RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 PPBPP02775 128 aa9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 MT-ATP8P03928 68 aa9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 CELA3BP08861 270 aa9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 CGB7P0DN87 165 aa9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 CCL1P22362 96 aa9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 KLF14Q8TD94 323 aaPredicted RBP9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 NUPR1O60356 82 aa9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 DRD3P35462 400 aa9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 MORN5Q5VZ52 161 aa9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 RPP25LQ8N5L8 163 aaKnown RBP9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 CYYR1Q96J86 154 aa9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 SHANK3Q9BYB0 1731 aa9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 GLI3P10071 1580 aa9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 WIPF3A6NGB9 483 aa9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 MORN3Q6PF18 240 aaPredicted RBP9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 C8orf46Q8TAG6 207 aa9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 NDUFS5O43920 106 aa9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 PEBP1P30086 187 aaKnown RBP9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 ZNF501Q96CX3 271 aaPredicted RBP9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 LHBP01229 141 aa9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 A0A1W2PQD3 144 aa9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 IGLC7A0M8Q6 106 aa9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 TAX1BP3O14907 124 aa9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 ATP1A1-AS1Q5TC04 95 aa9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 C8orf86Q6ZUL3 223 aa9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 IGHV3-53P01767 116 aa9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 CEND1Q8N111 149 aa9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 A0A1W2PR77 199 aa9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 SPSB3Q6PJ21 355 aa9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 SRSF7Q16629 238 aaKnown RBP eCLIP9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 C5orf47Q569G3 176 aa9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 TMEM54Q969K7 222 aa9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 A0A1W2PPV9 198 aa9.16□□□□□ -0.94
CDC42BPA-205ENST00000366769 CLPSP04118 112 aa9.15□□□□□ -0.94
CDC42BPA-205ENST00000366769 MESP2Q0VG99 397 aa9.15□□□□□ -0.94
CDC42BPA-205ENST00000366769 FAM27BQ5VT28 67 aa9.15□□□□□ -0.94
CDC42BPA-205ENST00000366769 ZC2HC1BQ5TFG8 222 aa9.15□□□□□ -0.94
CDC42BPA-205ENST00000366769 EFNB3Q15768 340 aa9.15□□□□□ -0.94
CDC42BPA-205ENST00000366769 CGB3P0DN86 165 aa9.15□□□□□ -0.94
CDC42BPA-205ENST00000366769 IGHV1-24A0A0C4DH33 117 aa9.15□□□□□ -0.94
CDC42BPA-205ENST00000366769 TIAF1O95411 115 aa9.15□□□□□ -0.94
CDC42BPA-205ENST00000366769 SLC25A48Q6ZT89 311 aaKnown RBP9.15□□□□□ -0.94
CDC42BPA-205ENST00000366769 PFN1P07737 140 aaKnown RBP9.15□□□□□ -0.95
CDC42BPA-205ENST00000366769 hADV29S1A0JD25 119 aa9.14□□□□□ -0.95
CDC42BPA-205ENST00000366769 TCRAP04437 139 aa9.14□□□□□ -0.95
CDC42BPA-205ENST00000366769 RPRMLQ8N4K4 120 aa9.14□□□□□ -0.95
CDC42BPA-205ENST00000366769 DEFB125Q8N687 156 aa9.14□□□□□ -0.95
CDC42BPA-205ENST00000366769 OSR1Q8TAX0 266 aaPredicted RBP9.14□□□□□ -0.95
CDC42BPA-205ENST00000366769 WFDC2Q14508 124 aa9.14□□□□□ -0.95
CDC42BPA-205ENST00000366769 OR13A1Q8NGR1 328 aa9.14□□□□□ -0.95
CDC42BPA-205ENST00000366769 PTGDSP41222 190 aa9.14□□□□□ -0.95
CDC42BPA-205ENST00000366769 FAM57AQ8TBR7 257 aa9.14□□□□□ -0.95
CDC42BPA-205ENST00000366769 TMEM243Q9BU79 118 aa9.14□□□□□ -0.95
CDC42BPA-205ENST00000366769 CFHR2P36980 270 aa9.14□□□□□ -0.95
CDC42BPA-205ENST00000366769 NDUFV3P56181 108 aaKnown RBP9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 FAM201AQ5SY85 155 aa9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 AMN1Q8IY45 258 aa9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 IFI27L2Q9H2X8 130 aa9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 FGFBP3Q8TAT2 258 aa9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 TM2D1Q9BX74 207 aa9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 ZNF474Q6S9Z5 364 aaPredicted RBP9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 SRSF1Q07955 248 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 FAM236AA0A1B0GUQ0 79 aa9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 FAM236BA0A1B0GV22 79 aa9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 RBM3P98179 157 aaKnown RBP9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 Q6AWC8 147 aa9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 PRB2P02812 416 aaPredicted RBP9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 RPL15P61313 204 aaKnown RBP9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 DPM3Q9P2X0 92 aa9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 B9A039 149 aa9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 CISD3P0C7P0 127 aa9.13□□□□□ -0.95
CDC42BPA-205ENST00000366769 TCTEX1D4Q5JR98 221 aa9.12□□□□□ -0.95
CDC42BPA-205ENST00000366769 PSMG4Q5JS54 123 aa9.12□□□□□ -0.95
CDC42BPA-205ENST00000366769 EFEMP2O95967 443 aa9.12□□□□□ -0.95
CDC42BPA-205ENST00000366769 APOBEC3AP31941 199 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPA-205ENST00000366769 ID3Q02535 119 aa9.12□□□□□ -0.95
CDC42BPA-205ENST00000366769 Q6ZUT4 128 aa9.12□□□□□ -0.95
CDC42BPA-205ENST00000366769 FABP5P3A8MUU1 101 aa9.12□□□□□ -0.95
CDC42BPA-205ENST00000366769 PCP2Q8IVA1 136 aa9.12□□□□□ -0.95
CDC42BPA-205ENST00000366769 TRAV25A0A0B4J276 109 aa9.12□□□□□ -0.95
CDC42BPA-205ENST00000366769 TRGV1A0A0A0MS02 117 aa9.12□□□□□ -0.95
CDC42BPA-205ENST00000366769 MYOD1P15172 320 aa9.12□□□□□ -0.95
CDC42BPA-205ENST00000366769 COX14Q96I36 57 aa9.12□□□□□ -0.95
CDC42BPA-205ENST00000366769 OTORQ9NRC9 128 aa9.12□□□□□ -0.95
CDC42BPA-205ENST00000366769 JPT1Q9UK76 154 aa9.12□□□□□ -0.95
CDC42BPA-205ENST00000366769 TRAV12-1A0A0B4J245 112 aa9.11□□□□□ -0.95
CDC42BPA-205ENST00000366769 LEPROTO15243 131 aa9.11□□□□□ -0.95
CDC42BPA-205ENST00000366769 POU2AF1Q16633 256 aa9.11□□□□□ -0.95
CDC42BPA-205ENST00000366769 C1orf159Q96HA4 380 aa9.11□□□□□ -0.95
CDC42BPA-205ENST00000366769 TRAV41A0A0B4J266 112 aa9.11□□□□□ -0.95
CDC42BPA-205ENST00000366769 BSPH1Q075Z2 132 aa9.11□□□□□ -0.95
CDC42BPA-205ENST00000366769 VWC2Q2TAL6 325 aa9.11□□□□□ -0.95
CDC42BPA-205ENST00000366769 PAQR4Q8N4S7 273 aaPredicted RBP9.11□□□□□ -0.95
CDC42BPA-205ENST00000366769 TMEM158Q8WZ71 300 aa9.11□□□□□ -0.95
CDC42BPA-205ENST00000366769 SMPXQ9UHP9 88 aa9.11□□□□□ -0.95
CDC42BPA-205ENST00000366769 PKIGQ9Y2B9 76 aa9.11□□□□□ -0.95
CDC42BPA-205ENST00000366769 MORN2Q502X0 79 aa9.11□□□□□ -0.95
CDC42BPA-205ENST00000366769 MUC6Q6W4X9 2439 aa9.11□□□□□ -0.95
CDC42BPA-205ENST00000366769 ERCC8Q13216 396 aa9.11□□□□□ -0.95
CDC42BPA-205ENST00000366769 C6orf226Q5I0X4 101 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms