RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 MLANAQ16655 118 aa4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 RNASE13Q5GAN3 156 aaKnown RBP4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 Q71RC1 249 aaPredicted RBP4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 LINC01356Q8N9X3 169 aa4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 SMIM2Q9BVW6 85 aa4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 GBF1Q92538 1859 aa4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 TRAV12-2A0A075B6T6 113 aa4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 MBD3L4A6NDZ8 208 aaPredicted RBP4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 MBD3L3A6NE82 208 aaPredicted RBP4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 PRSS29PA6NIE9 313 aa4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 MBD3L5A6NJ08 208 aaPredicted RBP4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 E9PLN8 166 aa4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 FGF16O43320 207 aa4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 FGF6P10767 208 aa4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 NBL1P41271 181 aa4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 RBM3P98179 157 aaKnown RBP4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 LYPD2Q6UXB3 125 aa4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 MBD3L2Q8NHZ7 208 aaPredicted RBP4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 GAFA1Q96PS6 74 aa4.62□□□□□ -1.67
GAPVD1-206ENST00000394104 MPZP25189 248 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 C5orf64Q2M2E5 130 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 NEGR1Q7Z3B1 354 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 LINC00479Q96M42 142 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 LY6HO94772 140 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 COL8A2P25067 703 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 GFI1Q99684 422 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 RNF114Q9Y508 228 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 SIPA1L3O60292 1781 aaPredicted RBP4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 MYO7AQ13402 2215 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 DOCK4Q8N1I0 1966 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 IGKV1-27A0A075B6S5 117 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 IGKV1-12A0A0C4DH73 117 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 A0A0G2JNJ9 132 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 B4DSR2 109 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 IGKV1D-12P01611 117 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 Q9UFV3 132 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 LINC01619G3V211 115 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 Q86TA4 180 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 TMEM105Q8N8V8 129 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 TMEM141Q96I45 108 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 OVOL3O00110 214 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 ZNRF2Q8NHG8 242 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 IGF2BP2-AS1Q96M15 143 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 SIGLEC9Q9Y336 463 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 TAF1LQ8IZX4 1826 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 WNK3Q9BYP7 1800 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 TRBV24-1A0A075B6N3 115 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 IGHV4-28A0A0C4DH34 117 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 UBE2BP63146 152 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 VWC2Q2TAL6 325 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 ZNF664Q8N3J9 261 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 TMEM243Q9BU79 118 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 CYTL1Q9NRR1 136 aa4.61□□□□□ -1.67
GAPVD1-206ENST00000394104 ARID1AO14497 2285 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 SHISA9B4DS77 424 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 RNF223E7ERA6 249 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 M0R1W7 72 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 C15orf53Q8NAA6 179 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 ZNRD1Q9P1U0 126 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 LINC00473A8K010 186 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 PSPNO60542 156 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 CRYGCP07315 174 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 EGR2P11161 476 aaPredicted RBP4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 RPL18AQ02543 176 aaKnown RBP4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 UTF1Q5T230 341 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 MRPL14Q6P1L8 145 aaKnown RBP4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 MRPL27Q9P0M9 148 aaKnown RBP4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 IGKV1-39P01597 117 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 IGKV1D-39P04432 117 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 RNASE2P10153 161 aaKnown RBP4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 HLA-DRB4P13762 266 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 SAA4P35542 130 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 CT83Q5H943 113 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 TMEM75Q8N9X5 138 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 HLA-DRB4X5D2U9 266 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 A0A1B0GUS0 222 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 K7ERJ3 54 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 ZNF883P0CG24 379 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 CARD19Q96LW7 228 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 SRSF8Q9BRL6 282 aaKnown RBP4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 DAZ1Q9NQZ3 744 aaKnown RBP4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 TRBV20-1A0A075B6N2 111 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 EFNA2O43921 213 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 TMEM258P61165 79 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 ASPHD1Q5U4P2 390 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 CEND1Q8N111 149 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 MESP1Q9BRJ9 268 aa4.6□□□□□ -1.67
GAPVD1-206ENST00000394104 IGKV1OR2-108A0A075B7D4 117 aa4.59□□□□□ -1.67
GAPVD1-206ENST00000394104 C9orf118A6NHY6 69 aa4.59□□□□□ -1.67
GAPVD1-206ENST00000394104 ANGP03950 147 aaKnown RBP4.59□□□□□ -1.67
GAPVD1-206ENST00000394104 Q0VFX4 171 aa4.59□□□□□ -1.67
GAPVD1-206ENST00000394104 HS3ST6Q96QI5 342 aa4.59□□□□□ -1.67
GAPVD1-206ENST00000394104 POLR3KQ9Y2Y1 108 aaPredicted RBP4.59□□□□□ -1.67
GAPVD1-206ENST00000394104 A0A1W2PPI3 338 aa4.59□□□□□ -1.67
GAPVD1-206ENST00000394104 IL18BPO95998 194 aa4.59□□□□□ -1.67
GAPVD1-206ENST00000394104 RPP25LQ8N5L8 163 aaKnown RBP4.59□□□□□ -1.67
GAPVD1-206ENST00000394104 WFDC9Q8NEX5 89 aa4.59□□□□□ -1.67
GAPVD1-206ENST00000394104 BPESC1Q9GZL8 116 aa4.59□□□□□ -1.67
GAPVD1-206ENST00000394104 DKK4Q9UBT3 224 aa4.59□□□□□ -1.67
GAPVD1-206ENST00000394104 A0A1B0GW64 132 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms