RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 HMGB3O15347 200 aaKnown RBP15.39■□□□□ 0.05
C4orf48-202ENST00000409860 SNRPCP09234 159 aaKnown RBP15.39■□□□□ 0.05
C4orf48-202ENST00000409860 ZNF688P0C7X2 276 aa15.39■□□□□ 0.05
C4orf48-202ENST00000409860 STAG3L2P0CL84 134 aa15.39■□□□□ 0.05
C4orf48-202ENST00000409860 STAG3L3P0CL85 134 aa15.39■□□□□ 0.05
C4orf48-202ENST00000409860 RAB5CP51148 216 aa15.39■□□□□ 0.05
C4orf48-202ENST00000409860 FAM24BQ8N5W8 94 aa15.39■□□□□ 0.05
C4orf48-202ENST00000409860 FAM213BQ8TBF2 198 aa15.39■□□□□ 0.05
C4orf48-202ENST00000409860 RNF141Q8WVD5 230 aa15.39■□□□□ 0.05
C4orf48-202ENST00000409860 FAM110AQ9BQ89 295 aa15.39■□□□□ 0.05
C4orf48-202ENST00000409860 SLC50A1Q9BRV3 221 aa15.39■□□□□ 0.05
C4orf48-202ENST00000409860 PLA2G2EQ9NZK7 142 aa15.39■□□□□ 0.05
C4orf48-202ENST00000409860 UBQLN2Q9UHD9 624 aa15.39■□□□□ 0.05
C4orf48-202ENST00000409860 H3BTX0 84 aa15.38■□□□□ 0.05
C4orf48-202ENST00000409860 PRB2P02812 416 aaPredicted RBP15.38■□□□□ 0.05
C4orf48-202ENST00000409860 OR10J4P0C629 311 aa15.38■□□□□ 0.05
C4orf48-202ENST00000409860 ODF3L2Q3SX64 289 aa15.38■□□□□ 0.05
C4orf48-202ENST00000409860 FXYD5Q96DB9 178 aa15.38■□□□□ 0.05
C4orf48-202ENST00000409860 ZNF503Q96F45 646 aa15.38■□□□□ 0.05
C4orf48-202ENST00000409860 MAP6D1Q9H9H5 199 aa15.38■□□□□ 0.05
C4orf48-202ENST00000409860 ZNF586Q9NXT0 402 aa15.38■□□□□ 0.05
C4orf48-202ENST00000409860 TRBV19A0A075B6N1 114 aa15.37■□□□□ 0.05
C4orf48-202ENST00000409860 ZNF253O75346 499 aa15.37■□□□□ 0.05
C4orf48-202ENST00000409860 CXorf1O96002 111 aa15.37■□□□□ 0.05
C4orf48-202ENST00000409860 ARL14EPLP0DKL9 152 aa15.37■□□□□ 0.05
C4orf48-202ENST00000409860 DEFB131AP59861 70 aa15.37■□□□□ 0.05
C4orf48-202ENST00000409860 PDE6HQ13956 83 aa15.37■□□□□ 0.05
C4orf48-202ENST00000409860 ZNF726P1Q15940 193 aa15.37■□□□□ 0.05
C4orf48-202ENST00000409860 PSMG4Q5JS54 123 aa15.37■□□□□ 0.05
C4orf48-202ENST00000409860 SSX7Q7RTT5 188 aa15.37■□□□□ 0.05
C4orf48-202ENST00000409860 BLNKQ8WV28 456 aa15.37■□□□□ 0.05
C4orf48-202ENST00000409860 MAP1LC3B2A6NCE7 125 aa15.36■□□□□ 0.05
C4orf48-202ENST00000409860 NBEAP1P0C6P0 100 aa15.36■□□□□ 0.05
C4orf48-202ENST00000409860 FHITP49789 147 aa15.36■□□□□ 0.05
C4orf48-202ENST00000409860 SULT1A2P50226 295 aa15.36■□□□□ 0.05
C4orf48-202ENST00000409860 Q8N1Y9 231 aa15.36■□□□□ 0.05
C4orf48-202ENST00000409860 LINC00052Q96N35 136 aa15.36■□□□□ 0.05
C4orf48-202ENST00000409860 MAP1LC3BQ9GZQ8 125 aa15.36■□□□□ 0.05
C4orf48-202ENST00000409860 C19orf73Q9NVV2 129 aa15.36■□□□□ 0.05
C4orf48-202ENST00000409860 NBEAL1Q6ZS30 2694 aa15.36■□□□□ 0.05
C4orf48-202ENST00000409860 SLC17A3O00476 420 aa15.35■□□□□ 0.05
C4orf48-202ENST00000409860 PSG9Q00887 426 aa15.35■□□□□ 0.05
C4orf48-202ENST00000409860 ALKAL2Q6UX46 152 aa15.35■□□□□ 0.05
C4orf48-202ENST00000409860 IQCF2Q8IXL9 164 aa15.35■□□□□ 0.05
C4orf48-202ENST00000409860 SAT2Q96F10 170 aaPredicted RBP15.35■□□□□ 0.05
C4orf48-202ENST00000409860 ZNF331Q9NQX6 463 aaPredicted RBP15.35■□□□□ 0.05
C4orf48-202ENST00000409860 CLEC5AQ9NY25 188 aa15.35■□□□□ 0.05
C4orf48-202ENST00000409860 TRAV8-2A0A0B4J237 113 aa15.34■□□□□ 0.05
C4orf48-202ENST00000409860 GCHFRP30047 84 aa15.34■□□□□ 0.05
C4orf48-202ENST00000409860 DEFB125Q8N687 156 aa15.34■□□□□ 0.05
C4orf48-202ENST00000409860 WFDC10AQ9H1F0 79 aa15.34■□□□□ 0.05
C4orf48-202ENST00000409860 TMEM167BQ9NRX6 74 aa15.34■□□□□ 0.05
C4orf48-202ENST00000409860 K7EIL1 84 aa15.33■□□□□ 0.04
C4orf48-202ENST00000409860 FAM74A1Q5RGS3 127 aa15.33■□□□□ 0.04
C4orf48-202ENST00000409860 IGFL4Q6B9Z1 124 aa15.33■□□□□ 0.04
C4orf48-202ENST00000409860 APRG1Q8IVJ8 170 aa15.33■□□□□ 0.04
C4orf48-202ENST00000409860 NDUFB4O95168 129 aa15.32■□□□□ 0.04
C4orf48-202ENST00000409860 H2AFB1P0C5Y9 115 aa15.32■□□□□ 0.04
C4orf48-202ENST00000409860 FGF8P55075 233 aaPredicted RBP15.32■□□□□ 0.04
C4orf48-202ENST00000409860 DEFA6Q01524 100 aa15.32■□□□□ 0.04
C4orf48-202ENST00000409860 RNF182Q8N6D2 247 aa15.32■□□□□ 0.04
C4orf48-202ENST00000409860 SFT2D1Q8WV19 159 aa15.32■□□□□ 0.04
C4orf48-202ENST00000409860 MBD3L1Q8WWY6 194 aa15.32■□□□□ 0.04
C4orf48-202ENST00000409860 C20orf173Q96LM9 149 aa15.32■□□□□ 0.04
C4orf48-202ENST00000409860 AAMDCQ9H7C9 122 aa15.32■□□□□ 0.04
C4orf48-202ENST00000409860 TUBA4BQ9H853 241 aa15.32■□□□□ 0.04
C4orf48-202ENST00000409860 SRD5A3Q9H8P0 318 aa15.32■□□□□ 0.04
C4orf48-202ENST00000409860 DNAH3Q8TD57 4116 aa15.32■□□□□ 0.04
C4orf48-202ENST00000409860 PSG3Q16557 428 aa15.31■□□□□ 0.04
C4orf48-202ENST00000409860 ZNF738Q8NE65 137 aa15.31■□□□□ 0.04
C4orf48-202ENST00000409860 ZNF705EA8MWA4 302 aaPredicted RBP15.3■□□□□ 0.04
C4orf48-202ENST00000409860 IGHV4-30-4P0DP06 118 aa15.3■□□□□ 0.04
C4orf48-202ENST00000409860 HLA-DMBP28068 263 aa15.3■□□□□ 0.04
C4orf48-202ENST00000409860 LYPD1Q8N2G4 141 aa15.3■□□□□ 0.04
C4orf48-202ENST00000409860 PRELID1Q9Y255 219 aa15.3■□□□□ 0.04
C4orf48-202ENST00000409860 TEX46H3BTG2 121 aa15.29■□□□□ 0.04
C4orf48-202ENST00000409860 RANP62826 216 aaKnown RBP15.29■□□□□ 0.04
C4orf48-202ENST00000409860 ZNF124Q15973 351 aa15.29■□□□□ 0.04
C4orf48-202ENST00000409860 FOXI2Q6ZQN5 318 aa15.29■□□□□ 0.04
C4orf48-202ENST00000409860 SUN5Q8TC36 379 aa15.29■□□□□ 0.04
C4orf48-202ENST00000409860 MRAPQ8TCY5 172 aa15.29■□□□□ 0.04
C4orf48-202ENST00000409860 MRPL53Q96EL3 112 aaKnown RBP15.29■□□□□ 0.04
C4orf48-202ENST00000409860 Q9H3A6 140 aa15.29■□□□□ 0.04
C4orf48-202ENST00000409860 KNCNA6PVL3 124 aa15.28■□□□□ 0.04
C4orf48-202ENST00000409860 A8MZ25 164 aa15.28■□□□□ 0.04
C4orf48-202ENST00000409860 HBE1P02100 147 aa15.28■□□□□ 0.04
C4orf48-202ENST00000409860 ICAM4Q14773 271 aa15.28■□□□□ 0.04
C4orf48-202ENST00000409860 DEFB121Q5J5C9 76 aa15.28■□□□□ 0.04
C4orf48-202ENST00000409860 ACTL10Q5JWF8 245 aa15.28■□□□□ 0.04
C4orf48-202ENST00000409860 EBLN2Q6P2I7 272 aa15.28■□□□□ 0.04
C4orf48-202ENST00000409860 EXOC3-AS1Q8N2X6 119 aa15.28■□□□□ 0.04
C4orf48-202ENST00000409860 RPUSD4Q96CM3 377 aaKnown RBP15.28■□□□□ 0.04
C4orf48-202ENST00000409860 CITED4Q96RK1 184 aa15.28■□□□□ 0.04
C4orf48-202ENST00000409860 TMPRSS5Q9H3S3 457 aa15.28■□□□□ 0.04
C4orf48-202ENST00000409860 OTORQ9NRC9 128 aa15.28■□□□□ 0.04
C4orf48-202ENST00000409860 A0A1B0GV50 99 aa15.27■□□□□ 0.04
C4orf48-202ENST00000409860 TEX261Q6UWH6 196 aa15.27■□□□□ 0.04
C4orf48-202ENST00000409860 STHQ8IWL8 128 aa15.27■□□□□ 0.04
C4orf48-202ENST00000409860 SAV1Q9H4B6 383 aaPredicted RBP15.27■□□□□ 0.04
C4orf48-202ENST00000409860 TRAV1-1A0A0B4J248 108 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms