RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 HEATR5AQ86XA9 2040 aa11.27□□□□□ -0.61
SMC5-201ENST00000361138 CSTL1Q9H114 145 aa11.27□□□□□ -0.61
SMC5-201ENST00000361138 OVOL1O14753 267 aa11.26□□□□□ -0.61
SMC5-201ENST00000361138 MRPL51Q4U2R6 128 aaKnown RBP11.26□□□□□ -0.61
SMC5-201ENST00000361138 RRN3P1Q2M238 152 aa11.26□□□□□ -0.61
SMC5-201ENST00000361138 FAM168AQ92567 244 aa11.26□□□□□ -0.61
SMC5-201ENST00000361138 FXYD5Q96DB9 178 aa11.26□□□□□ -0.61
SMC5-201ENST00000361138 C11orf1Q9H5F2 150 aa11.26□□□□□ -0.61
SMC5-201ENST00000361138 SIGLEC8Q9NYZ4 499 aa11.26□□□□□ -0.61
SMC5-201ENST00000361138 TMEM178BH3BS89 294 aa11.26□□□□□ -0.61
SMC5-201ENST00000361138 ZNRD1Q9P1U0 126 aa11.26□□□□□ -0.61
SMC5-201ENST00000361138 DENND4CQ5VZ89 1909 aa11.26□□□□□ -0.61
SMC5-201ENST00000361138 CD28P10747 220 aa11.26□□□□□ -0.61
SMC5-201ENST00000361138 IGFL4Q6B9Z1 124 aa11.26□□□□□ -0.61
SMC5-201ENST00000361138 DPH3P1Q9H4G8 78 aa11.26□□□□□ -0.61
SMC5-201ENST00000361138 PDE6HQ13956 83 aa11.25□□□□□ -0.61
SMC5-201ENST00000361138 MDS2Q8NDY4 140 aa11.25□□□□□ -0.61
SMC5-201ENST00000361138 TMEM101Q96IK0 257 aa11.25□□□□□ -0.61
SMC5-201ENST00000361138 TRIOBPQ9H2D6 2365 aa11.25□□□□□ -0.61
SMC5-201ENST00000361138 ZNF833PQ6ZTB9 187 aa11.25□□□□□ -0.61
SMC5-201ENST00000361138 C17orf58Q2M2W7 97 aa11.25□□□□□ -0.61
SMC5-201ENST00000361138 Q8N8P6 123 aa11.25□□□□□ -0.61
SMC5-201ENST00000361138 PIMREGQ9BSJ6 248 aa11.25□□□□□ -0.61
SMC5-201ENST00000361138 LTAP01374 205 aa11.25□□□□□ -0.61
SMC5-201ENST00000361138 NEU4Q8WWR8 484 aaPredicted RBP11.25□□□□□ -0.61
SMC5-201ENST00000361138 IGKV3OR2-268A0A0C4DH90 116 aa11.24□□□□□ -0.61
SMC5-201ENST00000361138 KRTAP27-1Q3LI81 207 aa11.24□□□□□ -0.61
SMC5-201ENST00000361138 SCRT2Q9NQ03 307 aa11.24□□□□□ -0.61
SMC5-201ENST00000361138 BUB1B-PAK6H3BSN5 160 aa11.24□□□□□ -0.61
SMC5-201ENST00000361138 K7ERJ3 54 aa11.24□□□□□ -0.61
SMC5-201ENST00000361138 CNTFRP26992 372 aa11.24□□□□□ -0.61
SMC5-201ENST00000361138 C2orf82Q6UX34 121 aa11.24□□□□□ -0.61
SMC5-201ENST00000361138 PHF3Q92576 2039 aaKnown RBP11.24□□□□□ -0.61
SMC5-201ENST00000361138 PLEKHB2Q96CS7 222 aa11.24□□□□□ -0.61
SMC5-201ENST00000361138 LRRK1Q38SD2 2015 aa11.24□□□□□ -0.61
SMC5-201ENST00000361138 MYMXA0A1B0GTQ4 84 aa11.24□□□□□ -0.61
SMC5-201ENST00000361138 DUX3Q96PT4 197 aa11.24□□□□□ -0.61
SMC5-201ENST00000361138 TRBV19A0A075B6N1 114 aa11.23□□□□□ -0.61
SMC5-201ENST00000361138 ERCC8Q13216 396 aa11.23□□□□□ -0.61
SMC5-201ENST00000361138 NUP37Q8NFH4 326 aa11.23□□□□□ -0.61
SMC5-201ENST00000361138 ALPK3Q96L96 1907 aa11.23□□□□□ -0.61
SMC5-201ENST00000361138 YPEL4Q96NS1 127 aa11.23□□□□□ -0.61
SMC5-201ENST00000361138 IGKV3D-20A0A0C4DH25 116 aa11.23□□□□□ -0.61
SMC5-201ENST00000361138 CLEC2AQ6UVW9 174 aa11.23□□□□□ -0.61
SMC5-201ENST00000361138 ETDBQ3ZM63 59 aa11.23□□□□□ -0.61
SMC5-201ENST00000361138 SRSF8Q9BRL6 282 aaKnown RBP11.23□□□□□ -0.61
SMC5-201ENST00000361138 TMEM14CQ9P0S9 112 aa11.23□□□□□ -0.61
SMC5-201ENST00000361138 C9JAW5 83 aa11.22□□□□□ -0.61
SMC5-201ENST00000361138 LYNX1G3V0Z9 82 aa11.22□□□□□ -0.61
SMC5-201ENST00000361138 LYNX1P0DP58 116 aa11.22□□□□□ -0.61
SMC5-201ENST00000361138 ZNF134P52741 427 aa11.22□□□□□ -0.61
SMC5-201ENST00000361138 THAP8Q8NA92 274 aa11.22□□□□□ -0.61
SMC5-201ENST00000361138 TRBV7-9A0A0J9YWB2 115 aa11.22□□□□□ -0.61
SMC5-201ENST00000361138 ZC2HC1AQ96GY0 325 aa11.22□□□□□ -0.61
SMC5-201ENST00000361138 PAX8Q06710 450 aa11.22□□□□□ -0.61
SMC5-201ENST00000361138 C15orf32Q32M92 178 aa11.22□□□□□ -0.61
SMC5-201ENST00000361138 PPDPFLQ8WWR9 84 aa11.22□□□□□ -0.61
SMC5-201ENST00000361138 RNASE6Q93091 150 aaKnown RBP11.22□□□□□ -0.61
SMC5-201ENST00000361138 ZNF747Q9BV97 191 aa11.22□□□□□ -0.61
SMC5-201ENST00000361138 KLF12Q9Y4X4 402 aa11.22□□□□□ -0.61
SMC5-201ENST00000361138 TAL2Q16559 108 aa11.22□□□□□ -0.61
SMC5-201ENST00000361138 NPC2P61916 151 aa11.21□□□□□ -0.61
SMC5-201ENST00000361138 Q6ZR03 302 aa11.21□□□□□ -0.61
SMC5-201ENST00000361138 IGF2BP2-AS1Q96M15 143 aa11.21□□□□□ -0.61
SMC5-201ENST00000361138 FGF23Q9GZV9 251 aaPredicted RBP11.21□□□□□ -0.61
SMC5-201ENST00000361138 RBMY1BA6NDE4 496 aaKnown RBP11.21□□□□□ -0.61
SMC5-201ENST00000361138 RBMY1EA6NEQ0 496 aaKnown RBP11.21□□□□□ -0.61
SMC5-201ENST00000361138 IGHV3-11P01762 117 aa11.21□□□□□ -0.61
SMC5-201ENST00000361138 RBMY1DP0C7P1 496 aaKnown RBP11.21□□□□□ -0.61
SMC5-201ENST00000361138 RBMY1A1P0DJD3 496 aaKnown RBP11.21□□□□□ -0.61
SMC5-201ENST00000361138 RBMY1CP0DJD4 496 aa11.21□□□□□ -0.61
SMC5-201ENST00000361138 UCNP55089 124 aa11.21□□□□□ -0.61
SMC5-201ENST00000361138 C1orf122Q6ZSJ8 110 aa11.21□□□□□ -0.61
SMC5-201ENST00000361138 ZNF474Q6S9Z5 364 aaPredicted RBP11.21□□□□□ -0.62
SMC5-201ENST00000361138 C14orf178Q8N769 122 aaPredicted RBP11.21□□□□□ -0.62
SMC5-201ENST00000361138 CEP290O15078 2479 aa11.21□□□□□ -0.62
SMC5-201ENST00000361138 VCYO14598 125 aa11.21□□□□□ -0.62
SMC5-201ENST00000361138 DEFB104AQ8WTQ1 72 aa11.21□□□□□ -0.62
SMC5-201ENST00000361138 TRBV20-1A0A075B6N2 111 aa11.2□□□□□ -0.62
SMC5-201ENST00000361138 H3BMG7 143 aa11.2□□□□□ -0.62
SMC5-201ENST00000361138 NDUFS7O75251 213 aa11.2□□□□□ -0.62
SMC5-201ENST00000361138 SRSF6Q13247 344 aaKnown RBP11.2□□□□□ -0.62
SMC5-201ENST00000361138 NPYP01303 97 aa11.2□□□□□ -0.62
SMC5-201ENST00000361138 DKK2Q9UBU2 259 aa11.2□□□□□ -0.62
SMC5-201ENST00000361138 ZNF48Q96MX3 618 aaPredicted RBP11.19□□□□□ -0.62
SMC5-201ENST00000361138 TAX1BP3O14907 124 aa11.19□□□□□ -0.62
SMC5-201ENST00000361138 LYPD2Q6UXB3 125 aa11.19□□□□□ -0.62
SMC5-201ENST00000361138 TICRRQ7Z2Z1 1910 aa11.19□□□□□ -0.62
SMC5-201ENST00000361138 SAP30O75446 220 aa11.19□□□□□ -0.62
SMC5-201ENST00000361138 H3BRN7 92 aa11.19□□□□□ -0.62
SMC5-201ENST00000361138 C5orf64Q2M2E5 130 aa11.19□□□□□ -0.62
SMC5-201ENST00000361138 LINC00477Q96M19 166 aa11.19□□□□□ -0.62
SMC5-201ENST00000361138 VGLL1Q99990 258 aa11.19□□□□□ -0.62
SMC5-201ENST00000361138 WT1-ASQ06250 92 aa11.18□□□□□ -0.62
SMC5-201ENST00000361138 OR11H6Q8NGC7 330 aa11.18□□□□□ -0.62
SMC5-201ENST00000361138 KLRD1Q13241 179 aa11.18□□□□□ -0.62
SMC5-201ENST00000361138 LINC00173Q6ZV60 143 aa11.18□□□□□ -0.62
SMC5-201ENST00000361138 SPANXA1Q9NS26 97 aa11.18□□□□□ -0.62
SMC5-201ENST00000361138 TRGV11A0A075B6L2 103 aa11.18□□□□□ -0.62
SMC5-201ENST00000361138 WFDC12Q8WWY7 111 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms