RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 PLGLAQ15195 96 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 RPL22L1Q6P5R6 122 aaKnown RBP3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 C6orf201Q7Z4U5 140 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 GALMQ96C23 342 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 PGLYRP3Q96LB9 341 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 SPACA1Q9HBV2 294 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 ZNF257Q9Y2Q1 563 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 AP4S1Q9Y587 144 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 NUPR2A6NF83 97 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 SLC22A1O15245 554 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 CRTAPO75718 401 aaPredicted RBP3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 HLA-DQA1P01909 254 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 CBLN1P23435 193 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 TAS2R31P59538 309 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 PPP3R1P63098 170 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 PAFAH1B2P68402 229 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 RHOGP84095 191 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 DEFB135Q30KP9 77 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 CCDC58Q4VC31 144 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 C10orf55Q5SWW7 151 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 CIRBP-AS1Q8TBR5 109 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 SMIM19Q96E16 107 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 CPNE2Q96FN4 548 aaPredicted RBP3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 CENPNQ96H22 339 aaPredicted RBP3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 USMG5Q96IX5 58 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 TSNAXQ99598 290 aaKnown RBP3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 BABAM2Q9NXR7 383 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 COA4Q9NYJ1 87 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 ENOPH1Q9UHY7 261 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 OR51B2Q9Y5P1 312 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 S4R3C0 116 aa3.32□□□□□ -1.88
RNU4-39P-201ENST00000362455 LOC102724200A0A096LPH7 203 aaPredicted RBP3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 BOLA2-SMG1P6H3BVE0 249 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 LGALS9O00182 355 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 CD2P06729 351 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 ZNF688P0C7X2 276 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 LINC00869P0C866 280 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 C8orf88P0DMB2 117 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 CD40LGP29965 261 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 OPRK1P41145 380 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 LGALS7P47929 136 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 LINC00315P59091 139 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 ATP5G2Q06055 141 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 EIF4EBP1Q13541 118 aaPredicted RBP3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 GPR176Q14439 515 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 PRSS8Q16651 343 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 Q499Y3 187 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 DNAL1Q4LDG9 190 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 C5orf47Q569G3 176 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 UNQ9165/PRO28630Q6UXU0 137 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 IDO2Q6ZQW0 420 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 PDPNQ86YL7 162 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 RXFP4Q8TDU9 374 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 MITD1Q8WV92 249 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 DERL3Q96Q80 235 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 S100A13Q99584 98 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 C8orf17Q9NRJ1 99 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 SDHAF2Q9NX18 166 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 TP53TG1Q9Y2A0 90 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 LRRC42Q9Y546 428 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 RFNGQ9Y644 331 aa3.31□□□□□ -1.88
RNU4-39P-201ENST00000362455 IGLV4-60A0A075B6I1 120 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 IGKV2-28A0A075B6P5 120 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 FAM223BA6NKX1 122 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 TMEM14DPA8MWL7 114 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 M0R1X1 148 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 TAAR5O14804 337 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 RTL8CO15255 209 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 ATP8B1O43520 1251 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 CCNKO75909 580 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 IGKV2D-28P01615 120 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 KLK9Q2XQG4 91 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 RNASE13Q5GAN3 156 aaKnown RBP3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 LAIR2Q6ISS4 152 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 ZFP1Q6P2D0 407 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 GPHB5Q86YW7 130 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 FAM223AQ8IWN6 122 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 TMEM256Q8N2U0 113 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 TTC9CQ8N5M4 171 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 ZNF645Q8N7E2 425 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 DYNLRB2Q8TF09 96 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 PYDC1Q8WXC3 89 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 KCNS1Q96KK3 526 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 RSG1Q9BU20 258 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 LPAR5Q9H1C0 372 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 PRO0461Q9UI25 63 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 AK3Q9UIJ7 227 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 KLK9Q9UKQ9 250 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 APLNQ9ULZ1 77 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 FLVCR2Q9UPI3 526 aa3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 KLK5Q9Y337 293 aaPredicted RBP3.3□□□□□ -1.88
RNU4-39P-201ENST00000362455 PNMA8CA0A1B0GUJ8 204 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 LOC100130705A0A1B0GUX0 176 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 A8MWP6 167 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 BET1O15155 118 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 DEFB4AO15263 64 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 GGCTO75223 188 aaKnown RBP3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 GCGP01275 180 aa3.29□□□□□ -1.88
RNU4-39P-201ENST00000362455 NPY1RP25929 384 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms