RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 IFI27L1Q96BM0 104 aa15.15■□□□□ 0.02
CNTNAP3B-203ENST00000377561 A0A0U1RRA0 63 aa15.15■□□□□ 0.02
CNTNAP3B-203ENST00000377561 HOXA3O43365 443 aaPredicted RBP15.15■□□□□ 0.02
CNTNAP3B-203ENST00000377561 CFHR2P36980 270 aa15.15■□□□□ 0.02
CNTNAP3B-203ENST00000377561 PRB4P10163 310 aaPredicted RBP15.14■□□□□ 0.01
CNTNAP3B-203ENST00000377561 PRTN3P24158 256 aa15.14■□□□□ 0.01
CNTNAP3B-203ENST00000377561 TMEM8BA6NDV4 472 aa15.14■□□□□ 0.01
CNTNAP3B-203ENST00000377561 EREGO14944 169 aa15.14■□□□□ 0.01
CNTNAP3B-203ENST00000377561 RCHY1Q96PM5 261 aa15.14■□□□□ 0.01
CNTNAP3B-203ENST00000377561 NDUFA4L2Q9NRX3 87 aa15.14■□□□□ 0.01
CNTNAP3B-203ENST00000377561 C15orf65H3BRN8 121 aa15.14■□□□□ 0.01
CNTNAP3B-203ENST00000377561 ZNF726P1Q15940 193 aa15.14■□□□□ 0.01
CNTNAP3B-203ENST00000377561 ZNF833PQ6ZTB9 187 aa15.14■□□□□ 0.01
CNTNAP3B-203ENST00000377561 LINC00158P58513 81 aa15.14■□□□□ 0.01
CNTNAP3B-203ENST00000377561 MORN3Q6PF18 240 aaPredicted RBP15.14■□□□□ 0.01
CNTNAP3B-203ENST00000377561 LYZL1Q6UWQ5 148 aa15.14■□□□□ 0.01
CNTNAP3B-203ENST00000377561 TRBV7-1A0A0A6YYK4 115 aa15.13■□□□□ 0.01
CNTNAP3B-203ENST00000377561 UBE2DNLQ8IWF7 75 aa15.13■□□□□ 0.01
CNTNAP3B-203ENST00000377561 SLC25A2Q9BXI2 301 aa15.13■□□□□ 0.01
CNTNAP3B-203ENST00000377561 SELENOKQ9Y6D0 94 aa15.13■□□□□ 0.01
CNTNAP3B-203ENST00000377561 MRPL27Q9P0M9 148 aaKnown RBP15.13■□□□□ 0.01
CNTNAP3B-203ENST00000377561 TDGF1P3P51864 188 aa15.13■□□□□ 0.01
CNTNAP3B-203ENST00000377561 CD300EQ496F6 205 aaPredicted RBP15.13■□□□□ 0.01
CNTNAP3B-203ENST00000377561 S100A7L2Q5SY68 101 aa15.13■□□□□ 0.01
CNTNAP3B-203ENST00000377561 H3BUX3 64 aa15.13■□□□□ 0.01
CNTNAP3B-203ENST00000377561 PFN1P07737 140 aaKnown RBP15.13■□□□□ 0.01
CNTNAP3B-203ENST00000377561 IGHV2-70P01814 119 aa15.12■□□□□ 0.01
CNTNAP3B-203ENST00000377561 COL6A6A6NMZ7 2263 aa15.12■□□□□ 0.01
CNTNAP3B-203ENST00000377561 LY6HO94772 140 aa15.12■□□□□ 0.01
CNTNAP3B-203ENST00000377561 IGHV3-64A0A075B6Q5 118 aa15.12■□□□□ 0.01
CNTNAP3B-203ENST00000377561 D6R8Y8 96 aa15.12■□□□□ 0.01
CNTNAP3B-203ENST00000377561 CKS1BP61024 79 aa15.12■□□□□ 0.01
CNTNAP3B-203ENST00000377561 TRAV8-1A0A0A6YYK1 113 aa15.12■□□□□ 0.01
CNTNAP3B-203ENST00000377561 GNLYP22749 145 aa15.12■□□□□ 0.01
CNTNAP3B-203ENST00000377561 LAGE3Q14657 143 aa15.12■□□□□ 0.01
CNTNAP3B-203ENST00000377561 MS4A6AQ9H2W1 248 aa15.12■□□□□ 0.01
CNTNAP3B-203ENST00000377561 GGTLC3B5MD39 225 aa15.12■□□□□ 0.01
CNTNAP3B-203ENST00000377561 K7ENP7 123 aa15.11■□□□□ 0.01
CNTNAP3B-203ENST00000377561 ZNF138P52744 262 aa15.11■□□□□ 0.01
CNTNAP3B-203ENST00000377561 IGLV3-9A0A075B6K5 115 aa15.11■□□□□ 0.01
CNTNAP3B-203ENST00000377561 SH2D1AO60880 128 aa15.11■□□□□ 0.01
CNTNAP3B-203ENST00000377561 SHANK2-AS3Q9BTD1 123 aa15.11■□□□□ 0.01
CNTNAP3B-203ENST00000377561 LINC01559Q495D7 138 aa15.11■□□□□ 0.01
CNTNAP3B-203ENST00000377561 TEX36Q5VZQ5 186 aa15.11■□□□□ 0.01
CNTNAP3B-203ENST00000377561 BRD3OSQ6XYD6 125 aa15.11■□□□□ 0.01
CNTNAP3B-203ENST00000377561 C9orf139Q6ZV77 190 aa15.11■□□□□ 0.01
CNTNAP3B-203ENST00000377561 MSRB2Q9Y3D2 182 aa15.11■□□□□ 0.01
CNTNAP3B-203ENST00000377561 SMPXQ9UHP9 88 aa15.11■□□□□ 0.01
CNTNAP3B-203ENST00000377561 A8MWP6 167 aa15.1■□□□□ 0.01
CNTNAP3B-203ENST00000377561 RPL36AP83881 106 aaKnown RBP15.1■□□□□ 0.01
CNTNAP3B-203ENST00000377561 DUX4L9Q6RFH8 374 aaPredicted RBP15.1■□□□□ 0.01
CNTNAP3B-203ENST00000377561 SSC4DQ8WTU2 575 aa15.1■□□□□ 0.01
CNTNAP3B-203ENST00000377561 RPL36ALQ969Q0 106 aaKnown RBP15.1■□□□□ 0.01
CNTNAP3B-203ENST00000377561 ZNF876PQ49A33 203 aa15.1■□□□□ 0.01
CNTNAP3B-203ENST00000377561 Q86TA4 180 aa15.1■□□□□ 0.01
CNTNAP3B-203ENST00000377561 LINC00479Q96M42 142 aa15.1■□□□□ 0.01
CNTNAP3B-203ENST00000377561 ORAOV1Q8WV07 137 aa15.1■□□□□ 0.01
CNTNAP3B-203ENST00000377561 ABCA1O95477 2261 aa15.1■□□□□ 0.01
CNTNAP3B-203ENST00000377561 CACNA1HO95180 2353 aa15.1■□□□□ 0.01
CNTNAP3B-203ENST00000377561 DIDO1Q9BTC0 2240 aaKnown RBP15.1■□□□□ 0.01
CNTNAP3B-203ENST00000377561 SRRM4A7MD48 611 aaKnown RBP15.1■□□□□ 0.01
CNTNAP3B-203ENST00000377561 PRR30Q53SZ7 412 aaPredicted RBP15.1■□□□□ 0.01
CNTNAP3B-203ENST00000377561 LCN12Q6JVE5 192 aa15.1■□□□□ 0.01
CNTNAP3B-203ENST00000377561 CST9LQ9H4G1 147 aa15.1■□□□□ 0.01
CNTNAP3B-203ENST00000377561 Q6ZSR3 168 aa15.09■□□□□ 0.01
CNTNAP3B-203ENST00000377561 HAPLN4Q86UW8 402 aa15.09■□□□□ 0.01
CNTNAP3B-203ENST00000377561 JPT2Q9H910 190 aa15.09■□□□□ 0.01
CNTNAP3B-203ENST00000377561 TRGV1A0A0A0MS02 117 aa15.09■□□□□ 0.01
CNTNAP3B-203ENST00000377561 IGHV3-73A0A0B4J1V6 119 aa15.09■□□□□ 0.01
CNTNAP3B-203ENST00000377561 C3orf79P0CE67 100 aa15.09■□□□□ 0.01
CNTNAP3B-203ENST00000377561 LYPD6Q86Y78 171 aa15.09■□□□□ 0.01
CNTNAP3B-203ENST00000377561 LINC00311Q8N616 119 aa15.09■□□□□ 0.01
CNTNAP3B-203ENST00000377561 PDE6HQ13956 83 aa15.08■□□□□ 0.01
CNTNAP3B-203ENST00000377561 ZNF562Q6V9R5 426 aa15.08■□□□□ 0.01
CNTNAP3B-203ENST00000377561 NCR2O95944 276 aa15.08■□□□□ 0
CNTNAP3B-203ENST00000377561 PRR31Q5SQ13 230 aa15.08■□□□□ 0
CNTNAP3B-203ENST00000377561 Q8TAT8 98 aa15.08■□□□□ 0
CNTNAP3B-203ENST00000377561 GFRA4Q9GZZ7 299 aa15.08■□□□□ 0
CNTNAP3B-203ENST00000377561 M0R2P5 195 aa15.08■□□□□ 0
CNTNAP3B-203ENST00000377561 FAM215AQ9Y5M1 114 aa15.08■□□□□ 0
CNTNAP3B-203ENST00000377561 LOXP28300 417 aaPredicted RBP15.07■□□□□ 0
CNTNAP3B-203ENST00000377561 ZNF134P52741 427 aa15.07■□□□□ 0
CNTNAP3B-203ENST00000377561 PIP4P2Q8N4L2 257 aa15.07■□□□□ 0
CNTNAP3B-203ENST00000377561 YLPM1P49750 1951 aaKnown RBP15.07■□□□□ 0
CNTNAP3B-203ENST00000377561 NBASA2RRP1 2371 aa15.07■□□□□ 0
CNTNAP3B-203ENST00000377561 TMEM238C9JI98 176 aa15.07■□□□□ 0
CNTNAP3B-203ENST00000377561 NDPQ00604 133 aa15.07■□□□□ 0
CNTNAP3B-203ENST00000377561 KRTAP27-1Q3LI81 207 aa15.07■□□□□ 0
CNTNAP3B-203ENST00000377561 KIF26AQ9ULI4 1882 aaPredicted RBP15.07■□□□□ 0
CNTNAP3B-203ENST00000377561 DEFB121Q5J5C9 76 aa15.07■□□□□ 0
CNTNAP3B-203ENST00000377561 USMG5Q96IX5 58 aa15.07■□□□□ 0
CNTNAP3B-203ENST00000377561 ERG28Q9UKR5 140 aa15.07■□□□□ 0
CNTNAP3B-203ENST00000377561 ATXN8Q156A1 80 aa15.06■□□□□ 0
CNTNAP3B-203ENST00000377561 LINC00477Q96M19 166 aa15.06■□□□□ 0
CNTNAP3B-203ENST00000377561 BPESC1Q9GZL8 116 aa15.06■□□□□ 0
CNTNAP3B-203ENST00000377561 FAM223BA6NKX1 122 aa15.06■□□□□ 0
CNTNAP3B-203ENST00000377561 SAA4P35542 130 aa15.06■□□□□ 0
CNTNAP3B-203ENST00000377561 Q0VG73 95 aa15.06■□□□□ 0
CNTNAP3B-203ENST00000377561 FAM223AQ8IWN6 122 aa15.06■□□□□ 0
CNTNAP3B-203ENST00000377561 ZNF479Q96JC4 524 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms