RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 ZNF688P0C7X2 276 aa11.49□□□□□ -0.57
PDGFB-202ENST00000381551 ID1P41134 155 aa11.49□□□□□ -0.57
PDGFB-202ENST00000381551 CDC34P49427 236 aaPredicted RBP11.49□□□□□ -0.57
PDGFB-202ENST00000381551 PSMB3P49720 205 aa11.49□□□□□ -0.57
PDGFB-202ENST00000381551 TAS2R45P59539 299 aa11.49□□□□□ -0.57
PDGFB-202ENST00000381551 DEFB131AP59861 70 aa11.49□□□□□ -0.57
PDGFB-202ENST00000381551 GUK1Q16774 197 aa11.49□□□□□ -0.57
PDGFB-202ENST00000381551 RNF141Q8WVD5 230 aa11.49□□□□□ -0.57
PDGFB-202ENST00000381551 TMED6Q8WW62 240 aa11.49□□□□□ -0.57
PDGFB-202ENST00000381551 FXYD5Q96DB9 178 aa11.49□□□□□ -0.57
PDGFB-202ENST00000381551 SAT2Q96F10 170 aaPredicted RBP11.49□□□□□ -0.57
PDGFB-202ENST00000381551 C16orf92Q96LL3 132 aa11.49□□□□□ -0.57
PDGFB-202ENST00000381551 PAXXQ9BUH6 204 aa11.49□□□□□ -0.57
PDGFB-202ENST00000381551 WFDC10AQ9H1F0 79 aa11.49□□□□□ -0.57
PDGFB-202ENST00000381551 A8MZ25 164 aa11.48□□□□□ -0.57
PDGFB-202ENST00000381551 H3BTX0 84 aa11.48□□□□□ -0.57
PDGFB-202ENST00000381551 HMGB3O15347 200 aaKnown RBP11.48□□□□□ -0.57
PDGFB-202ENST00000381551 STAG3L2P0CL84 134 aa11.48□□□□□ -0.57
PDGFB-202ENST00000381551 STAG3L3P0CL85 134 aa11.48□□□□□ -0.57
PDGFB-202ENST00000381551 SNRPD3P62318 126 aaKnown RBP11.48□□□□□ -0.57
PDGFB-202ENST00000381551 ZNF726P1Q15940 193 aa11.48□□□□□ -0.57
PDGFB-202ENST00000381551 KHDC3LQ587J8 217 aa11.48□□□□□ -0.57
PDGFB-202ENST00000381551 DEFB121Q5J5C9 76 aa11.48□□□□□ -0.57
PDGFB-202ENST00000381551 IGFL4Q6B9Z1 124 aa11.48□□□□□ -0.57
PDGFB-202ENST00000381551 EIF5AL1Q6IS14 154 aaKnown RBP11.48□□□□□ -0.57
PDGFB-202ENST00000381551 LCN15Q6UWW0 184 aa11.48□□□□□ -0.57
PDGFB-202ENST00000381551 APRG1Q8IVJ8 170 aa11.48□□□□□ -0.57
PDGFB-202ENST00000381551 LINC00052Q96N35 136 aa11.48□□□□□ -0.57
PDGFB-202ENST00000381551 TRBV19A0A075B6N1 114 aa11.47□□□□□ -0.57
PDGFB-202ENST00000381551 BOLA2-SMG1P6H3BVE0 249 aa11.47□□□□□ -0.57
PDGFB-202ENST00000381551 OR7C2O60412 319 aa11.47□□□□□ -0.57
PDGFB-202ENST00000381551 NDUFB4O95168 129 aa11.47□□□□□ -0.57
PDGFB-202ENST00000381551 OR10J4P0C629 311 aa11.47□□□□□ -0.57
PDGFB-202ENST00000381551 NBEAP1P0C6P0 100 aa11.47□□□□□ -0.57
PDGFB-202ENST00000381551 IGHV4-30-4P0DP06 118 aa11.47□□□□□ -0.57
PDGFB-202ENST00000381551 FHITP49789 147 aa11.47□□□□□ -0.57
PDGFB-202ENST00000381551 ZNF124Q15973 351 aa11.47□□□□□ -0.57
PDGFB-202ENST00000381551 PSMG4Q5JS54 123 aa11.47□□□□□ -0.57
PDGFB-202ENST00000381551 PQLC2Q6ZP29 291 aa11.47□□□□□ -0.57
PDGFB-202ENST00000381551 SSX7Q7RTT5 188 aa11.47□□□□□ -0.57
PDGFB-202ENST00000381551 LRRC20Q8TCA0 184 aa11.47□□□□□ -0.57
PDGFB-202ENST00000381551 C20orf173Q96LM9 149 aa11.47□□□□□ -0.57
PDGFB-202ENST00000381551 CITED4Q96RK1 184 aa11.47□□□□□ -0.57
PDGFB-202ENST00000381551 ZNF331Q9NQX6 463 aaPredicted RBP11.47□□□□□ -0.57
PDGFB-202ENST00000381551 CTXND1A0A1B0GTU2 59 aa11.46□□□□□ -0.57
PDGFB-202ENST00000381551 SLC17A3O00476 420 aa11.46□□□□□ -0.57
PDGFB-202ENST00000381551 ZNF253O75346 499 aa11.46□□□□□ -0.57
PDGFB-202ENST00000381551 MRAPQ8TCY5 172 aa11.46□□□□□ -0.57
PDGFB-202ENST00000381551 BLNKQ8WV28 456 aa11.46□□□□□ -0.57
PDGFB-202ENST00000381551 SLC50A1Q9BRV3 221 aa11.46□□□□□ -0.57
PDGFB-202ENST00000381551 ARL14EPLP0DKL9 152 aa11.45□□□□□ -0.58
PDGFB-202ENST00000381551 PDE6HQ13956 83 aa11.45□□□□□ -0.58
PDGFB-202ENST00000381551 DPPA3Q6W0C5 159 aa11.45□□□□□ -0.58
PDGFB-202ENST00000381551 LINC00322Q6ZN03 302 aaPredicted RBP11.45□□□□□ -0.58
PDGFB-202ENST00000381551 RNF182Q8N6D2 247 aa11.45□□□□□ -0.58
PDGFB-202ENST00000381551 TUBA4BQ9H853 241 aa11.45□□□□□ -0.58
PDGFB-202ENST00000381551 SRD5A3Q9H8P0 318 aa11.45□□□□□ -0.58
PDGFB-202ENST00000381551 CXorf1O96002 111 aa11.44□□□□□ -0.58
PDGFB-202ENST00000381551 HLA-DMBP28068 263 aa11.44□□□□□ -0.58
PDGFB-202ENST00000381551 UBE2L3P68036 154 aaKnown RBP11.44□□□□□ -0.58
PDGFB-202ENST00000381551 PSG9Q00887 426 aa11.44□□□□□ -0.58
PDGFB-202ENST00000381551 PSG3Q16557 428 aa11.44□□□□□ -0.58
PDGFB-202ENST00000381551 SUN5Q8TC36 379 aa11.44□□□□□ -0.58
PDGFB-202ENST00000381551 MBD3L1Q8WWY6 194 aa11.44□□□□□ -0.58
PDGFB-202ENST00000381551 CLEC5AQ9NY25 188 aa11.44□□□□□ -0.58
PDGFB-202ENST00000381551 RBMY1BA6NDE4 496 aaKnown RBP11.43□□□□□ -0.58
PDGFB-202ENST00000381551 RBMY1EA6NEQ0 496 aaKnown RBP11.43□□□□□ -0.58
PDGFB-202ENST00000381551 KNCNA6PVL3 124 aa11.43□□□□□ -0.58
PDGFB-202ENST00000381551 RBMY1DP0C7P1 496 aaKnown RBP11.43□□□□□ -0.58
PDGFB-202ENST00000381551 FRMD6-AS1P0C7T7 363 aa11.43□□□□□ -0.58
PDGFB-202ENST00000381551 GCHFRP30047 84 aa11.43□□□□□ -0.58
PDGFB-202ENST00000381551 SULT1A2P50226 295 aa11.43□□□□□ -0.58
PDGFB-202ENST00000381551 RAB5CP51148 216 aa11.43□□□□□ -0.58
PDGFB-202ENST00000381551 DEFB1P60022 68 aa11.43□□□□□ -0.58
PDGFB-202ENST00000381551 FAM213BQ8TBF2 198 aa11.43□□□□□ -0.58
PDGFB-202ENST00000381551 PHYHIPLQ96FC7 376 aa11.43□□□□□ -0.58
PDGFB-202ENST00000381551 MAP1LC3B2A6NCE7 125 aa11.42□□□□□ -0.58
PDGFB-202ENST00000381551 RANP62826 216 aaKnown RBP11.42□□□□□ -0.58
PDGFB-202ENST00000381551 ACTL10Q5JWF8 245 aa11.42□□□□□ -0.58
PDGFB-202ENST00000381551 GDF5OSQ5U4N7 250 aa11.42□□□□□ -0.58
PDGFB-202ENST00000381551 LYPD1Q8N2G4 141 aa11.42□□□□□ -0.58
PDGFB-202ENST00000381551 EXOC3-AS1Q8N2X6 119 aa11.42□□□□□ -0.58
PDGFB-202ENST00000381551 MAP1LC3BQ9GZQ8 125 aa11.42□□□□□ -0.58
PDGFB-202ENST00000381551 SAV1Q9H4B6 383 aaPredicted RBP11.42□□□□□ -0.58
PDGFB-202ENST00000381551 ZNF705FA8MVS1 300 aaPredicted RBP11.41□□□□□ -0.58
PDGFB-202ENST00000381551 FGF8P55075 233 aaPredicted RBP11.41□□□□□ -0.58
PDGFB-202ENST00000381551 FOXI2Q6ZQN5 318 aa11.41□□□□□ -0.58
PDGFB-202ENST00000381551 SFT2D1Q8WV19 159 aa11.41□□□□□ -0.58
PDGFB-202ENST00000381551 TMPRSS5Q9H3S3 457 aa11.41□□□□□ -0.58
PDGFB-202ENST00000381551 TMEM167BQ9NRX6 74 aa11.41□□□□□ -0.58
PDGFB-202ENST00000381551 PRKDCP78527 4128 aaKnown RBP11.4□□□□□ -0.58
PDGFB-202ENST00000381551 LOC102724200A0A096LPH7 203 aaPredicted RBP11.4□□□□□ -0.58
PDGFB-202ENST00000381551 A0A0J9YX75 114 aa11.4□□□□□ -0.58
PDGFB-202ENST00000381551 F6UB75 175 aa11.4□□□□□ -0.58
PDGFB-202ENST00000381551 H3BMM0 161 aa11.4□□□□□ -0.58
PDGFB-202ENST00000381551 H2AFB1P0C5Y9 115 aa11.4□□□□□ -0.58
PDGFB-202ENST00000381551 ICAM4Q14773 271 aa11.4□□□□□ -0.58
PDGFB-202ENST00000381551 FAM74A1Q5RGS3 127 aa11.4□□□□□ -0.58
PDGFB-202ENST00000381551 ALKAL2Q6UX46 152 aa11.4□□□□□ -0.58
PDGFB-202ENST00000381551 TRPT1Q86TN4 253 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms