RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 PMCHL1Q16048 86 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 ZCCHC23Q6ZST2 131 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 SDF2Q99470 211 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 SLC25A21Q9BQT8 299 aaPredicted RBP4.97□□□□□ -1.61
SMCO1-201ENST00000397537 ST20Q9HBF5 79 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 KCNIP2Q9NS61 270 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 RPUSD1Q9UJJ7 312 aaKnown RBP4.97□□□□□ -1.61
SMCO1-201ENST00000397537 MED31Q9Y3C7 131 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 CACNA1DQ01668 2161 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 NUP205Q92621 2012 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 PDCD11Q14690 1871 aaKnown RBP4.97□□□□□ -1.61
SMCO1-201ENST00000397537 CCDC179H3BU77 68 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 NPFFO15130 113 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 FSTL3O95633 263 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 CXorf1O96002 111 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 CDKN2AP42771 156 aaKnown RBP4.97□□□□□ -1.61
SMCO1-201ENST00000397537 CXCL6P80162 114 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 SLC38A11Q08AI6 406 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 CATR1Q13166 79 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 Q5XG85 94 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 C11orf87Q6NUJ2 197 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 SAXO1Q8IYX7 474 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 ZNF645Q8N7E2 425 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 TVP23CQ96ET8 276 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 SPIN2AQ99865 258 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 SPIN2BQ9BPZ2 258 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 CHCHD5Q9BSY4 110 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 MRPL32Q9BYC8 188 aaKnown RBP4.97□□□□□ -1.61
SMCO1-201ENST00000397537 PROCRQ9UNN8 238 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 FIS1Q9Y3D6 152 aa4.97□□□□□ -1.61
SMCO1-201ENST00000397537 MUC22E2RYF6 1773 aaPredicted RBP4.96□□□□□ -1.61
SMCO1-201ENST00000397537 TLCD2A6NGC4 264 aa4.96□□□□□ -1.62
SMCO1-201ENST00000397537 ZNF860A6NHJ4 632 aa4.96□□□□□ -1.62
SMCO1-201ENST00000397537 F8W1H4 67 aa4.96□□□□□ -1.62
SMCO1-201ENST00000397537 GABARAPH6UMI1 98 aa4.96□□□□□ -1.62
SMCO1-201ENST00000397537 HRASP01112 189 aa4.96□□□□□ -1.62
SMCO1-201ENST00000397537 KRASP01116 189 aa4.96□□□□□ -1.62
SMCO1-201ENST00000397537 GPX1P07203 203 aa4.96□□□□□ -1.62
SMCO1-201ENST00000397537 CRYBB3P26998 211 aa4.96□□□□□ -1.62
SMCO1-201ENST00000397537 POLR2JP52435 117 aaKnown RBP4.96□□□□□ -1.62
SMCO1-201ENST00000397537 LOXL1Q08397 574 aaPredicted RBP4.96□□□□□ -1.62
SMCO1-201ENST00000397537 LINC00303Q3SY05 128 aa4.96□□□□□ -1.62
SMCO1-201ENST00000397537 MEIG1Q5JSS6 88 aa4.96□□□□□ -1.62
SMCO1-201ENST00000397537 CASC10Q5T4H9 136 aa4.96□□□□□ -1.62
SMCO1-201ENST00000397537 PRIMA1Q86XR5 153 aa4.96□□□□□ -1.62
SMCO1-201ENST00000397537 FAM104AQ969W3 186 aa4.96□□□□□ -1.62
SMCO1-201ENST00000397537 NMNAT3Q96T66 252 aa4.96□□□□□ -1.62
SMCO1-201ENST00000397537 DOCK6Q96HP0 2047 aa4.96□□□□□ -1.62
SMCO1-201ENST00000397537 EML5Q05BV3 1969 aa4.96□□□□□ -1.62
SMCO1-201ENST00000397537 IGKV6D-41A0A0C4DH26 115 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 APOMO95445 188 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 PATE4P0C8F1 98 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 FAUP35544 74 aaKnown RBP4.95□□□□□ -1.62
SMCO1-201ENST00000397537 YPEL3P61236 119 aaPredicted RBP4.95□□□□□ -1.62
SMCO1-201ENST00000397537 HERVK_113P61574 105 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 PPP1CAP62136 330 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 CST6Q15828 149 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 RSPO1Q2MKA7 263 aaPredicted RBP4.95□□□□□ -1.62
SMCO1-201ENST00000397537 ORMDL2Q53FV1 153 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 CEMP1Q6PRD7 247 aaPredicted RBP4.95□□□□□ -1.62
SMCO1-201ENST00000397537 ZNF695Q8IW36 515 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 LINC00471Q8N535 108 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 Q8NBF4 154 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 LMX1AQ8TE12 382 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 TSSK6Q9BXA6 273 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 OTOGQ6ZRI0 2925 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 SPTBN1Q01082 2364 aaKnown RBP4.95□□□□□ -1.62
SMCO1-201ENST00000397537 TRGV10A0A0A0MS01 117 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 H3BRM9 83 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 IGLC6P0CF74 106 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 SCGB1C2P0DMR2 95 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 IFITM1P13164 125 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 KLF9Q13886 244 aaPredicted RBP4.95□□□□□ -1.62
SMCO1-201ENST00000397537 EBLN2Q6P2I7 272 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 Q6ZUT4 128 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 MDP1Q86V88 176 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 MKXQ8IYA7 352 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 OR4A5Q8NH83 315 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 ATP6V0E2Q8NHE4 81 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 CMTM2Q8TAZ6 248 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 SCGB1C1Q8TD33 95 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 VSIG2Q96IQ7 327 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 TIMM17AQ99595 171 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 PYGO2Q9BRQ0 406 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 PLEKHF2Q9H8W4 249 aa4.95□□□□□ -1.62
SMCO1-201ENST00000397537 AMMECR1Q9Y4X0 333 aaPredicted RBP4.95□□□□□ -1.62
SMCO1-201ENST00000397537 TLN1Q9Y490 2541 aaKnown RBP4.95□□□□□ -1.62
SMCO1-201ENST00000397537 KIF26AQ9ULI4 1882 aaPredicted RBP4.95□□□□□ -1.62
SMCO1-201ENST00000397537 MYO18AQ92614 2054 aaKnown RBP4.95□□□□□ -1.62
SMCO1-201ENST00000397537 GOLGA4Q13439 2230 aaKnown RBP4.94□□□□□ -1.62
SMCO1-201ENST00000397537 F8P00451 2351 aa4.94□□□□□ -1.62
SMCO1-201ENST00000397537 ABCA2Q9BZC7 2435 aa4.94□□□□□ -1.62
SMCO1-201ENST00000397537 IGLV8-61A0A075B6I0 122 aa4.94□□□□□ -1.62
SMCO1-201ENST00000397537 TRAV14DV4A0A0A6YYC5 116 aa4.94□□□□□ -1.62
SMCO1-201ENST00000397537 TRAV5A0A0B4J249 113 aa4.94□□□□□ -1.62
SMCO1-201ENST00000397537 IGKV6-21A0A0C4DH24 114 aa4.94□□□□□ -1.62
SMCO1-201ENST00000397537 PMS2P5A8MQ11 134 aa4.94□□□□□ -1.62
SMCO1-201ENST00000397537 TMEM262E9PQX1 116 aa4.94□□□□□ -1.62
SMCO1-201ENST00000397537 PROSCO94903 275 aa4.94□□□□□ -1.62
SMCO1-201ENST00000397537 TNFP01375 233 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms