RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 RNASE7Q9H1E1 156 aaKnown RBP19.4■□□□□ 0.7
CTSA-203ENST00000372459 IGHV3-35A0A0C4DH35 117 aa19.39■□□□□ 0.7
CTSA-203ENST00000372459 BRI3O95415 125 aa19.39■□□□□ 0.7
CTSA-203ENST00000372459 RPL7P18124 248 aaKnown RBP19.39■□□□□ 0.7
CTSA-203ENST00000372459 IBA57Q5T440 356 aaKnown RBP19.39■□□□□ 0.7
CTSA-203ENST00000372459 NHLRC2Q8NBF2 726 aa19.39■□□□□ 0.7
CTSA-203ENST00000372459 C14orf144Q96I85 54 aa19.39■□□□□ 0.7
CTSA-203ENST00000372459 C17orf77Q96MU5 243 aa19.39■□□□□ 0.7
CTSA-203ENST00000372459 PDE6HQ13956 83 aa19.39■□□□□ 0.69
CTSA-203ENST00000372459 REC114Q7Z4M0 266 aa19.39■□□□□ 0.69
CTSA-203ENST00000372459 FSHBP01225 129 aa19.38■□□□□ 0.69
CTSA-203ENST00000372459 PPIFP30405 207 aaKnown RBP19.38■□□□□ 0.69
CTSA-203ENST00000372459 SIGLEC15Q6ZMC9 328 aa19.38■□□□□ 0.69
CTSA-203ENST00000372459 KRTAP1-3Q8IUG1 177 aa19.38■□□□□ 0.69
CTSA-203ENST00000372459 ZFAND3Q9H8U3 227 aa19.38■□□□□ 0.69
CTSA-203ENST00000372459 CENPEQ02224 2701 aa19.37■□□□□ 0.69
CTSA-203ENST00000372459 IGHV4-59P01825 116 aa19.37■□□□□ 0.69
CTSA-203ENST00000372459 RELQ04864 619 aaPredicted RBP19.37■□□□□ 0.69
CTSA-203ENST00000372459 RPEL1Q2QD12 228 aa19.37■□□□□ 0.69
CTSA-203ENST00000372459 NOL4LQ96MY1 436 aaPredicted RBP19.37■□□□□ 0.69
CTSA-203ENST00000372459 GPR82Q96P67 336 aa19.37■□□□□ 0.69
CTSA-203ENST00000372459 PSMG3-AS1Q96PY0 264 aa19.37■□□□□ 0.69
CTSA-203ENST00000372459 IER3P46695 156 aa19.37■□□□□ 0.69
CTSA-203ENST00000372459 TPPP2P59282 170 aa19.37■□□□□ 0.69
CTSA-203ENST00000372459 PRO1933Q9H354 126 aa19.37■□□□□ 0.69
CTSA-203ENST00000372459 C9orf139Q6ZV77 190 aa19.36■□□□□ 0.69
CTSA-203ENST00000372459 OR8I2Q8N0Y5 310 aa19.36■□□□□ 0.69
CTSA-203ENST00000372459 SGK494Q96LW2 274 aa19.36■□□□□ 0.69
CTSA-203ENST00000372459 NAV2Q8IVL1 2488 aa19.36■□□□□ 0.69
CTSA-203ENST00000372459 RAB9AP51151 201 aa19.35■□□□□ 0.69
CTSA-203ENST00000372459 CYB5R2Q6BCY4 276 aa19.35■□□□□ 0.69
CTSA-203ENST00000372459 CHD6Q8TD26 2715 aa19.35■□□□□ 0.69
CTSA-203ENST00000372459 Q6ZS46 218 aa19.35■□□□□ 0.69
CTSA-203ENST00000372459 FAM231DQ6ZW35 169 aa19.35■□□□□ 0.69
CTSA-203ENST00000372459 USMG5Q96IX5 58 aa19.35■□□□□ 0.69
CTSA-203ENST00000372459 IGHV3OR16-8A0A075B7F1 116 aa19.34■□□□□ 0.69
CTSA-203ENST00000372459 LTAP01374 205 aa19.34■□□□□ 0.69
CTSA-203ENST00000372459 IQCJQ1A5X6 159 aa19.34■□□□□ 0.69
CTSA-203ENST00000372459 AAMDCQ9H7C9 122 aa19.34■□□□□ 0.69
CTSA-203ENST00000372459 ABCA12Q86UK0 2595 aa19.34■□□□□ 0.69
CTSA-203ENST00000372459 GOLT1AQ6ZVE7 132 aa19.33■□□□□ 0.69
CTSA-203ENST00000372459 LINC00469Q8N7U9 141 aa19.33■□□□□ 0.69
CTSA-203ENST00000372459 SERTAD4Q9NUC0 356 aa19.33■□□□□ 0.69
CTSA-203ENST00000372459 ZNF705GA8MUZ8 300 aaPredicted RBP19.33■□□□□ 0.68
CTSA-203ENST00000372459 PSG9Q00887 426 aa19.33■□□□□ 0.68
CTSA-203ENST00000372459 HIST2H2BCQ6DN03 193 aa19.33■□□□□ 0.68
CTSA-203ENST00000372459 ZNF664Q8N3J9 261 aa19.33■□□□□ 0.68
CTSA-203ENST00000372459 MLST8Q9BVC4 326 aa19.33■□□□□ 0.68
CTSA-203ENST00000372459 ZNF580Q9UK33 172 aa19.33■□□□□ 0.68
CTSA-203ENST00000372459 CSPG4Q6UVK1 2322 aa19.33■□□□□ 0.68
CTSA-203ENST00000372459 K7EQM0 130 aa19.32■□□□□ 0.68
CTSA-203ENST00000372459 PRRC2AP48634 2157 aaKnown RBP19.32■□□□□ 0.68
CTSA-203ENST00000372459 DOPEY2Q9Y3R5 2298 aa19.31■□□□□ 0.68
CTSA-203ENST00000372459 CBLN1P23435 193 aa19.31■□□□□ 0.68
CTSA-203ENST00000372459 PRR27Q6MZM9 219 aa19.31■□□□□ 0.68
CTSA-203ENST00000372459 Q86TA4 180 aa19.31■□□□□ 0.68
CTSA-203ENST00000372459 TMEM256Q8N2U0 113 aa19.31■□□□□ 0.68
CTSA-203ENST00000372459 TRBV6-1A0A0K0K1D8 114 aa19.3■□□□□ 0.68
CTSA-203ENST00000372459 A8MWP6 167 aa19.3■□□□□ 0.68
CTSA-203ENST00000372459 BUB3O43684 328 aa19.3■□□□□ 0.68
CTSA-203ENST00000372459 PF4V1P10720 104 aa19.3■□□□□ 0.68
CTSA-203ENST00000372459 ARL3P36405 182 aa19.3■□□□□ 0.68
CTSA-203ENST00000372459 RPL19P84098 196 aaKnown RBP19.3■□□□□ 0.68
CTSA-203ENST00000372459 Q6YL49 198 aa19.3■□□□□ 0.68
CTSA-203ENST00000372459 TMEM75Q8N9X5 138 aa19.3■□□□□ 0.68
CTSA-203ENST00000372459 METTL26Q96S19 204 aa19.3■□□□□ 0.68
CTSA-203ENST00000372459 MRPL18Q9H0U6 180 aaKnown RBP19.3■□□□□ 0.68
CTSA-203ENST00000372459 CLPSL1A2RUU4 121 aa19.3■□□□□ 0.68
CTSA-203ENST00000372459 IGLV1-40P01703 118 aa19.3■□□□□ 0.68
CTSA-203ENST00000372459 ESDP10768 282 aa19.3■□□□□ 0.68
CTSA-203ENST00000372459 NUDT10Q8NFP7 164 aa19.3■□□□□ 0.68
CTSA-203ENST00000372459 NUDT11Q96G61 164 aa19.3■□□□□ 0.68
CTSA-203ENST00000372459 SMAD5-AS1Q9Y6J3 95 aa19.3■□□□□ 0.68
CTSA-203ENST00000372459 ZNF253O75346 499 aa19.29■□□□□ 0.68
CTSA-203ENST00000372459 IGLV2-11P01706 119 aa19.29■□□□□ 0.68
CTSA-203ENST00000372459 RAB4BP61018 213 aa19.29■□□□□ 0.68
CTSA-203ENST00000372459 TRAV8-1A0A0A6YYK1 113 aa19.28■□□□□ 0.68
CTSA-203ENST00000372459 DIRC3C9JPN6 131 aa19.28■□□□□ 0.68
CTSA-203ENST00000372459 CFHR3Q02985 330 aa19.28■□□□□ 0.68
CTSA-203ENST00000372459 GNB1LQ9BYB4 327 aa19.28■□□□□ 0.68
CTSA-203ENST00000372459 VPREB3Q9UKI3 123 aa19.28■□□□□ 0.68
CTSA-203ENST00000372459 TENM4Q6N022 2769 aa19.28■□□□□ 0.68
CTSA-203ENST00000372459 A0A0G2JLM5 398 aa19.28■□□□□ 0.68
CTSA-203ENST00000372459 SMIM27A0A1W2PRY6 76 aa19.28■□□□□ 0.68
CTSA-203ENST00000372459 CSN1S1P47710 185 aa19.28■□□□□ 0.68
CTSA-203ENST00000372459 COX19Q49B96 90 aa19.28■□□□□ 0.68
CTSA-203ENST00000372459 C1orf194Q5T5A4 169 aa19.28■□□□□ 0.68
CTSA-203ENST00000372459 PRNTQ86SH4 94 aa19.28■□□□□ 0.68
CTSA-203ENST00000372459 KLK15Q9H2R5 256 aa19.28■□□□□ 0.68
CTSA-203ENST00000372459 APCP25054 2843 aa19.27■□□□□ 0.68
CTSA-203ENST00000372459 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.27■□□□□ 0.68
CTSA-203ENST00000372459 A0A1B0GUS0 222 aa19.27■□□□□ 0.68
CTSA-203ENST00000372459 GRAMD2BQ96HH9 432 aa19.27■□□□□ 0.68
CTSA-203ENST00000372459 SERTM2A0A1B0GWG4 89 aa19.26■□□□□ 0.67
CTSA-203ENST00000372459 M0R3E3 92 aa19.26■□□□□ 0.67
CTSA-203ENST00000372459 MT-ND6P03923 174 aa19.26■□□□□ 0.67
CTSA-203ENST00000372459 PAFAH1B2P68402 229 aa19.26■□□□□ 0.67
CTSA-203ENST00000372459 WDR73Q6P4I2 378 aa19.26■□□□□ 0.67
CTSA-203ENST00000372459 ARL6IP6Q8N6S5 226 aa19.26■□□□□ 0.67
CTSA-203ENST00000372459 NDUFAF3Q9BU61 184 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 458.4 ms