RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 PSG3Q16557 428 aa11.86□□□□□ -0.51
SMN2-201ENST00000380741 C1orf134Q5TEV5 83 aa11.86□□□□□ -0.51
SMN2-201ENST00000380741 TRIQKQ629K1 86 aa11.86□□□□□ -0.51
SMN2-201ENST00000380741 PATE2Q6UY27 113 aa11.86□□□□□ -0.51
SMN2-201ENST00000380741 LINC01587Q99440 93 aa11.86□□□□□ -0.51
SMN2-201ENST00000380741 RBM38Q9H0Z9 239 aaKnown RBP11.86□□□□□ -0.51
SMN2-201ENST00000380741 NPVFQ9HCQ7 196 aa11.86□□□□□ -0.51
SMN2-201ENST00000380741 HSPG2P98160 4391 aa11.86□□□□□ -0.51
SMN2-201ENST00000380741 FNDC10F2Z333 226 aa11.85□□□□□ -0.51
SMN2-201ENST00000380741 K7EPK0 472 aa11.85□□□□□ -0.51
SMN2-201ENST00000380741 MRPS12O15235 138 aaKnown RBP11.85□□□□□ -0.51
SMN2-201ENST00000380741 SCGB1D2O95969 90 aa11.85□□□□□ -0.51
SMN2-201ENST00000380741 ANXA7P20073 488 aaKnown RBP11.85□□□□□ -0.51
SMN2-201ENST00000380741 FAM3BP58499 235 aaPredicted RBP11.85□□□□□ -0.51
SMN2-201ENST00000380741 TEPPQ6URK8 271 aa11.85□□□□□ -0.51
SMN2-201ENST00000380741 LRRC20Q8TCA0 184 aa11.85□□□□□ -0.51
SMN2-201ENST00000380741 ARV1Q9H2C2 271 aa11.85□□□□□ -0.51
SMN2-201ENST00000380741 PPP1R14DQ9NXH3 145 aa11.85□□□□□ -0.51
SMN2-201ENST00000380741 LINC00854A0A1B0GVQ3 168 aa11.84□□□□□ -0.51
SMN2-201ENST00000380741 F5H768 121 aa11.84□□□□□ -0.51
SMN2-201ENST00000380741 BTCP35070 178 aa11.84□□□□□ -0.51
SMN2-201ENST00000380741 IAH1Q2TAA2 248 aaPredicted RBP11.84□□□□□ -0.51
SMN2-201ENST00000380741 C4orf46Q504U0 113 aa11.84□□□□□ -0.51
SMN2-201ENST00000380741 S100A7AQ86SG5 101 aa11.84□□□□□ -0.51
SMN2-201ENST00000380741 ZNF575Q86XF7 245 aa11.84□□□□□ -0.51
SMN2-201ENST00000380741 TMEM256Q8N2U0 113 aa11.84□□□□□ -0.51
SMN2-201ENST00000380741 OR10P1Q8NGE3 313 aa11.84□□□□□ -0.51
SMN2-201ENST00000380741 RPUSD4Q96CM3 377 aaKnown RBP11.84□□□□□ -0.51
SMN2-201ENST00000380741 ATG101Q9BSB4 218 aa11.84□□□□□ -0.51
SMN2-201ENST00000380741 MGAT4CQ9UBM8 478 aa11.84□□□□□ -0.51
SMN2-201ENST00000380741 RCL1Q9Y2P8 373 aaKnown RBP11.84□□□□□ -0.51
SMN2-201ENST00000380741 LRP1BQ9NZR2 4599 aa11.84□□□□□ -0.51
SMN2-201ENST00000380741 ABCA13Q86UQ4 5058 aa11.83□□□□□ -0.52
SMN2-201ENST00000380741 TSC22D2O75157 780 aa11.83□□□□□ -0.52
SMN2-201ENST00000380741 HTN1P15515 57 aa11.83□□□□□ -0.52
SMN2-201ENST00000380741 TAS2R60P59551 318 aa11.83□□□□□ -0.52
SMN2-201ENST00000380741 ARL16Q0P5N6 197 aa11.83□□□□□ -0.52
SMN2-201ENST00000380741 ZBTB8BQ8NAP8 495 aaPredicted RBP11.83□□□□□ -0.52
SMN2-201ENST00000380741 C16orf74Q96GX8 76 aa11.83□□□□□ -0.52
SMN2-201ENST00000380741 NUDT3O95989 172 aa11.82□□□□□ -0.52
SMN2-201ENST00000380741 ATP5G1P05496 136 aa11.82□□□□□ -0.52
SMN2-201ENST00000380741 SNRPCP09234 159 aaKnown RBP11.82□□□□□ -0.52
SMN2-201ENST00000380741 CDKN1BP46527 198 aa11.82□□□□□ -0.52
SMN2-201ENST00000380741 ATP5G3P48201 142 aa11.82□□□□□ -0.52
SMN2-201ENST00000380741 TAS2R30P59541 319 aa11.82□□□□□ -0.52
SMN2-201ENST00000380741 LCN15Q6UWW0 184 aa11.82□□□□□ -0.52
SMN2-201ENST00000380741 LINC00305Q7Z4B0 112 aa11.82□□□□□ -0.52
SMN2-201ENST00000380741 ZNF546Q86UE3 836 aa11.82□□□□□ -0.52
SMN2-201ENST00000380741 SDHCQ99643 169 aaPredicted RBP11.82□□□□□ -0.52
SMN2-201ENST00000380741 GSKIPQ9P0R6 139 aa11.82□□□□□ -0.52
SMN2-201ENST00000380741 RNF24Q9Y225 148 aa11.82□□□□□ -0.52
SMN2-201ENST00000380741 CBY3A6NI87 242 aa11.81□□□□□ -0.52
SMN2-201ENST00000380741 GOSR2O14653 212 aa11.81□□□□□ -0.52
SMN2-201ENST00000380741 AGPAT2O15120 278 aa11.81□□□□□ -0.52
SMN2-201ENST00000380741 CXCL2P19875 107 aa11.81□□□□□ -0.52
SMN2-201ENST00000380741 KIR3DS1Q14943 382 aa11.81□□□□□ -0.52
SMN2-201ENST00000380741 PXDC1Q5TGL8 231 aa11.81□□□□□ -0.52
SMN2-201ENST00000380741 ZNRF2Q8NHG8 242 aa11.81□□□□□ -0.52
SMN2-201ENST00000380741 ZNF331Q9NQX6 463 aaPredicted RBP11.81□□□□□ -0.52
SMN2-201ENST00000380741 NBDYA0A0U1RRE5 68 aa11.8□□□□□ -0.52
SMN2-201ENST00000380741 C7orf66A4D0T2 115 aa11.8□□□□□ -0.52
SMN2-201ENST00000380741 CENPXA8MT69 81 aa11.8□□□□□ -0.52
SMN2-201ENST00000380741 ZNF701M0R085 212 aaPredicted RBP11.8□□□□□ -0.52
SMN2-201ENST00000380741 MBPP02686 304 aaPredicted RBP11.8□□□□□ -0.52
SMN2-201ENST00000380741 RNASE8Q8TDE3 154 aaKnown RBP11.8□□□□□ -0.52
SMN2-201ENST00000380741 TMEM263Q8WUH6 116 aaKnown RBP11.8□□□□□ -0.52
SMN2-201ENST00000380741 MITD1Q8WV92 249 aa11.8□□□□□ -0.52
SMN2-201ENST00000380741 TMEM37Q8WXS4 190 aa11.8□□□□□ -0.52
SMN2-201ENST00000380741 MGST2Q99735 147 aa11.8□□□□□ -0.52
SMN2-201ENST00000380741 SLC50A1Q9BRV3 221 aa11.8□□□□□ -0.52
SMN2-201ENST00000380741 GGACTQ9BVM4 153 aa11.8□□□□□ -0.52
SMN2-201ENST00000380741 PARD6GQ9BYG4 376 aaPredicted RBP11.8□□□□□ -0.52
SMN2-201ENST00000380741 TIMM8BQ9Y5J9 83 aaPredicted RBP11.8□□□□□ -0.52
SMN2-201ENST00000380741 H3BTX0 84 aa11.79□□□□□ -0.52
SMN2-201ENST00000380741 H7BYZ3 331 aa11.79□□□□□ -0.52
SMN2-201ENST00000380741 SLC17A3O00476 420 aa11.79□□□□□ -0.52
SMN2-201ENST00000380741 COX7A2P2O60397 106 aa11.79□□□□□ -0.52
SMN2-201ENST00000380741 MORN5Q5VZ52 161 aa11.79□□□□□ -0.52
SMN2-201ENST00000380741 ZNF493Q6ZR52 646 aa11.79□□□□□ -0.52
SMN2-201ENST00000380741 BPIFA4PQ86YQ2 179 aa11.79□□□□□ -0.52
SMN2-201ENST00000380741 RNF141Q8WVD5 230 aa11.79□□□□□ -0.52
SMN2-201ENST00000380741 NOP10Q9NPE3 64 aaKnown RBP11.79□□□□□ -0.52
SMN2-201ENST00000380741 PRAC2D3DTV9 90 aa11.78□□□□□ -0.52
SMN2-201ENST00000380741 CCSO14618 274 aa11.78□□□□□ -0.52
SMN2-201ENST00000380741 CCL18P55774 89 aa11.78□□□□□ -0.52
SMN2-201ENST00000380741 TNP2Q05952 138 aa11.78□□□□□ -0.52
SMN2-201ENST00000380741 OPCMLQ14982 345 aa11.78□□□□□ -0.52
SMN2-201ENST00000380741 LINC00588Q9Y4M8 146 aa11.78□□□□□ -0.52
SMN2-201ENST00000380741 IGLC2P0DOY2 106 aa11.77□□□□□ -0.53
SMN2-201ENST00000380741 IL7P13232 177 aa11.77□□□□□ -0.53
SMN2-201ENST00000380741 GFI1BQ5VTD9 330 aa11.77□□□□□ -0.53
SMN2-201ENST00000380741 C10orf113Q5VZT2 155 aa11.77□□□□□ -0.53
SMN2-201ENST00000380741 C20orf144Q9BQM9 153 aa11.77□□□□□ -0.53
SMN2-201ENST00000380741 C20orf85Q9H1P6 137 aa11.77□□□□□ -0.53
SMN2-201ENST00000380741 H3BQ15 152 aa11.76□□□□□ -0.53
SMN2-201ENST00000380741 L7N2F9 121 aa11.76□□□□□ -0.53
SMN2-201ENST00000380741 VAMP2P63027 116 aa11.76□□□□□ -0.53
SMN2-201ENST00000380741 C6orf223Q8N319 242 aa11.76□□□□□ -0.53
SMN2-201ENST00000380741 OR10J6PQ8NGY7 276 aa11.76□□□□□ -0.53
SMN2-201ENST00000380741 PXMP4Q9Y6I8 212 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms