RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 RELQ04864 619 aaPredicted RBP8.67□□□□□ -1.02
SVIP-201ENST00000354193 TEX38Q6PEX7 206 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 TTC9CQ8N5M4 171 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 FXYD5Q96DB9 178 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 ZNF586Q9NXT0 402 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 GATA3P23771 443 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 S100A7P31151 101 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 ADMP35318 185 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 TCF24Q7RTU0 167 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 PGLYRP4Q96LB8 373 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 GAR1Q9NY12 217 aaKnown RBP8.67□□□□□ -1.02
SVIP-201ENST00000354193 FBN2P35556 2912 aa8.67□□□□□ -1.02
SVIP-201ENST00000354193 PSMB11A5LHX3 300 aa8.66□□□□□ -1.02
SVIP-201ENST00000354193 M0QZK8 103 aa8.66□□□□□ -1.02
SVIP-201ENST00000354193 TOMM40O96008 361 aa8.66□□□□□ -1.02
SVIP-201ENST00000354193 NTF3P20783 257 aa8.66□□□□□ -1.02
SVIP-201ENST00000354193 DEFB1P60022 68 aa8.66□□□□□ -1.02
SVIP-201ENST00000354193 OR4B1Q8NGF8 309 aa8.66□□□□□ -1.02
SVIP-201ENST00000354193 NDFIP1Q9BT67 221 aa8.66□□□□□ -1.02
SVIP-201ENST00000354193 CUBNO60494 3623 aa8.66□□□□□ -1.02
SVIP-201ENST00000354193 GRAMD2BQ96HH9 432 aa8.66□□□□□ -1.02
SVIP-201ENST00000354193 PPIFP30405 207 aaKnown RBP8.66□□□□□ -1.02
SVIP-201ENST00000354193 FAM106AQ4KMX7 169 aa8.66□□□□□ -1.02
SVIP-201ENST00000354193 TM4SF20Q53R12 229 aa8.66□□□□□ -1.02
SVIP-201ENST00000354193 SAMD10Q9BYL1 202 aa8.66□□□□□ -1.02
SVIP-201ENST00000354193 SYNJ2BPP57105 145 aa8.66□□□□□ -1.02
SVIP-201ENST00000354193 SHANK2-AS3Q9BTD1 123 aa8.66□□□□□ -1.02
SVIP-201ENST00000354193 A0A0G2JLM5 398 aa8.65□□□□□ -1.02
SVIP-201ENST00000354193 RPLP1P05386 114 aaKnown RBP8.65□□□□□ -1.02
SVIP-201ENST00000354193 CSN3P07498 182 aa8.65□□□□□ -1.02
SVIP-201ENST00000354193 FABP4P15090 132 aa8.65□□□□□ -1.02
SVIP-201ENST00000354193 C10orf91Q5T1B1 145 aa8.65□□□□□ -1.02
SVIP-201ENST00000354193 M0QZ24 198 aa8.65□□□□□ -1.02
SVIP-201ENST00000354193 CHEK1O14757 476 aa8.65□□□□□ -1.02
SVIP-201ENST00000354193 TRGC1P0CF51 173 aa8.65□□□□□ -1.02
SVIP-201ENST00000354193 BORCS7Q96B45 105 aa8.65□□□□□ -1.02
SVIP-201ENST00000354193 XKRY2A2RUG3 117 aa8.65□□□□□ -1.03
SVIP-201ENST00000354193 APOHP02749 345 aaPredicted RBP8.65□□□□□ -1.03
SVIP-201ENST00000354193 TCRAP04437 139 aa8.65□□□□□ -1.03
SVIP-201ENST00000354193 UBR5O95071 2799 aaPredicted RBP8.65□□□□□ -1.03
SVIP-201ENST00000354193 VWC2LB2RUY7 222 aa8.64□□□□□ -1.03
SVIP-201ENST00000354193 H0Y8G0 127 aa8.64□□□□□ -1.03
SVIP-201ENST00000354193 CRYGCP07315 174 aa8.64□□□□□ -1.03
SVIP-201ENST00000354193 HIST1H1AQ02539 215 aaPredicted RBP8.64□□□□□ -1.03
SVIP-201ENST00000354193 ATG101Q9BSB4 218 aa8.64□□□□□ -1.03
SVIP-201ENST00000354193 RAB9AP51151 201 aa8.64□□□□□ -1.03
SVIP-201ENST00000354193 ERCC8Q13216 396 aa8.64□□□□□ -1.03
SVIP-201ENST00000354193 GPR82Q96P67 336 aa8.64□□□□□ -1.03
SVIP-201ENST00000354193 SSBP4Q9BWG4 385 aaPredicted RBP8.64□□□□□ -1.03
SVIP-201ENST00000354193 TENM4Q6N022 2769 aa8.64□□□□□ -1.03
SVIP-201ENST00000354193 EGR2P11161 476 aaPredicted RBP8.64□□□□□ -1.03
SVIP-201ENST00000354193 SRSF8Q9BRL6 282 aaKnown RBP8.64□□□□□ -1.03
SVIP-201ENST00000354193 RNF24Q9Y225 148 aa8.64□□□□□ -1.03
SVIP-201ENST00000354193 GCGP01275 180 aa8.63□□□□□ -1.03
SVIP-201ENST00000354193 S100A4P26447 101 aaKnown RBP8.63□□□□□ -1.03
SVIP-201ENST00000354193 UNQ9165/PRO28630Q6UXU0 137 aa8.63□□□□□ -1.03
SVIP-201ENST00000354193 Q8N6K4 173 aa8.63□□□□□ -1.03
SVIP-201ENST00000354193 OR10D4PQ8NGN7 298 aa8.63□□□□□ -1.03
SVIP-201ENST00000354193 GPR61Q9BZJ8 451 aa8.63□□□□□ -1.03
SVIP-201ENST00000354193 MXRA5Q9NR99 2828 aa8.63□□□□□ -1.03
SVIP-201ENST00000354193 FOXA3P55318 350 aaPredicted RBP8.63□□□□□ -1.03
SVIP-201ENST00000354193 NEU1Q99519 415 aa8.63□□□□□ -1.03
SVIP-201ENST00000354193 K7EN84 100 aa8.63□□□□□ -1.03
SVIP-201ENST00000354193 LOXL1Q08397 574 aaPredicted RBP8.63□□□□□ -1.03
SVIP-201ENST00000354193 TMEM78Q5T7P6 136 aa8.63□□□□□ -1.03
SVIP-201ENST00000354193 VPREB3Q9UKI3 123 aa8.63□□□□□ -1.03
SVIP-201ENST00000354193 PSG8Q9UQ74 426 aa8.63□□□□□ -1.03
SVIP-201ENST00000354193 ZNF688P0C7X2 276 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 GFI1BQ5VTD9 330 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 PIFOQ8TCI5 191 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 BTF3L4Q96K17 158 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 OTORQ9NRC9 128 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 MAST4O15021 2626 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 YPEL3P61236 119 aaPredicted RBP8.62□□□□□ -1.03
SVIP-201ENST00000354193 EBI3Q14213 229 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 ZNF502Q8TBZ5 544 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 RHPN1-AS1Q9BWJ2 59 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 TRBV7-1A0A0A6YYK4 115 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 HIGD1CA8MV81 97 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 INS-IGF2F8WCM5 200 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 NUDT10Q8NFP7 164 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 DYNLRB2Q8TF09 96 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 NUDT11Q96G61 164 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 CCDC140Q96MF4 163 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 ARL2-SNX15V9GYD0 113 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 TRBV19A0A075B6N1 114 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 A0A1B0GUS0 222 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 A6NDX4 124 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 PMCHP20382 165 aa8.62□□□□□ -1.03
SVIP-201ENST00000354193 SIGLEC15Q6ZMC9 328 aa8.61□□□□□ -1.03
SVIP-201ENST00000354193 A0A087WWC5 75 aa8.61□□□□□ -1.03
SVIP-201ENST00000354193 FRMD6-AS1P0C7T7 363 aa8.61□□□□□ -1.03
SVIP-201ENST00000354193 GP9P14770 177 aa8.61□□□□□ -1.03
SVIP-201ENST00000354193 KLHL30-AS1Q8NEE0 82 aa8.61□□□□□ -1.03
SVIP-201ENST00000354193 F6UB75 175 aa8.61□□□□□ -1.03
SVIP-201ENST00000354193 H3BRN7 92 aa8.61□□□□□ -1.03
SVIP-201ENST00000354193 TMEM75Q8N9X5 138 aa8.61□□□□□ -1.03
SVIP-201ENST00000354193 VN1R17PQ8TDU5 208 aa8.61□□□□□ -1.03
SVIP-201ENST00000354193 ZNF418Q8TF45 676 aaPredicted RBP8.61□□□□□ -1.03
SVIP-201ENST00000354193 PEF1Q9UBV8 284 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms