RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 MAPKAPK5-AS1Q8N8E1 139 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 PKIBQ9C010 78 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 ALKBH6Q3KRA9 238 aa12.04□□□□□ -0.48
VLDLR-202ENST00000382099 TEN1Q86WV5 123 aa12.04□□□□□ -0.48
VLDLR-202ENST00000382099 SMG1Q96Q15 3661 aaKnown RBP12.04□□□□□ -0.48
VLDLR-202ENST00000382099 TMEM262E9PQX1 116 aa12.04□□□□□ -0.48
VLDLR-202ENST00000382099 RHODO00212 210 aa12.04□□□□□ -0.48
VLDLR-202ENST00000382099 CT83Q5H943 113 aa12.04□□□□□ -0.48
VLDLR-202ENST00000382099 GUSBP11Q6P575 273 aa12.04□□□□□ -0.48
VLDLR-202ENST00000382099 Q71RC1 249 aaPredicted RBP12.04□□□□□ -0.48
VLDLR-202ENST00000382099 C8orf46Q8TAG6 207 aa12.04□□□□□ -0.48
VLDLR-202ENST00000382099 OCIAD1Q9NX40 245 aa12.04□□□□□ -0.48
VLDLR-202ENST00000382099 DSCAML1Q8TD84 2053 aa12.04□□□□□ -0.48
VLDLR-202ENST00000382099 A8MWV9 139 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 PROP1O75360 226 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 SCGB1C2P0DMR2 95 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 CKS2P33552 79 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 ABHD17BQ5VST6 288 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 NPIPB3Q92617 1050 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 GFRA4Q9GZZ7 299 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 IGHV1OR21-1A0A087WYE8 117 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 TRAV40A0A0B4J280 105 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 TRGV8A0A0C4DH27 118 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 ARFGEF3Q5TH69 2177 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 PPP1R27Q86WC6 154 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 ORMDL3Q8N138 153 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 DMXL1Q9Y485 3027 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 A0A1W2PR77 199 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 TMEM213A2RRL7 107 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 C19orf71A6NCJ1 209 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 SLC25A48Q6ZT89 311 aaKnown RBP12.03□□□□□ -0.48
VLDLR-202ENST00000382099 FXYD5Q96DB9 178 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 UBTD1Q9HAC8 227 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 PRNDQ9UKY0 176 aa12.03□□□□□ -0.48
VLDLR-202ENST00000382099 CHCHD2Q9Y6H1 151 aaPredicted RBP12.03□□□□□ -0.48
VLDLR-202ENST00000382099 TMEM8BA6NDV4 472 aa12.02□□□□□ -0.48
VLDLR-202ENST00000382099 GOLT1AQ6ZVE7 132 aa12.02□□□□□ -0.48
VLDLR-202ENST00000382099 RPEQ96AT9 228 aa12.02□□□□□ -0.48
VLDLR-202ENST00000382099 PIEZO2Q9H5I5 2752 aa12.02□□□□□ -0.49
VLDLR-202ENST00000382099 CRLF1O75462 422 aa12.02□□□□□ -0.49
VLDLR-202ENST00000382099 Q8IYB0 196 aa12.02□□□□□ -0.49
VLDLR-202ENST00000382099 OR1L4Q8NGR5 311 aa12.02□□□□□ -0.49
VLDLR-202ENST00000382099 MLST8Q9BVC4 326 aa12.02□□□□□ -0.49
VLDLR-202ENST00000382099 FCN3O75636 299 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 CFIP05156 583 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 LEPP41159 167 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 MEOX1P50221 254 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 WDR86Q86TI4 376 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 SPRY4Q9C004 299 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 KLF12Q9Y4X4 402 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 ADAMTS20P59510 1910 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 ZNF503-AS2A6NEH8 195 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 PATE3B3GLJ2 98 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 VCX2Q9H322 139 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 MRPS17Q9Y2R5 130 aaKnown RBP12.01□□□□□ -0.49
VLDLR-202ENST00000382099 DPM2O94777 84 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 LIFP15018 202 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 MPV17P39210 176 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 MRPL23Q16540 153 aaKnown RBP12.01□□□□□ -0.49
VLDLR-202ENST00000382099 ANKRD29Q8N6D5 301 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 FMC1Q96HJ9 113 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 IFI27L2Q9H2X8 130 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 METRNQ9UJH8 293 aa12.01□□□□□ -0.49
VLDLR-202ENST00000382099 SRRM4A7MD48 611 aaKnown RBP12□□□□□ -0.49
VLDLR-202ENST00000382099 NDUFA3O95167 84 aa12□□□□□ -0.49
VLDLR-202ENST00000382099 TNFRSF1AP19438 455 aa12□□□□□ -0.49
VLDLR-202ENST00000382099 TBC1D28Q2M2D7 210 aa12□□□□□ -0.49
VLDLR-202ENST00000382099 Q6ZQT7 251 aa12□□□□□ -0.49
VLDLR-202ENST00000382099 ZNF492Q9P255 531 aa12□□□□□ -0.49
VLDLR-202ENST00000382099 RNF138Q8WVD3 245 aa12□□□□□ -0.49
VLDLR-202ENST00000382099 SPXQ9BT56 116 aa12□□□□□ -0.49
VLDLR-202ENST00000382099 OBP2BQ9NPH6 170 aa12□□□□□ -0.49
VLDLR-202ENST00000382099 HHLA3Q9XRX5 114 aa12□□□□□ -0.49
VLDLR-202ENST00000382099 DLL1O00548 723 aa11.99□□□□□ -0.49
VLDLR-202ENST00000382099 TCRAP04437 139 aa11.99□□□□□ -0.49
VLDLR-202ENST00000382099 WI2-2373I1.2A0A1W2PRP0 233 aa11.99□□□□□ -0.49
VLDLR-202ENST00000382099 NCBP2LA6PVI3 153 aaKnown RBP11.99□□□□□ -0.49
VLDLR-202ENST00000382099 LMO7DNF2Z398 122 aa11.99□□□□□ -0.49
VLDLR-202ENST00000382099 WISP2O76076 250 aa11.99□□□□□ -0.49
VLDLR-202ENST00000382099 NPYP01303 97 aa11.99□□□□□ -0.49
VLDLR-202ENST00000382099 SRSF9Q13242 221 aaKnown RBP eCLIP11.99□□□□□ -0.49
VLDLR-202ENST00000382099 TWIST1Q15672 202 aa11.99□□□□□ -0.49
VLDLR-202ENST00000382099 MORN3Q6PF18 240 aaPredicted RBP11.99□□□□□ -0.49
VLDLR-202ENST00000382099 PATE2Q6UY27 113 aa11.99□□□□□ -0.49
VLDLR-202ENST00000382099 OR1L8Q8NGR8 309 aa11.99□□□□□ -0.49
VLDLR-202ENST00000382099 Q9H3A6 140 aa11.99□□□□□ -0.49
VLDLR-202ENST00000382099 C3orf36Q3SXR2 165 aa11.99□□□□□ -0.49
VLDLR-202ENST00000382099 SCRG1O75711 98 aa11.98□□□□□ -0.49
VLDLR-202ENST00000382099 SRD5A1P18405 259 aa11.98□□□□□ -0.49
VLDLR-202ENST00000382099 GLRXP35754 106 aa11.98□□□□□ -0.49
VLDLR-202ENST00000382099 CD69Q07108 199 aa11.98□□□□□ -0.49
VLDLR-202ENST00000382099 C5orf47Q569G3 176 aa11.98□□□□□ -0.49
VLDLR-202ENST00000382099 RND1Q92730 232 aa11.98□□□□□ -0.49
VLDLR-202ENST00000382099 RASL11BQ9BPW5 248 aa11.98□□□□□ -0.49
VLDLR-202ENST00000382099 DUX1O43812 170 aa11.98□□□□□ -0.49
VLDLR-202ENST00000382099 CSDC2Q9Y534 153 aaKnown RBP11.98□□□□□ -0.49
VLDLR-202ENST00000382099 CENPVL3A0A0U1RRI6 287 aa11.97□□□□□ -0.49
VLDLR-202ENST00000382099 SCGB1D4Q6XE38 83 aa11.97□□□□□ -0.49
VLDLR-202ENST00000382099 SPENQ96T58 3664 aaKnown RBP11.97□□□□□ -0.49
VLDLR-202ENST00000382099 HLA-DRB4P13762 266 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms