RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 THAP8Q8NA92 274 aa16.36■□□□□ 0.21
TMEFF1-201ENST00000374879 RND1Q92730 232 aa16.36■□□□□ 0.21
TMEFF1-201ENST00000374879 SVILO95425 2214 aa16.36■□□□□ 0.21
TMEFF1-201ENST00000374879 PRRG2O14669 202 aa16.36■□□□□ 0.21
TMEFF1-201ENST00000374879 IGHV1-2P23083 117 aa16.36■□□□□ 0.21
TMEFF1-201ENST00000374879 WT1-ASQ06250 92 aa16.36■□□□□ 0.21
TMEFF1-201ENST00000374879 ZNF562Q6V9R5 426 aa16.36■□□□□ 0.21
TMEFF1-201ENST00000374879 PIFOQ8TCI5 191 aa16.36■□□□□ 0.21
TMEFF1-201ENST00000374879 APOMO95445 188 aa16.35■□□□□ 0.21
TMEFF1-201ENST00000374879 C12orf74Q32Q52 190 aa16.35■□□□□ 0.21
TMEFF1-201ENST00000374879 EXOC3-AS1Q8N2X6 119 aa16.35■□□□□ 0.21
TMEFF1-201ENST00000374879 CYSLTR1Q9Y271 337 aa16.35■□□□□ 0.21
TMEFF1-201ENST00000374879 U3KQK5 164 aa16.35■□□□□ 0.21
TMEFF1-201ENST00000374879 TMEM213A2RRL7 107 aa16.35■□□□□ 0.21
TMEFF1-201ENST00000374879 PSG8Q9UQ74 426 aa16.35■□□□□ 0.21
TMEFF1-201ENST00000374879 A0A1B0GW15 77 aa16.34■□□□□ 0.21
TMEFF1-201ENST00000374879 NPIPB5A8MRT5 1133 aa16.34■□□□□ 0.21
TMEFF1-201ENST00000374879 ZNF493Q6ZR52 646 aa16.34■□□□□ 0.21
TMEFF1-201ENST00000374879 GTSCR1Q86UQ5 136 aa16.34■□□□□ 0.21
TMEFF1-201ENST00000374879 ORMDL3Q8N138 153 aa16.34■□□□□ 0.21
TMEFF1-201ENST00000374879 ZCCHC24Q8N2G6 241 aaKnown RBP16.34■□□□□ 0.21
TMEFF1-201ENST00000374879 PPP1R35Q8TAP8 253 aa16.34■□□□□ 0.21
TMEFF1-201ENST00000374879 FOXI1Q12951 378 aa16.34■□□□□ 0.21
TMEFF1-201ENST00000374879 C10orf55Q5SWW7 151 aa16.34■□□□□ 0.21
TMEFF1-201ENST00000374879 OR11H12B2RN74 326 aa16.33■□□□□ 0.21
TMEFF1-201ENST00000374879 SMKR1H3BMG3 65 aa16.33■□□□□ 0.21
TMEFF1-201ENST00000374879 CDX4O14627 284 aaPredicted RBP16.33■□□□□ 0.21
TMEFF1-201ENST00000374879 OR11H1Q8NG94 326 aa16.33■□□□□ 0.21
TMEFF1-201ENST00000374879 OR11H2Q8NH07 326 aa16.33■□□□□ 0.21
TMEFF1-201ENST00000374879 DSPP15924 2871 aaKnown RBP16.33■□□□□ 0.21
TMEFF1-201ENST00000374879 AGRNO00468 2067 aa16.33■□□□□ 0.2
TMEFF1-201ENST00000374879 FAM104BQ5XKR9 115 aa16.33■□□□□ 0.2
TMEFF1-201ENST00000374879 DEFB123Q8N688 67 aa16.32■□□□□ 0.2
TMEFF1-201ENST00000374879 TMEM178AQ8NBL3 297 aa16.32■□□□□ 0.2
TMEFF1-201ENST00000374879 BOD1L1Q8NFC6 3051 aa16.32■□□□□ 0.2
TMEFF1-201ENST00000374879 CGB1A6NKQ9 187 aa16.32■□□□□ 0.2
TMEFF1-201ENST00000374879 FHL3Q13643 280 aa16.32■□□□□ 0.2
TMEFF1-201ENST00000374879 ODF1Q14990 250 aa16.32■□□□□ 0.2
TMEFF1-201ENST00000374879 MRPL51Q4U2R6 128 aaKnown RBP16.32■□□□□ 0.2
TMEFF1-201ENST00000374879 PGPEP1Q9NXJ5 209 aa16.32■□□□□ 0.2
TMEFF1-201ENST00000374879 ERG28Q9UKR5 140 aa16.32■□□□□ 0.2
TMEFF1-201ENST00000374879 CRIP1P50238 77 aa16.32■□□□□ 0.2
TMEFF1-201ENST00000374879 ZMAT4Q9H898 229 aa16.32■□□□□ 0.2
TMEFF1-201ENST00000374879 SSUH2Q9Y2M2 353 aa16.32■□□□□ 0.2
TMEFF1-201ENST00000374879 SRRM5B3KS81 715 aa16.31■□□□□ 0.2
TMEFF1-201ENST00000374879 NPYP01303 97 aa16.31■□□□□ 0.2
TMEFF1-201ENST00000374879 XGP55808 180 aa16.31■□□□□ 0.2
TMEFF1-201ENST00000374879 RITA1Q96K30 269 aa16.31■□□□□ 0.2
TMEFF1-201ENST00000374879 HARBI1Q96MB7 349 aa16.31■□□□□ 0.2
TMEFF1-201ENST00000374879 OTORQ9NRC9 128 aa16.31■□□□□ 0.2
TMEFF1-201ENST00000374879 KLRD1Q13241 179 aa16.3■□□□□ 0.2
TMEFF1-201ENST00000374879 LYZL1Q6UWQ5 148 aa16.3■□□□□ 0.2
TMEFF1-201ENST00000374879 RRN3P1Q2M238 152 aa16.3■□□□□ 0.2
TMEFF1-201ENST00000374879 DUX4L9Q6RFH8 374 aaPredicted RBP16.3■□□□□ 0.2
TMEFF1-201ENST00000374879 MAPKAPK5-AS1Q8N8E1 139 aa16.3■□□□□ 0.2
TMEFF1-201ENST00000374879 HOXB4P17483 251 aaPredicted RBP16.29■□□□□ 0.2
TMEFF1-201ENST00000374879 Q6ZUT4 128 aa16.29■□□□□ 0.2
TMEFF1-201ENST00000374879 NFE4Q86UQ8 179 aa16.29■□□□□ 0.2
TMEFF1-201ENST00000374879 GLMPQ8WWB7 406 aa16.29■□□□□ 0.2
TMEFF1-201ENST00000374879 TMSB15BA0A087X1C1 80 aa16.29■□□□□ 0.2
TMEFF1-201ENST00000374879 IGKCP01834 107 aa16.29■□□□□ 0.2
TMEFF1-201ENST00000374879 SRSF1Q07955 248 aaKnown RBP eCLIP16.29■□□□□ 0.2
TMEFF1-201ENST00000374879 SPRNQ5BIV9 151 aa16.29■□□□□ 0.2
TMEFF1-201ENST00000374879 FAM169BQ8N8A8 192 aa16.29■□□□□ 0.2
TMEFF1-201ENST00000374879 CNEP1R1Q8N9A8 125 aa16.29■□□□□ 0.2
TMEFF1-201ENST00000374879 OSR1Q8TAX0 266 aaPredicted RBP16.29■□□□□ 0.2
TMEFF1-201ENST00000374879 C1QTNF4Q9BXJ3 329 aa16.29■□□□□ 0.2
TMEFF1-201ENST00000374879 DSCAML1Q8TD84 2053 aa16.28■□□□□ 0.2
TMEFF1-201ENST00000374879 PLA2G2CQ5R387 149 aa16.28■□□□□ 0.2
TMEFF1-201ENST00000374879 FAM201AQ5SY85 155 aa16.28■□□□□ 0.2
TMEFF1-201ENST00000374879 ZC2HC1BQ5TFG8 222 aa16.28■□□□□ 0.2
TMEFF1-201ENST00000374879 PLXNB1O43157 2135 aa16.28■□□□□ 0.2
TMEFF1-201ENST00000374879 IGHV3-21A0A0B4J1V1 117 aa16.28■□□□□ 0.2
TMEFF1-201ENST00000374879 VSTM5A8MXK1 200 aa16.28■□□□□ 0.2
TMEFF1-201ENST00000374879 PRSS1P07477 247 aa16.28■□□□□ 0.2
TMEFF1-201ENST00000374879 LCNL1Q6ZST4 164 aa16.28■□□□□ 0.2
TMEFF1-201ENST00000374879 Q6ZT83 130 aa16.28■□□□□ 0.2
TMEFF1-201ENST00000374879 DSCAMO60469 2012 aa16.27■□□□□ 0.2
TMEFF1-201ENST00000374879 CKS2P33552 79 aa16.27■□□□□ 0.2
TMEFF1-201ENST00000374879 SMCPP49901 116 aaPredicted RBP16.27■□□□□ 0.2
TMEFF1-201ENST00000374879 SUB1P53999 127 aaKnown RBP eCLIP16.27■□□□□ 0.2
TMEFF1-201ENST00000374879 INS-IGF2F8WCM5 200 aa16.27■□□□□ 0.19
TMEFF1-201ENST00000374879 EVI2AP22794 236 aa16.27■□□□□ 0.19
TMEFF1-201ENST00000374879 KLF17Q5JT82 389 aaPredicted RBP16.27■□□□□ 0.19
TMEFF1-201ENST00000374879 Q6AWC8 147 aa16.27■□□□□ 0.19
TMEFF1-201ENST00000374879 FCER1GP30273 86 aa16.26■□□□□ 0.19
TMEFF1-201ENST00000374879 SHISA9B4DS77 424 aa16.26■□□□□ 0.19
TMEFF1-201ENST00000374879 PSMG4Q5JS54 123 aa16.26■□□□□ 0.19
TMEFF1-201ENST00000374879 C8orf46Q8TAG6 207 aa16.26■□□□□ 0.19
TMEFF1-201ENST00000374879 MRPL20Q9BYC9 149 aaKnown RBP16.26■□□□□ 0.19
TMEFF1-201ENST00000374879 TNFRSF1AP19438 455 aa16.25■□□□□ 0.19
TMEFF1-201ENST00000374879 LEPP41159 167 aa16.25■□□□□ 0.19
TMEFF1-201ENST00000374879 HCP5Q6MZN7 132 aa16.25■□□□□ 0.19
TMEFF1-201ENST00000374879 SHISA2Q6UWI4 295 aa16.25■□□□□ 0.19
TMEFF1-201ENST00000374879 HIST1H4GQ99525 98 aa16.25■□□□□ 0.19
TMEFF1-201ENST00000374879 IGKV3-15P01624 115 aa16.24■□□□□ 0.19
TMEFF1-201ENST00000374879 SRSF6Q13247 344 aaKnown RBP16.24■□□□□ 0.19
TMEFF1-201ENST00000374879 FOXC2Q99958 501 aa16.24■□□□□ 0.19
TMEFF1-201ENST00000374879 TMEM8BA6NDV4 472 aa16.24■□□□□ 0.19
TMEFF1-201ENST00000374879 C17orf77Q96MU5 243 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms