RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 GAGE5Q13069 117 aa12.06□□□□□ -0.48
LMX1B-201ENST00000355497 UNC13CQ8NB66 2214 aa12.06□□□□□ -0.48
LMX1B-201ENST00000355497 IGKV1D-17A0A075B6S4 117 aa12.05□□□□□ -0.48
LMX1B-201ENST00000355497 PRSS46E5RG02 174 aa12.05□□□□□ -0.48
LMX1B-201ENST00000355497 NDUFS5O43920 106 aa12.05□□□□□ -0.48
LMX1B-201ENST00000355497 MESP1Q9BRJ9 268 aa12.05□□□□□ -0.48
LMX1B-201ENST00000355497 A0A0G2JNJ9 132 aa12.05□□□□□ -0.48
LMX1B-201ENST00000355497 TMEM213A2RRL7 107 aa12.05□□□□□ -0.48
LMX1B-201ENST00000355497 C5orf24Q7Z6I8 188 aa12.05□□□□□ -0.48
LMX1B-201ENST00000355497 C8orf49Q96NF6 230 aa12.05□□□□□ -0.48
LMX1B-201ENST00000355497 Q9UFV3 132 aa12.05□□□□□ -0.48
LMX1B-201ENST00000355497 TMEM258P61165 79 aa12.05□□□□□ -0.48
LMX1B-201ENST00000355497 SLC25A16P16260 332 aa12.04□□□□□ -0.48
LMX1B-201ENST00000355497 Q6ZS49 121 aa12.04□□□□□ -0.48
LMX1B-201ENST00000355497 POLR3KQ9Y2Y1 108 aaPredicted RBP12.04□□□□□ -0.48
LMX1B-201ENST00000355497 THSD7AQ9UPZ6 1657 aa12.04□□□□□ -0.48
LMX1B-201ENST00000355497 COL4A5P29400 1685 aa12.04□□□□□ -0.48
LMX1B-201ENST00000355497 NDUFS6O75380 124 aaKnown RBP12.04□□□□□ -0.48
LMX1B-201ENST00000355497 PFN2P35080 140 aa12.04□□□□□ -0.48
LMX1B-201ENST00000355497 DSCR8Q96T75 97 aa12.04□□□□□ -0.48
LMX1B-201ENST00000355497 CRLF1O75462 422 aa12.04□□□□□ -0.48
LMX1B-201ENST00000355497 PFN1P07737 140 aaKnown RBP12.04□□□□□ -0.48
LMX1B-201ENST00000355497 GNLYP22749 145 aa12.04□□□□□ -0.48
LMX1B-201ENST00000355497 PTPRZ1P23471 2315 aaPredicted RBP12.04□□□□□ -0.48
LMX1B-201ENST00000355497 UBR3Q6ZT12 1888 aa12.04□□□□□ -0.48
LMX1B-201ENST00000355497 KNCNA6PVL3 124 aa12.04□□□□□ -0.48
LMX1B-201ENST00000355497 C2orf66Q6UXQ4 117 aa12.04□□□□□ -0.48
LMX1B-201ENST00000355497 EREGO14944 169 aa12.03□□□□□ -0.48
LMX1B-201ENST00000355497 LYPD2Q6UXB3 125 aa12.03□□□□□ -0.48
LMX1B-201ENST00000355497 CD59P13987 128 aa12.03□□□□□ -0.48
LMX1B-201ENST00000355497 QRFPP83859 136 aa12.03□□□□□ -0.48
LMX1B-201ENST00000355497 THAP8Q8NA92 274 aa12.03□□□□□ -0.48
LMX1B-201ENST00000355497 LINC00479Q96M42 142 aa12.03□□□□□ -0.48
LMX1B-201ENST00000355497 COL8A2P25067 703 aa12.03□□□□□ -0.48
LMX1B-201ENST00000355497 CFHR2P36980 270 aa12.03□□□□□ -0.48
LMX1B-201ENST00000355497 DAD1P61803 113 aa12.03□□□□□ -0.48
LMX1B-201ENST00000355497 C5orf47Q569G3 176 aa12.03□□□□□ -0.48
LMX1B-201ENST00000355497 PPDPFLQ8WWR9 84 aa12.03□□□□□ -0.48
LMX1B-201ENST00000355497 SAA4P35542 130 aa12.03□□□□□ -0.48
LMX1B-201ENST00000355497 LINC00205P59089 165 aa12.03□□□□□ -0.48
LMX1B-201ENST00000355497 CFHR3Q02985 330 aa12.03□□□□□ -0.48
LMX1B-201ENST00000355497 MLANAQ16655 118 aa12.03□□□□□ -0.48
LMX1B-201ENST00000355497 A0A0G2JRQ6 117 aa12.02□□□□□ -0.48
LMX1B-201ENST00000355497 C9orf118A6NHY6 69 aa12.02□□□□□ -0.48
LMX1B-201ENST00000355497 F5H768 121 aa12.02□□□□□ -0.48
LMX1B-201ENST00000355497 TDRD6O60522 2096 aaKnown RBP12.02□□□□□ -0.49
LMX1B-201ENST00000355497 HS3ST6Q96QI5 342 aa12.02□□□□□ -0.49
LMX1B-201ENST00000355497 PATJQ8NI35 1801 aa12.02□□□□□ -0.49
LMX1B-201ENST00000355497 C5orf63A6NC05 138 aa12.02□□□□□ -0.49
LMX1B-201ENST00000355497 FAM104BQ5XKR9 115 aa12.02□□□□□ -0.49
LMX1B-201ENST00000355497 FAM110DQ8TAY7 271 aaPredicted RBP12.02□□□□□ -0.49
LMX1B-201ENST00000355497 IGHV3-16A0A0C4DH30 117 aa12.02□□□□□ -0.49
LMX1B-201ENST00000355497 TSSC4Q9Y5U2 329 aaPredicted RBP12.02□□□□□ -0.49
LMX1B-201ENST00000355497 LINC01619G3V211 115 aa12.01□□□□□ -0.49
LMX1B-201ENST00000355497 NDUFB8O95169 186 aa12.01□□□□□ -0.49
LMX1B-201ENST00000355497 XCL2Q9UBD3 114 aa12.01□□□□□ -0.49
LMX1B-201ENST00000355497 KLK9Q9UKQ9 250 aa12.01□□□□□ -0.49
LMX1B-201ENST00000355497 TNS1Q9HBL0 1735 aaKnown RBP12.01□□□□□ -0.49
LMX1B-201ENST00000355497 hADV29S1A0JD25 119 aa12.01□□□□□ -0.49
LMX1B-201ENST00000355497 CLPSL1A2RUU4 121 aa12.01□□□□□ -0.49
LMX1B-201ENST00000355497 CLPSP04118 112 aa12.01□□□□□ -0.49
LMX1B-201ENST00000355497 AZU1P20160 251 aa12.01□□□□□ -0.49
LMX1B-201ENST00000355497 OR11H6Q8NGC7 330 aa12.01□□□□□ -0.49
LMX1B-201ENST00000355497 C18orf32Q8TCD1 76 aa12.01□□□□□ -0.49
LMX1B-201ENST00000355497 SCRT2Q9NQ03 307 aa12.01□□□□□ -0.49
LMX1B-201ENST00000355497 TRAV12-1A0A0B4J245 112 aa12.01□□□□□ -0.49
LMX1B-201ENST00000355497 Q0VFX4 171 aa12.01□□□□□ -0.49
LMX1B-201ENST00000355497 C20orf144Q9BQM9 153 aa12.01□□□□□ -0.49
LMX1B-201ENST00000355497 COL5A3P25940 1745 aaPredicted RBP12.01□□□□□ -0.49
LMX1B-201ENST00000355497 PARP14Q460N5 1801 aa12.01□□□□□ -0.49
LMX1B-201ENST00000355497 SLAQ13239 276 aa12□□□□□ -0.49
LMX1B-201ENST00000355497 MORN5Q5VZ52 161 aa12□□□□□ -0.49
LMX1B-201ENST00000355497 A0A1W2PPI3 338 aa12□□□□□ -0.49
LMX1B-201ENST00000355497 IGKV1-16P04430 117 aa12□□□□□ -0.49
LMX1B-201ENST00000355497 COL11A2P13942 1736 aaPredicted RBP12□□□□□ -0.49
LMX1B-201ENST00000355497 LHBP01229 141 aa12□□□□□ -0.49
LMX1B-201ENST00000355497 F8W1H4 67 aa12□□□□□ -0.49
LMX1B-201ENST00000355497 CGB3P0DN86 165 aa12□□□□□ -0.49
LMX1B-201ENST00000355497 SPINK13Q1W4C9 94 aa12□□□□□ -0.49
LMX1B-201ENST00000355497 RNF144BQ7Z419 303 aa12□□□□□ -0.49
LMX1B-201ENST00000355497 ZNF581Q9P0T4 197 aa12□□□□□ -0.49
LMX1B-201ENST00000355497 RP1L1Q8IWN7 2480 aaPredicted RBP12□□□□□ -0.49
LMX1B-201ENST00000355497 MBD3L4A6NDZ8 208 aaPredicted RBP11.99□□□□□ -0.49
LMX1B-201ENST00000355497 MBD3L3A6NE82 208 aaPredicted RBP11.99□□□□□ -0.49
LMX1B-201ENST00000355497 MBD3L5A6NJ08 208 aaPredicted RBP11.99□□□□□ -0.49
LMX1B-201ENST00000355497 A8MWP6 167 aa11.99□□□□□ -0.49
LMX1B-201ENST00000355497 IGHG4P01861 327 aa11.99□□□□□ -0.49
LMX1B-201ENST00000355497 ADCYAP1P18509 176 aa11.99□□□□□ -0.49
LMX1B-201ENST00000355497 MBD3L2Q8NHZ7 208 aaPredicted RBP11.99□□□□□ -0.49
LMX1B-201ENST00000355497 COL4A1P02462 1669 aa11.99□□□□□ -0.49
LMX1B-201ENST00000355497 SCN2AQ99250 2005 aa11.99□□□□□ -0.49
LMX1B-201ENST00000355497 TMEM243Q9BU79 118 aa11.99□□□□□ -0.49
LMX1B-201ENST00000355497 YPEL3P61236 119 aaPredicted RBP11.99□□□□□ -0.49
LMX1B-201ENST00000355497 ATP6V0E1O15342 81 aa11.99□□□□□ -0.49
LMX1B-201ENST00000355497 RBM3P98179 157 aaKnown RBP11.99□□□□□ -0.49
LMX1B-201ENST00000355497 MDS2Q8NDY4 140 aa11.99□□□□□ -0.49
LMX1B-201ENST00000355497 BPESC1Q9GZL8 116 aa11.99□□□□□ -0.49
LMX1B-201ENST00000355497 FGF6P10767 208 aa11.99□□□□□ -0.49
LMX1B-201ENST00000355497 KLF5Q13887 457 aaPredicted RBP11.99□□□□□ -0.49
LMX1B-201ENST00000355497 TAL2Q16559 108 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms