RNA–Protein interactions for RNA: ENST00000393203.2

PTGFRN-201, Transcript of prostaglandin F2 receptor inhibitor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTGFRN, Length 6,178 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRN-201ENST00000393203 Q0VG73 95 aa12.35□□□□□ -0.43
PTGFRN-201ENST00000393203 NSUN5P1Q3KNT7 163 aa12.35□□□□□ -0.43
PTGFRN-201ENST00000393203 PRSS22Q9GZN4 317 aa12.35□□□□□ -0.43
PTGFRN-201ENST00000393203 A0A1W2PPI3 338 aa12.35□□□□□ -0.43
PTGFRN-201ENST00000393203 C5orf64Q2M2E5 130 aa12.34□□□□□ -0.43
PTGFRN-201ENST00000393203 C9JAW5 83 aa12.34□□□□□ -0.43
PTGFRN-201ENST00000393203 PAX4O43316 350 aa12.34□□□□□ -0.43
PTGFRN-201ENST00000393203 DUX4L9Q6RFH8 374 aaPredicted RBP12.34□□□□□ -0.43
PTGFRN-201ENST00000393203 ASCL4Q6XD76 172 aa12.34□□□□□ -0.43
PTGFRN-201ENST00000393203 Q6ZS49 121 aa12.34□□□□□ -0.43
PTGFRN-201ENST00000393203 IGKV1-39P01597 117 aa12.34□□□□□ -0.43
PTGFRN-201ENST00000393203 IGKV1D-39P04432 117 aa12.34□□□□□ -0.43
PTGFRN-201ENST00000393203 COL8A2P25067 703 aa12.34□□□□□ -0.43
PTGFRN-201ENST00000393203 C1orf147Q96MC9 270 aaPredicted RBP12.34□□□□□ -0.43
PTGFRN-201ENST00000393203 YLPM1P49750 1951 aaKnown RBP12.34□□□□□ -0.43
PTGFRN-201ENST00000393203 TEX43Q6ZNM6 134 aa12.34□□□□□ -0.43
PTGFRN-201ENST00000393203 SIP14410 1827 aa12.33□□□□□ -0.44
PTGFRN-201ENST00000393203 IGHV2-5P01817 119 aa12.33□□□□□ -0.44
PTGFRN-201ENST00000393203 ZNF48Q96MX3 618 aaPredicted RBP12.33□□□□□ -0.44
PTGFRN-201ENST00000393203 S100A7L2Q5SY68 101 aa12.33□□□□□ -0.44
PTGFRN-201ENST00000393203 TRAV26-2A0A0B4J265 109 aa12.33□□□□□ -0.44
PTGFRN-201ENST00000393203 C20orf144Q9BQM9 153 aa12.33□□□□□ -0.44
PTGFRN-201ENST00000393203 TRPM7Q96QT4 1865 aa12.33□□□□□ -0.44
PTGFRN-201ENST00000393203 THADAQ6YHU6 1953 aa12.33□□□□□ -0.44
PTGFRN-201ENST00000393203 TRGV1A0A0A0MS02 117 aa12.33□□□□□ -0.44
PTGFRN-201ENST00000393203 A0A0G2JNJ9 132 aa12.33□□□□□ -0.44
PTGFRN-201ENST00000393203 Q9UFV3 132 aa12.33□□□□□ -0.44
PTGFRN-201ENST00000393203 SPTBN2O15020 2390 aa12.33□□□□□ -0.44
PTGFRN-201ENST00000393203 VWA8A3KMH1 1905 aa12.33□□□□□ -0.44
PTGFRN-201ENST00000393203 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.32□□□□□ -0.44
PTGFRN-201ENST00000393203 MORN3Q6PF18 240 aaPredicted RBP12.32□□□□□ -0.44
PTGFRN-201ENST00000393203 C1orf159Q96HA4 380 aa12.32□□□□□ -0.44
PTGFRN-201ENST00000393203 TRAV13-1A0A0B4J241 112 aa12.32□□□□□ -0.44
PTGFRN-201ENST00000393203 TCF20Q9UGU0 1960 aaKnown RBP12.32□□□□□ -0.44
PTGFRN-201ENST00000393203 EDA2RQ9HAV5 297 aa12.32□□□□□ -0.44
PTGFRN-201ENST00000393203 HEATR1Q9H583 2144 aaKnown RBP12.32□□□□□ -0.44
PTGFRN-201ENST00000393203 FOXL2NBQ6ZUU3 175 aa12.32□□□□□ -0.44
PTGFRN-201ENST00000393203 SSBP2P81877 361 aaPredicted RBP12.31□□□□□ -0.44
PTGFRN-201ENST00000393203 UBE2E2Q96LR5 201 aa12.31□□□□□ -0.44
PTGFRN-201ENST00000393203 LINC00477Q96M19 166 aa12.31□□□□□ -0.44
PTGFRN-201ENST00000393203 H3BUX3 64 aa12.31□□□□□ -0.44
PTGFRN-201ENST00000393203 VCYO14598 125 aa12.31□□□□□ -0.44
PTGFRN-201ENST00000393203 IGLC2P0DOY2 106 aa12.31□□□□□ -0.44
PTGFRN-201ENST00000393203 IGLC3P0DOY3 106 aa12.31□□□□□ -0.44
PTGFRN-201ENST00000393203 C10orf91Q5T1B1 145 aa12.31□□□□□ -0.44
PTGFRN-201ENST00000393203 Q6ZVH6 145 aa12.31□□□□□ -0.44
PTGFRN-201ENST00000393203 DOCK10Q96BY6 2186 aa12.31□□□□□ -0.44
PTGFRN-201ENST00000393203 ROS1P08922 2347 aa12.31□□□□□ -0.44
PTGFRN-201ENST00000393203 DIDO1Q9BTC0 2240 aaKnown RBP12.31□□□□□ -0.44
PTGFRN-201ENST00000393203 CRPP02741 224 aa12.31□□□□□ -0.44
PTGFRN-201ENST00000393203 IGLL1P15814 213 aa12.31□□□□□ -0.44
PTGFRN-201ENST00000393203 MDS2Q8NDY4 140 aa12.31□□□□□ -0.44
PTGFRN-201ENST00000393203 PLEKHB2Q96CS7 222 aa12.31□□□□□ -0.44
PTGFRN-201ENST00000393203 IGHV1-24A0A0C4DH33 117 aa12.3□□□□□ -0.44
PTGFRN-201ENST00000393203 HAPLN4Q86UW8 402 aa12.3□□□□□ -0.44
PTGFRN-201ENST00000393203 V9GYV3 84 aa12.3□□□□□ -0.44
PTGFRN-201ENST00000393203 SPTBN1Q01082 2364 aaKnown RBP12.3□□□□□ -0.44
PTGFRN-201ENST00000393203 LTBP1Q14766 1721 aa12.3□□□□□ -0.44
PTGFRN-201ENST00000393203 IL17RELQ6ZVW7 336 aa12.3□□□□□ -0.44
PTGFRN-201ENST00000393203 RPL35AP18077 110 aaKnown RBP12.3□□□□□ -0.44
PTGFRN-201ENST00000393203 SPACA3Q8IXA5 215 aa12.3□□□□□ -0.44
PTGFRN-201ENST00000393203 WIPF3A6NGB9 483 aa12.3□□□□□ -0.44
PTGFRN-201ENST00000393203 DKK1O94907 266 aa12.3□□□□□ -0.44
PTGFRN-201ENST00000393203 TMEM86BQ8N661 226 aa12.3□□□□□ -0.44
PTGFRN-201ENST00000393203 SHANK2-AS3Q9BTD1 123 aa12.3□□□□□ -0.44
PTGFRN-201ENST00000393203 INTS1Q8N201 2190 aaKnown RBP12.3□□□□□ -0.44
PTGFRN-201ENST00000393203 ZNF503-AS2A6NEH8 195 aa12.3□□□□□ -0.44
PTGFRN-201ENST00000393203 KNCNA6PVL3 124 aa12.3□□□□□ -0.44
PTGFRN-201ENST00000393203 E9PQ18 207 aa12.3□□□□□ -0.44
PTGFRN-201ENST00000393203 CFPP27918 469 aa12.29□□□□□ -0.44
PTGFRN-201ENST00000393203 MYO7BQ6PIF6 2116 aa12.29□□□□□ -0.44
PTGFRN-201ENST00000393203 GAGE2AQ6NT46 116 aa12.29□□□□□ -0.44
PTGFRN-201ENST00000393203 MRPL52Q86TS9 123 aaKnown RBP12.29□□□□□ -0.44
PTGFRN-201ENST00000393203 WDR86Q86TI4 376 aa12.29□□□□□ -0.44
PTGFRN-201ENST00000393203 VWC2Q2TAL6 325 aa12.28□□□□□ -0.44
PTGFRN-201ENST00000393203 C9orf139Q6ZV77 190 aa12.28□□□□□ -0.44
PTGFRN-201ENST00000393203 TIMM21Q9BVV7 248 aa12.28□□□□□ -0.44
PTGFRN-201ENST00000393203 NEGR1Q7Z3B1 354 aa12.28□□□□□ -0.44
PTGFRN-201ENST00000393203 TMEM14BQ9NUH8 114 aa12.28□□□□□ -0.44
PTGFRN-201ENST00000393203 ANAPC10Q9UM13 185 aa12.28□□□□□ -0.44
PTGFRN-201ENST00000393203 TSSC4Q9Y5U2 329 aaPredicted RBP12.28□□□□□ -0.44
PTGFRN-201ENST00000393203 GFRA4Q9GZZ7 299 aa12.28□□□□□ -0.44
PTGFRN-201ENST00000393203 JPT2Q9H910 190 aa12.28□□□□□ -0.44
PTGFRN-201ENST00000393203 LAMTOR3Q9UHA4 124 aa12.28□□□□□ -0.44
PTGFRN-201ENST00000393203 DOPEY2Q9Y3R5 2298 aa12.28□□□□□ -0.44
PTGFRN-201ENST00000393203 SAP30O75446 220 aa12.28□□□□□ -0.44
PTGFRN-201ENST00000393203 ZNF562Q6V9R5 426 aa12.28□□□□□ -0.44
PTGFRN-201ENST00000393203 K7ERJ3 54 aa12.28□□□□□ -0.44
PTGFRN-201ENST00000393203 LINC01559Q495D7 138 aa12.28□□□□□ -0.44
PTGFRN-201ENST00000393203 RHPN1-AS1Q9BWJ2 59 aa12.28□□□□□ -0.44
PTGFRN-201ENST00000393203 SLC25A16P16260 332 aa12.27□□□□□ -0.44
PTGFRN-201ENST00000393203 TP53TG1Q9Y2A0 90 aa12.27□□□□□ -0.44
PTGFRN-201ENST00000393203 WDR90Q96KV7 1748 aa12.27□□□□□ -0.44
PTGFRN-201ENST00000393203 TRBV7-1A0A0A6YYK4 115 aa12.27□□□□□ -0.45
PTGFRN-201ENST00000393203 TCF15Q12870 199 aa12.27□□□□□ -0.45
PTGFRN-201ENST00000393203 LYPD1Q8N2G4 141 aa12.27□□□□□ -0.45
PTGFRN-201ENST00000393203 TPSG1Q9NRR2 321 aa12.27□□□□□ -0.45
PTGFRN-201ENST00000393203 ITGB1BP1O14713 200 aa12.27□□□□□ -0.45
PTGFRN-201ENST00000393203 CADP27708 2225 aa12.27□□□□□ -0.45
PTGFRN-201ENST00000393203 OVOL3O00110 214 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms