RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 ZHX1-C8orf76Q96EF9 292 aa0.15□□□□□ -2.39
RNU4-1-201ENST00000363925 HYLS1Q96M11 299 aa0.15□□□□□ -2.39
RNU4-1-201ENST00000363925 CCDC94Q9BW85 323 aaPredicted RBP0.15□□□□□ -2.39
RNU4-1-201ENST00000363925 KRTAP2-4Q9BYR9 128 aa0.15□□□□□ -2.39
RNU4-1-201ENST00000363925 KRTAP2-1Q9BYU5 128 aa0.15□□□□□ -2.39
RNU4-1-201ENST00000363925 POPDC3Q9HBV1 291 aa0.15□□□□□ -2.39
RNU4-1-201ENST00000363925 SLC22A13Q9Y226 551 aa0.15□□□□□ -2.39
RNU4-1-201ENST00000363925 ARL2BPQ9Y2Y0 163 aa0.15□□□□□ -2.39
RNU4-1-201ENST00000363925 A0A087WSZ3 146 aa0.14□□□□□ -2.39
RNU4-1-201ENST00000363925 TRAV27A0A087WT01 109 aa0.14□□□□□ -2.39
RNU4-1-201ENST00000363925 GPR31O00270 319 aa0.14□□□□□ -2.39
RNU4-1-201ENST00000363925 EIF3IQ13347 325 aaKnown RBP0.14□□□□□ -2.39
RNU4-1-201ENST00000363925 RGS21Q2M5E4 152 aa0.14□□□□□ -2.39
RNU4-1-201ENST00000363925 TMEM14EPQ6UXP3 125 aa0.14□□□□□ -2.39
RNU4-1-201ENST00000363925 PPTC7Q8NI37 304 aa0.14□□□□□ -2.39
RNU4-1-201ENST00000363925 TEX37Q96LM6 180 aa0.14□□□□□ -2.39
RNU4-1-201ENST00000363925 PLB1Q6P1J6 1458 aa0.14□□□□□ -2.39
RNU4-1-201ENST00000363925 PTPRDP23468 1912 aa0.13□□□□□ -2.39
RNU4-1-201ENST00000363925 MUC5ACP98088 5654 aa0.13□□□□□ -2.39
RNU4-1-201ENST00000363925 hDV103S1A0JD37 113 aa0.13□□□□□ -2.39
RNU4-1-201ENST00000363925 C9orf170A2RU37 121 aa0.13□□□□□ -2.39
RNU4-1-201ENST00000363925 NDUFC2O95298 119 aa0.13□□□□□ -2.39
RNU4-1-201ENST00000363925 IGLV1-51P01701 117 aa0.13□□□□□ -2.39
RNU4-1-201ENST00000363925 NCALDP61601 193 aa0.13□□□□□ -2.39
RNU4-1-201ENST00000363925 KLRD1Q13241 179 aa0.13□□□□□ -2.39
RNU4-1-201ENST00000363925 PXT1Q8NFP0 134 aa0.13□□□□□ -2.39
RNU4-1-201ENST00000363925 MAP1LC3BQ9GZQ8 125 aa0.13□□□□□ -2.39
RNU4-1-201ENST00000363925 CACYBPQ9HB71 228 aaKnown RBP0.13□□□□□ -2.39
RNU4-1-201ENST00000363925 NUP210LQ5VU65 1888 aa0.13□□□□□ -2.39
RNU4-1-201ENST00000363925 CEP164Q9UPV0 1460 aa0.12□□□□□ -2.39
RNU4-1-201ENST00000363925 DUXBA0A1W2PPF3 345 aa0.12□□□□□ -2.39
RNU4-1-201ENST00000363925 IFNA4P05014 189 aa0.12□□□□□ -2.39
RNU4-1-201ENST00000363925 CRHP06850 196 aa0.12□□□□□ -2.39
RNU4-1-201ENST00000363925 ARPP19P56211 112 aa0.12□□□□□ -2.39
RNU4-1-201ENST00000363925 CCL7P80098 99 aa0.12□□□□□ -2.39
RNU4-1-201ENST00000363925 DGCR14Q96DF8 476 aaKnown RBP0.12□□□□□ -2.39
RNU4-1-201ENST00000363925 BCORL1Q5H9F3 1711 aa0.12□□□□□ -2.39
RNU4-1-201ENST00000363925 BCL9O00512 1426 aa0.12□□□□□ -2.39
RNU4-1-201ENST00000363925 G3V2T6 193 aa0.11□□□□□ -2.39
RNU4-1-201ENST00000363925 K7ERJ3 54 aa0.11□□□□□ -2.39
RNU4-1-201ENST00000363925 RER1O15258 196 aa0.11□□□□□ -2.39
RNU4-1-201ENST00000363925 LYRM1O43325 122 aa0.11□□□□□ -2.39
RNU4-1-201ENST00000363925 CD3DP04234 171 aa0.11□□□□□ -2.39
RNU4-1-201ENST00000363925 CXCL1P09341 107 aa0.11□□□□□ -2.39
RNU4-1-201ENST00000363925 PATE2Q6UY27 113 aa0.11□□□□□ -2.39
RNU4-1-201ENST00000363925 CASC2Q6XLA1 102 aa0.11□□□□□ -2.39
RNU4-1-201ENST00000363925 PLAC4Q8WY50 150 aa0.11□□□□□ -2.39
RNU4-1-201ENST00000363925 CCL19Q99731 98 aa0.11□□□□□ -2.39
RNU4-1-201ENST00000363925 PTPRZ1P23471 2315 aaPredicted RBP0.11□□□□□ -2.39
RNU4-1-201ENST00000363925 MIA2Q96PC5 1412 aa0.11□□□□□ -2.39
RNU4-1-201ENST00000363925 CCL4P13236 92 aa0.1□□□□□ -2.39
RNU4-1-201ENST00000363925 RPL37AP61513 92 aaKnown RBP0.1□□□□□ -2.39
RNU4-1-201ENST00000363925 VMA21Q3ZAQ7 101 aa0.1□□□□□ -2.39
RNU4-1-201ENST00000363925 LIMD2Q9BT23 127 aa0.1□□□□□ -2.39
RNU4-1-201ENST00000363925 OR2J1Q9GZK6 312 aa0.1□□□□□ -2.39
RNU4-1-201ENST00000363925 COL24A1Q17RW2 1714 aa0.1□□□□□ -2.39
RNU4-1-201ENST00000363925 N4BP2Q86UW6 1770 aaPredicted RBP0.09□□□□□ -2.39
RNU4-1-201ENST00000363925 UBR2Q8IWV8 1755 aa0.09□□□□□ -2.39
RNU4-1-201ENST00000363925 ODAMA1E959 279 aa0.09□□□□□ -2.4
RNU4-1-201ENST00000363925 HSPE1P61604 102 aaKnown RBP0.09□□□□□ -2.4
RNU4-1-201ENST00000363925 SNCBQ16143 134 aa0.09□□□□□ -2.4
RNU4-1-201ENST00000363925 AKIRIN2Q53H80 203 aa0.09□□□□□ -2.4
RNU4-1-201ENST00000363925 CEP19Q96LK0 163 aa0.09□□□□□ -2.4
RNU4-1-201ENST00000363925 PRAP1Q96NZ9 151 aa0.09□□□□□ -2.4
RNU4-1-201ENST00000363925 SPRR2GQ9BYE4 73 aa0.09□□□□□ -2.4
RNU4-1-201ENST00000363925 ERBINQ96RT1 1412 aa0.09□□□□□ -2.4
RNU4-1-201ENST00000363925 RFX7Q2KHR2 1363 aa0.08□□□□□ -2.4
RNU4-1-201ENST00000363925 AIPO00170 330 aa0.08□□□□□ -2.4
RNU4-1-201ENST00000363925 IFNA14P01570 189 aa0.08□□□□□ -2.4
RNU4-1-201ENST00000363925 CST2P09228 141 aa0.08□□□□□ -2.4
RNU4-1-201ENST00000363925 REEP5Q00765 189 aa0.08□□□□□ -2.4
RNU4-1-201ENST00000363925 MSMO1Q15800 293 aa0.08□□□□□ -2.4
RNU4-1-201ENST00000363925 SCGB2B2Q4G0G5 96 aa0.08□□□□□ -2.4
RNU4-1-201ENST00000363925 LINC00299Q6ZSB3 139 aa0.08□□□□□ -2.4
RNU4-1-201ENST00000363925 RMND5BQ96G75 393 aaPredicted RBP0.08□□□□□ -2.4
RNU4-1-201ENST00000363925 BDP1A6H8Y1 2624 aa0.07□□□□□ -2.4
RNU4-1-201ENST00000363925 PRORSD1PA6NEY8 169 aa0.07□□□□□ -2.4
RNU4-1-201ENST00000363925 APOA2P02652 100 aa0.07□□□□□ -2.4
RNU4-1-201ENST00000363925 PPP1R2P41236 205 aa0.07□□□□□ -2.4
RNU4-1-201ENST00000363925 INSL3P51460 131 aa0.07□□□□□ -2.4
RNU4-1-201ENST00000363925 GNG5P63218 68 aa0.07□□□□□ -2.4
RNU4-1-201ENST00000363925 MIR22HGQ0VDD5 57 aa0.07□□□□□ -2.4
RNU4-1-201ENST00000363925 DIAPH2-AS1Q14236 149 aa0.07□□□□□ -2.4
RNU4-1-201ENST00000363925 CROCCP2Q86T23 111 aa0.07□□□□□ -2.4
RNU4-1-201ENST00000363925 PAIP2Q9BPZ3 127 aaKnown RBP0.07□□□□□ -2.4
RNU4-1-201ENST00000363925 PBDC1Q9BVG4 233 aa0.07□□□□□ -2.4
RNU4-1-201ENST00000363925 ARMC1Q9NVT9 282 aa0.07□□□□□ -2.4
RNU4-1-201ENST00000363925 IGF2RP11717 2491 aa0.06□□□□□ -2.4
RNU4-1-201ENST00000363925 RIIAD1A6NNX1 92 aa0.06□□□□□ -2.4
RNU4-1-201ENST00000363925 H7C1C5 153 aa0.06□□□□□ -2.4
RNU4-1-201ENST00000363925 HIST1H2BKO60814 126 aa0.06□□□□□ -2.4
RNU4-1-201ENST00000363925 HIST1H2BJP06899 126 aa0.06□□□□□ -2.4
RNU4-1-201ENST00000363925 IDO1P14902 403 aa0.06□□□□□ -2.4
RNU4-1-201ENST00000363925 OGNP20774 298 aaKnown RBP0.06□□□□□ -2.4
RNU4-1-201ENST00000363925 LCN6P62502 163 aa0.06□□□□□ -2.4
RNU4-1-201ENST00000363925 TMED2Q15363 201 aa0.06□□□□□ -2.4
RNU4-1-201ENST00000363925 AKR1C8PQ5T2L2 129 aa0.06□□□□□ -2.4
RNU4-1-201ENST00000363925 FOXI2Q6ZQN5 318 aa0.06□□□□□ -2.4
RNU4-1-201ENST00000363925 FAM216BQ8N7L0 139 aa0.06□□□□□ -2.4
RNU4-1-201ENST00000363925 NABP2Q9BQ15 211 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms