215 aaPredicted RBP13.05□□□□□ -0.32
LIMS2-208ENST00000410011 LYZL1Q6UWQ5 148 aa13.05□□□□□ -0.32
LIMS2-208ENST00000410011 NPFFR1Q9GZQ6 430 aa13.05□□□□□ -0.32
LIMS2-208ENST00000410011 COX8AP10176 69 aa13.05□□□□□ -0.32
LIMS2-208ENST00000410011 APC2O95996 2303 aa13.04□□□□□ -0.32
LIMS2-208ENST00000410011 SH2D1AO60880 128 aa13.04□□□□□ -0.32
LIMS2-208ENST00000410011 RHOGP84095 191 aa13.04□□□□□ -0.32
LIMS2-208ENST00000410011 FBLN7Q53RD9 439 aa13.04□□□□□ -0.32
LIMS2-208ENST00000410011 ORMDL3Q8N138 153 aa13.04□□□□□ -0.32
LIMS2-208ENST00000410011 BCL6BQ8N143 479 aaPredicted RBP13.04□□□□□ -0.32
LIMS2-208ENST00000410011 PRR25Q96S07 402 aa13.04□□□□□ -0.32
LIMS2-208ENST00000410011 ANKRD11Q6UB99 2663 aaPredicted RBP13.04□□□□□ -0.32
LIMS2-208ENST00000410011 BMI1P35226 326 aa13.04□□□□□ -0.32
LIMS2-208ENST00000410011 KLK9Q2XQG4 91 aa13.04□□□□□ -0.32
LIMS2-208ENST00000410011 MINOS1Q5TGZ0 78 aa13.04□□□□□ -0.32
LIMS2-208ENST00000410011 KLK9Q9UKQ9 250 aa13.04□□□□□ -0.32
LIMS2-208ENST00000410011 MINOS1-NBL1R4GNA1 71 aa13.04□□□□□ -0.32
LIMS2-208ENST00000410011 A0A096LNJ9 63 aa13.03□□□□□ -0.32
LIMS2-208ENST00000410011 TAX1BP3O14907 124 aa13.03□□□□□ -0.32
LIMS2-208ENST00000410011 IFI27P40305 119 aaPredicted RBP13.03□□□□□ -0.32
LIMS2-208ENST00000410011 Q6ZVH6 145 aa13.03□□□□□ -0.32
LIMS2-208ENST00000410011 SIGLEC8Q9NYZ4 499 aa13.03□□□□□ -0.32
LIMS2-208ENST00000410011 ADGRG4Q8IZF6 3080 aa13.02□□□□□ -0.32
LIMS2-208ENST00000410011 D6R8Y8 96 aa13.02□□□□□ -0.32
LIMS2-208ENST00000410011 HES1Q14469 280 aa13.02□□□□□ -0.32
LIMS2-208ENST00000410011 LGALS9BQ3B8N2 356 aa13.02□□□□□ -0.32
LIMS2-208ENST00000410011 LGALS9CQ6DKI2 356 aa13.02□□□□□ -0.32
LIMS2-208ENST00000410011 PRELID3AQ96N28 172 aa13.02□□□□□ -0.32
LIMS2-208ENST00000410011 AKAP13Q12802 2813 aa13.02□□□□□ -0.32
LIMS2-208ENST00000410011 CD5LO43866 347 aa13.02□□□□□ -0.33
LIMS2-208ENST00000410011 CTSGP08311 255 aa13.02□□□□□ -0.33
LIMS2-208ENST00000410011 PAX8Q06710 450 aa13.02□□□□□ -0.33
LIMS2-208ENST00000410011 OR1N2Q8NGR9 330 aa13.02□□□□□ -0.33
LIMS2-208ENST00000410011 ASCL2Q99929 193 aa13.02□□□□□ -0.33
LIMS2-208ENST00000410011 NDPQ00604 133 aa13.01□□□□□ -0.33
LIMS2-208ENST00000410011 C11orf71Q6IPW1 123 aa13.01□□□□□ -0.33
LIMS2-208ENST00000410011 TPPP3Q9BW30 176 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms