RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 DIRC3C9JPN6 131 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 CLEC3BP05452 202 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 GATA3P23771 443 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 RAB9AP51151 201 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 RAB4BP61018 213 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 JOSD1Q15040 202 aaPredicted RBP12.99□□□□□ -0.33
SAMM50-201ENST00000350028 C19orf54Q5BKX5 351 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 LINC00322Q6ZN03 302 aaPredicted RBP12.99□□□□□ -0.33
SAMM50-201ENST00000350028 TMEM256Q8N2U0 113 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 OR4B1Q8NGF8 309 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 NEU1Q99519 415 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 AKAP6Q13023 2319 aa12.98□□□□□ -0.33
SAMM50-201ENST00000350028 TRAV8-1A0A0A6YYK1 113 aa12.98□□□□□ -0.33
SAMM50-201ENST00000350028 CSN1S1P47710 185 aa12.98□□□□□ -0.33
SAMM50-201ENST00000350028 PSG3Q16557 428 aa12.98□□□□□ -0.33
SAMM50-201ENST00000350028 TOMM20LQ6UXN7 152 aa12.98□□□□□ -0.33
SAMM50-201ENST00000350028 ATP5L2Q7Z4Y8 100 aa12.98□□□□□ -0.33
SAMM50-201ENST00000350028 GFRA4Q9GZZ7 299 aa12.98□□□□□ -0.33
SAMM50-201ENST00000350028 PSG8Q9UQ74 426 aa12.98□□□□□ -0.33
SAMM50-201ENST00000350028 ABCA2Q9BZC7 2435 aa12.98□□□□□ -0.33
SAMM50-201ENST00000350028 GRIFINA4D1Z8 144 aa12.97□□□□□ -0.33
SAMM50-201ENST00000350028 A6NDX4 124 aa12.97□□□□□ -0.33
SAMM50-201ENST00000350028 NPIPB6E9PJ23 425 aa12.97□□□□□ -0.33
SAMM50-201ENST00000350028 ZNF253O75346 499 aa12.97□□□□□ -0.33
SAMM50-201ENST00000350028 ESDP10768 282 aa12.97□□□□□ -0.33
SAMM50-201ENST00000350028 ATP5G2Q06055 141 aa12.97□□□□□ -0.33
SAMM50-201ENST00000350028 ZFAND3Q9H8U3 227 aa12.97□□□□□ -0.33
SAMM50-201ENST00000350028 DOPEY2Q9Y3R5 2298 aa12.97□□□□□ -0.33
SAMM50-201ENST00000350028 FAM231BA6NCW3 169 aa12.96□□□□□ -0.33
SAMM50-201ENST00000350028 FAM223BA6NKX1 122 aa12.96□□□□□ -0.33
SAMM50-201ENST00000350028 HIGD1CA8MV81 97 aa12.96□□□□□ -0.33
SAMM50-201ENST00000350028 APCSP02743 223 aa12.96□□□□□ -0.33
SAMM50-201ENST00000350028 CLEC19AQ6UXS0 136 aa12.96□□□□□ -0.33
SAMM50-201ENST00000350028 FAM223AQ8IWN6 122 aa12.96□□□□□ -0.33
SAMM50-201ENST00000350028 CIARTQ8N365 385 aaPredicted RBP12.96□□□□□ -0.33
SAMM50-201ENST00000350028 OR5R1Q8NH85 324 aa12.96□□□□□ -0.33
SAMM50-201ENST00000350028 CCDC140Q96MF4 163 aa12.96□□□□□ -0.33
SAMM50-201ENST00000350028 MS4A10Q96PG2 267 aa12.96□□□□□ -0.33
SAMM50-201ENST00000350028 HIF1ANQ9NWT6 349 aa12.96□□□□□ -0.33
SAMM50-201ENST00000350028 SOX21Q9Y651 276 aaPredicted RBP12.96□□□□□ -0.33
SAMM50-201ENST00000350028 CSMD2Q7Z408 3487 aa12.96□□□□□ -0.34
SAMM50-201ENST00000350028 M0QZK8 103 aa12.96□□□□□ -0.34
SAMM50-201ENST00000350028 TP53TG3Q9ULZ0 132 aa12.96□□□□□ -0.34
SAMM50-201ENST00000350028 FASNP49327 2511 aaKnown RBP12.95□□□□□ -0.34
SAMM50-201ENST00000350028 A0A1B0GUS0 222 aa12.95□□□□□ -0.34
SAMM50-201ENST00000350028 FBLL1A6NHQ2 334 aaKnown RBP12.95□□□□□ -0.34
SAMM50-201ENST00000350028 NUPR1O60356 82 aa12.95□□□□□ -0.34
SAMM50-201ENST00000350028 IGF1P05019 195 aa12.95□□□□□ -0.34
SAMM50-201ENST00000350028 COL8A1P27658 744 aa12.95□□□□□ -0.34
SAMM50-201ENST00000350028 PAFAH1B2P68402 229 aa12.95□□□□□ -0.34
SAMM50-201ENST00000350028 RELQ04864 619 aaPredicted RBP12.95□□□□□ -0.34
SAMM50-201ENST00000350028 OR10J3Q5JRS4 329 aa12.95□□□□□ -0.34
SAMM50-201ENST00000350028 C16orf54Q6UWD8 224 aa12.95□□□□□ -0.34
SAMM50-201ENST00000350028 BAGE3Q86Y29 109 aa12.95□□□□□ -0.34
SAMM50-201ENST00000350028 NRGNQ92686 78 aa12.95□□□□□ -0.34
SAMM50-201ENST00000350028 GNB4Q9HAV0 340 aa12.95□□□□□ -0.34
SAMM50-201ENST00000350028 SMAD5-AS1Q9Y6J3 95 aa12.95□□□□□ -0.34
SAMM50-201ENST00000350028 H3BUX3 64 aa12.94□□□□□ -0.34
SAMM50-201ENST00000350028 M0R3E3 92 aa12.94□□□□□ -0.34
SAMM50-201ENST00000350028 BRI3O95415 125 aa12.94□□□□□ -0.34
SAMM50-201ENST00000350028 C9orf152Q5JTZ5 239 aa12.94□□□□□ -0.34
SAMM50-201ENST00000350028 TCF24Q7RTU0 167 aa12.94□□□□□ -0.34
SAMM50-201ENST00000350028 A0A087X0K7 114 aa12.93□□□□□ -0.34
SAMM50-201ENST00000350028 IGHV3-35A0A0C4DH35 117 aa12.93□□□□□ -0.34
SAMM50-201ENST00000350028 A0A1B0GXF2 115 aa12.93□□□□□ -0.34
SAMM50-201ENST00000350028 IGHG2P01859 326 aa12.93□□□□□ -0.34
SAMM50-201ENST00000350028 TPPP2P59282 170 aa12.93□□□□□ -0.34
SAMM50-201ENST00000350028 LY6EQ16553 131 aa12.93□□□□□ -0.34
SAMM50-201ENST00000350028 KIAA1644Q3SXP7 199 aa12.93□□□□□ -0.34
SAMM50-201ENST00000350028 CDPF1Q6NVV7 123 aa12.93□□□□□ -0.34
SAMM50-201ENST00000350028 LINC01356Q8N9X3 169 aa12.93□□□□□ -0.34
SAMM50-201ENST00000350028 H3BUA1 57 aa12.93□□□□□ -0.34
SAMM50-201ENST00000350028 BUB3O43684 328 aa12.93□□□□□ -0.34
SAMM50-201ENST00000350028 GZMBP10144 247 aa12.93□□□□□ -0.34
SAMM50-201ENST00000350028 C1orf194Q5T5A4 169 aa12.93□□□□□ -0.34
SAMM50-201ENST00000350028 RBPMS2Q6ZRY4 209 aaKnown RBP12.93□□□□□ -0.34
SAMM50-201ENST00000350028 OR2D3Q8NGH3 330 aa12.93□□□□□ -0.34
SAMM50-201ENST00000350028 ZC2HC1AQ96GY0 325 aa12.93□□□□□ -0.34
SAMM50-201ENST00000350028 SERF1AO75920 110 aa12.92□□□□□ -0.34
SAMM50-201ENST00000350028 TRGV3P03979 118 aa12.92□□□□□ -0.34
SAMM50-201ENST00000350028 LINC00310P59036 64 aa12.92□□□□□ -0.34
SAMM50-201ENST00000350028 GTSF1Q8WW33 167 aa12.92□□□□□ -0.34
SAMM50-201ENST00000350028 NOL4LQ96MY1 436 aaPredicted RBP12.92□□□□□ -0.34
SAMM50-201ENST00000350028 ASH1LQ9NR48 2969 aaKnown RBP12.92□□□□□ -0.34
SAMM50-201ENST00000350028 ZNF785A8K8V0 405 aa12.91□□□□□ -0.34
SAMM50-201ENST00000350028 AVPP01185 164 aa12.91□□□□□ -0.34
SAMM50-201ENST00000350028 SRIP30626 198 aa12.91□□□□□ -0.34
SAMM50-201ENST00000350028 HBBP68871 147 aa12.91□□□□□ -0.34
SAMM50-201ENST00000350028 GDF5OSQ5U4N7 250 aa12.91□□□□□ -0.34
SAMM50-201ENST00000350028 IGHV3OR16-8A0A075B7F1 116 aa12.91□□□□□ -0.34
SAMM50-201ENST00000350028 A0A096LNT2 108 aa12.91□□□□□ -0.34
SAMM50-201ENST00000350028 CLPSL1A2RUU4 121 aa12.91□□□□□ -0.34
SAMM50-201ENST00000350028 J3QLI3 93 aa12.91□□□□□ -0.34
SAMM50-201ENST00000350028 FOXA3P55318 350 aaPredicted RBP12.91□□□□□ -0.34
SAMM50-201ENST00000350028 SLAQ13239 276 aa12.91□□□□□ -0.34
SAMM50-201ENST00000350028 SAPCD1Q5SSQ6 148 aa12.91□□□□□ -0.34
SAMM50-201ENST00000350028 COX8CQ7Z4L0 72 aa12.91□□□□□ -0.34
SAMM50-201ENST00000350028 PGLYRP4Q96LB8 373 aa12.91□□□□□ -0.34
SAMM50-201ENST00000350028 PSMG3-AS1Q96PY0 264 aa12.91□□□□□ -0.34
SAMM50-201ENST00000350028 METTL26Q96S19 204 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms