RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 CSTL1Q9H114 145 aa16.71■□□□□ 0.26
UPF3A-202ENST00000375299 LOC389332A0A1B0GUA5 103 aa16.7■□□□□ 0.26
UPF3A-202ENST00000375299 CNOT1A5YKK6 2376 aaKnown RBP16.7■□□□□ 0.26
UPF3A-202ENST00000375299 IGKV1-17P01599 117 aa16.7■□□□□ 0.26
UPF3A-202ENST00000375299 GTF2H5Q6ZYL4 71 aa16.7■□□□□ 0.26
UPF3A-202ENST00000375299 WFDC8Q8IUA0 241 aa16.7■□□□□ 0.26
UPF3A-202ENST00000375299 AP1S3Q96PC3 154 aa16.7■□□□□ 0.26
UPF3A-202ENST00000375299 U3KQK5 164 aa16.7■□□□□ 0.26
UPF3A-202ENST00000375299 TTC28Q96AY4 2481 aa16.7■□□□□ 0.26
UPF3A-202ENST00000375299 SERTM2A0A1B0GWG4 89 aa16.69■□□□□ 0.26
UPF3A-202ENST00000375299 K7EM74 188 aa16.69■□□□□ 0.26
UPF3A-202ENST00000375299 PRB4P10163 310 aaPredicted RBP16.69■□□□□ 0.26
UPF3A-202ENST00000375299 TNFRSF14Q92956 283 aa16.69■□□□□ 0.26
UPF3A-202ENST00000375299 JMJD8Q96S16 334 aa16.69■□□□□ 0.26
UPF3A-202ENST00000375299 KAAG1Q9UBP8 84 aa16.69■□□□□ 0.26
UPF3A-202ENST00000375299 PRSS33Q8NF86 280 aa16.69■□□□□ 0.26
UPF3A-202ENST00000375299 PRELID3AQ96N28 172 aa16.69■□□□□ 0.26
UPF3A-202ENST00000375299 MEGF9Q9H1U4 602 aa16.69■□□□□ 0.26
UPF3A-202ENST00000375299 FBXL15Q9H469 300 aa16.69■□□□□ 0.26
UPF3A-202ENST00000375299 IGHV1-3A0A0C4DH29 117 aa16.68■□□□□ 0.26
UPF3A-202ENST00000375299 SMAD7O15105 426 aaKnown RBP16.68■□□□□ 0.26
UPF3A-202ENST00000375299 CACNG7P62955 275 aa16.68■□□□□ 0.26
UPF3A-202ENST00000375299 HSD52Q0P140 79 aa16.68■□□□□ 0.26
UPF3A-202ENST00000375299 C8orf49Q96NF6 230 aa16.68■□□□□ 0.26
UPF3A-202ENST00000375299 INSIG2Q9Y5U4 225 aa16.68■□□□□ 0.26
UPF3A-202ENST00000375299 LAMA5O15230 3695 aa16.68■□□□□ 0.26
UPF3A-202ENST00000375299 CT45A10P0DMU9 189 aa16.67■□□□□ 0.26
UPF3A-202ENST00000375299 FAM104BQ5XKR9 115 aa16.67■□□□□ 0.26
UPF3A-202ENST00000375299 LYZL1Q6UWQ5 148 aa16.67■□□□□ 0.26
UPF3A-202ENST00000375299 OR9G4Q8NGQ1 327 aa16.67■□□□□ 0.26
UPF3A-202ENST00000375299 MALRD1Q5VYJ5 2156 aa16.67■□□□□ 0.26
UPF3A-202ENST00000375299 TMEM213A2RRL7 107 aa16.67■□□□□ 0.26
UPF3A-202ENST00000375299 SAP30O75446 220 aa16.67■□□□□ 0.26
UPF3A-202ENST00000375299 ORMDL3Q8N138 153 aa16.67■□□□□ 0.26
UPF3A-202ENST00000375299 FER1L6-AS1Q8NA97 138 aa16.67■□□□□ 0.26
UPF3A-202ENST00000375299 MGAQ8IWI9 3026 aa16.67■□□□□ 0.26
UPF3A-202ENST00000375299 A1L4Q6 167 aa16.66■□□□□ 0.26
UPF3A-202ENST00000375299 MRPS12O15235 138 aaKnown RBP16.66■□□□□ 0.26
UPF3A-202ENST00000375299 IGLV1-47P01700 117 aa16.66■□□□□ 0.26
UPF3A-202ENST00000375299 DLX1P56177 255 aa16.66■□□□□ 0.26
UPF3A-202ENST00000375299 BSPH1Q075Z2 132 aa16.66■□□□□ 0.26
UPF3A-202ENST00000375299 AMN1Q8IY45 258 aa16.66■□□□□ 0.26
UPF3A-202ENST00000375299 ZNF414Q96IQ9 312 aa16.66■□□□□ 0.26
UPF3A-202ENST00000375299 K7EP34 96 aa16.66■□□□□ 0.26
UPF3A-202ENST00000375299 M0R3E3 92 aa16.66■□□□□ 0.26
UPF3A-202ENST00000375299 HBDP02042 147 aa16.66■□□□□ 0.26
UPF3A-202ENST00000375299 FAM57AQ8TBR7 257 aa16.66■□□□□ 0.26
UPF3A-202ENST00000375299 THYN1Q9P016 225 aa16.66■□□□□ 0.26
UPF3A-202ENST00000375299 TMEM189A5PLL7 270 aa16.65■□□□□ 0.26
UPF3A-202ENST00000375299 H3BUT2 72 aa16.65■□□□□ 0.26
UPF3A-202ENST00000375299 SIVA1O15304 175 aa16.65■□□□□ 0.26
UPF3A-202ENST00000375299 KIR3DS1Q14943 382 aa16.65■□□□□ 0.26
UPF3A-202ENST00000375299 K7EIM0 57 aa16.65■□□□□ 0.26
UPF3A-202ENST00000375299 ZNF491Q8N8L2 437 aa16.65■□□□□ 0.26
UPF3A-202ENST00000375299 HILPDAQ9Y5L2 63 aa16.65■□□□□ 0.26
UPF3A-202ENST00000375299 PRB3Q04118 309 aaPredicted RBP16.64■□□□□ 0.25
UPF3A-202ENST00000375299 OR4X2Q8NGF9 303 aa16.64■□□□□ 0.25
UPF3A-202ENST00000375299 RNF125Q96EQ8 232 aa16.64■□□□□ 0.25
UPF3A-202ENST00000375299 SMG1Q96Q15 3661 aaKnown RBP16.64■□□□□ 0.25
UPF3A-202ENST00000375299 TMSB15BA0A087X1C1 80 aa16.64■□□□□ 0.25
UPF3A-202ENST00000375299 C16orf97H3BN30 126 aa16.64■□□□□ 0.25
UPF3A-202ENST00000375299 BUB1B-PAK6H3BSN5 160 aa16.64■□□□□ 0.25
UPF3A-202ENST00000375299 TCTAP57738 103 aa16.64■□□□□ 0.25
UPF3A-202ENST00000375299 PAX8Q06710 450 aa16.64■□□□□ 0.25
UPF3A-202ENST00000375299 MRPL51Q4U2R6 128 aaKnown RBP16.64■□□□□ 0.25
UPF3A-202ENST00000375299 ADAMTSL5Q6ZMM2 481 aa16.64■□□□□ 0.25
UPF3A-202ENST00000375299 FXYD7P58549 80 aa16.63■□□□□ 0.25
UPF3A-202ENST00000375299 A0A0G2JLM5 398 aa16.63■□□□□ 0.25
UPF3A-202ENST00000375299 IL4P05112 153 aa16.63■□□□□ 0.25
UPF3A-202ENST00000375299 PLGLAQ15195 96 aa16.63■□□□□ 0.25
UPF3A-202ENST00000375299 IFI27L1Q96BM0 104 aa16.63■□□□□ 0.25
UPF3A-202ENST00000375299 SRSF8Q9BRL6 282 aaKnown RBP16.63■□□□□ 0.25
UPF3A-202ENST00000375299 SH2D1AO60880 128 aa16.62■□□□□ 0.25
UPF3A-202ENST00000375299 ABCA1O95477 2261 aa16.62■□□□□ 0.25
UPF3A-202ENST00000375299 RP1L1Q8IWN7 2480 aaPredicted RBP16.62■□□□□ 0.25
UPF3A-202ENST00000375299 FCGR2BP31994 310 aaPredicted RBP16.62■□□□□ 0.25
UPF3A-202ENST00000375299 RNASE6Q93091 150 aaKnown RBP16.62■□□□□ 0.25
UPF3A-202ENST00000375299 NAA38Q9BRA0 125 aaKnown RBP16.62■□□□□ 0.25
UPF3A-202ENST00000375299 COL25A1Q9BXS0 654 aaPredicted RBP16.62■□□□□ 0.25
UPF3A-202ENST00000375299 AAMDCQ9H7C9 122 aa16.62■□□□□ 0.25
UPF3A-202ENST00000375299 THBDP07204 575 aa16.61■□□□□ 0.25
UPF3A-202ENST00000375299 OR2K2Q8NGT1 345 aa16.61■□□□□ 0.25
UPF3A-202ENST00000375299 PDE6HQ13956 83 aa16.6■□□□□ 0.25
UPF3A-202ENST00000375299 WI2-2373I1.2A0A1W2PRP0 233 aa16.6■□□□□ 0.25
UPF3A-202ENST00000375299 RPEQ96AT9 228 aa16.6■□□□□ 0.25
UPF3A-202ENST00000375299 G3V4G9 280 aa16.59■□□□□ 0.25
UPF3A-202ENST00000375299 CNIH1O95406 144 aa16.59■□□□□ 0.25
UPF3A-202ENST00000375299 NPYP01303 97 aa16.59■□□□□ 0.25
UPF3A-202ENST00000375299 NMUP48645 174 aa16.59■□□□□ 0.25
UPF3A-202ENST00000375299 PCP2Q8IVA1 136 aa16.59■□□□□ 0.25
UPF3A-202ENST00000375299 DYNLRB1Q9NP97 96 aa16.59■□□□□ 0.25
UPF3A-202ENST00000375299 A0A0G2JNJ9 132 aa16.59■□□□□ 0.25
UPF3A-202ENST00000375299 CKS2P33552 79 aa16.59■□□□□ 0.25
UPF3A-202ENST00000375299 RIPPLY3P57055 190 aa16.59■□□□□ 0.25
UPF3A-202ENST00000375299 RAB37Q96AX2 223 aa16.59■□□□□ 0.25
UPF3A-202ENST00000375299 ABHD17AQ96GS6 310 aa16.59■□□□□ 0.25
UPF3A-202ENST00000375299 RNF5Q99942 180 aa16.59■□□□□ 0.25
UPF3A-202ENST00000375299 Q9UFV3 132 aa16.59■□□□□ 0.25
UPF3A-202ENST00000375299 AKAP13Q12802 2813 aa16.59■□□□□ 0.25
UPF3A-202ENST00000375299 ZNF318Q5VUA4 2279 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms