RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 NDFIP1Q9BT67 221 aa11.45□□□□□ -0.58
TDP2-201ENST00000341060 PDE6HQ13956 83 aa11.44□□□□□ -0.58
TDP2-201ENST00000341060 LCN12Q6JVE5 192 aa11.44□□□□□ -0.58
TDP2-201ENST00000341060 ZNF562Q6V9R5 426 aa11.44□□□□□ -0.58
TDP2-201ENST00000341060 S100A7AQ86SG5 101 aa11.44□□□□□ -0.58
TDP2-201ENST00000341060 WNK2Q9Y3S1 2297 aa11.44□□□□□ -0.58
TDP2-201ENST00000341060 FCGR2BP31994 310 aaPredicted RBP11.44□□□□□ -0.58
TDP2-201ENST00000341060 FAM120AOSQ5T036 256 aa11.44□□□□□ -0.58
TDP2-201ENST00000341060 CCDC144NLQ6NUI1 221 aa11.44□□□□□ -0.58
TDP2-201ENST00000341060 C1orf122Q6ZSJ8 110 aa11.44□□□□□ -0.58
TDP2-201ENST00000341060 ATOH7Q8N100 152 aa11.44□□□□□ -0.58
TDP2-201ENST00000341060 ARPC1AQ92747 370 aa11.44□□□□□ -0.58
TDP2-201ENST00000341060 PSG8Q9UQ74 426 aa11.44□□□□□ -0.58
TDP2-201ENST00000341060 S4R3C0 116 aa11.44□□□□□ -0.58
TDP2-201ENST00000341060 F8W735 103 aaPredicted RBP11.43□□□□□ -0.58
TDP2-201ENST00000341060 MFAP4P55083 255 aa11.43□□□□□ -0.58
TDP2-201ENST00000341060 TTC9CQ8N5M4 171 aa11.43□□□□□ -0.58
TDP2-201ENST00000341060 A0A1W2PRD5 423 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 A0A1W2PRF3 423 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 A0A1W2PRM7 423 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 SH2D7A6NKC9 451 aaPredicted RBP11.42□□□□□ -0.58
TDP2-201ENST00000341060 CRXO43186 299 aaPredicted RBP11.42□□□□□ -0.58
TDP2-201ENST00000341060 NDPQ00604 133 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 Q56UQ5 140 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 DMRTA1Q5VZB9 504 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 Q8N6K4 173 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 TXN2Q99757 166 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 TMEM70Q9BUB7 260 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 COL12A1Q99715 3063 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 TRAV9-2A0A087WT02 112 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 IGHV1-24A0A0C4DH33 117 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 A0A1B0GUT8 65 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 C20orf202A1L168 122 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 OOSP1A8MZH6 123 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 M0QZ24 198 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 MAJINQ3KP22 176 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 VMO1Q7Z5L0 202 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 BCL6BQ8N143 479 aaPredicted RBP11.42□□□□□ -0.58
TDP2-201ENST00000341060 DYNAPQ8N1N2 210 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 KIR3DL3Q8N743 410 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 LPAR2Q9HBW0 351 aa11.42□□□□□ -0.58
TDP2-201ENST00000341060 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.41□□□□□ -0.58
TDP2-201ENST00000341060 M0R3E3 92 aa11.41□□□□□ -0.58
TDP2-201ENST00000341060 LINC00614P0C842 121 aa11.41□□□□□ -0.58
TDP2-201ENST00000341060 ZNF25P17030 456 aaPredicted RBP11.41□□□□□ -0.58
TDP2-201ENST00000341060 G0S2P27469 103 aa11.41□□□□□ -0.58
TDP2-201ENST00000341060 EBI3Q14213 229 aa11.41□□□□□ -0.58
TDP2-201ENST00000341060 BATFQ16520 125 aa11.41□□□□□ -0.58
TDP2-201ENST00000341060 Q6ZN92 141 aa11.41□□□□□ -0.58
TDP2-201ENST00000341060 AAMDCQ9H7C9 122 aa11.41□□□□□ -0.58
TDP2-201ENST00000341060 CLEC5AQ9NY25 188 aa11.41□□□□□ -0.58
TDP2-201ENST00000341060 NCBP2LA6PVI3 153 aaKnown RBP11.41□□□□□ -0.58
TDP2-201ENST00000341060 HNRNPA3P51991 378 aaKnown RBP11.41□□□□□ -0.58
TDP2-201ENST00000341060 Q6AWC8 147 aa11.41□□□□□ -0.58
TDP2-201ENST00000341060 DTX2Q86UW9 622 aa11.41□□□□□ -0.58
TDP2-201ENST00000341060 GATD1Q8NB37 220 aa11.41□□□□□ -0.58
TDP2-201ENST00000341060 C21orf62Q9NYP8 219 aa11.41□□□□□ -0.58
TDP2-201ENST00000341060 C1RLQ9NZP8 487 aa11.41□□□□□ -0.58
TDP2-201ENST00000341060 THYN1Q9P016 225 aa11.41□□□□□ -0.58
TDP2-201ENST00000341060 A0A1B0GW15 77 aa11.4□□□□□ -0.58
TDP2-201ENST00000341060 ARMS2P0C7Q2 107 aa11.4□□□□□ -0.58
TDP2-201ENST00000341060 CRIP1P50238 77 aa11.4□□□□□ -0.58
TDP2-201ENST00000341060 COL5A1-AS1Q5SY13 56 aa11.4□□□□□ -0.58
TDP2-201ENST00000341060 MINOS1Q5TGZ0 78 aa11.4□□□□□ -0.58
TDP2-201ENST00000341060 SPATA12Q7Z6I5 190 aa11.4□□□□□ -0.58
TDP2-201ENST00000341060 MINOS1-NBL1R4GNA1 71 aa11.4□□□□□ -0.58
TDP2-201ENST00000341060 SERTM2A0A1B0GWG4 89 aa11.39□□□□□ -0.59
TDP2-201ENST00000341060 RIGQ13278 110 aa11.39□□□□□ -0.59
TDP2-201ENST00000341060 CYB5R2Q6BCY4 276 aa11.39□□□□□ -0.59
TDP2-201ENST00000341060 ASCL2Q99929 193 aa11.39□□□□□ -0.59
TDP2-201ENST00000341060 LEPROTL1O95214 131 aa11.39□□□□□ -0.59
TDP2-201ENST00000341060 CT45A10P0DMU9 189 aa11.39□□□□□ -0.59
TDP2-201ENST00000341060 TMEM208Q9BTX3 173 aa11.39□□□□□ -0.59
TDP2-201ENST00000341060 LAMTOR2Q9Y2Q5 125 aa11.39□□□□□ -0.59
TDP2-201ENST00000341060 TSPOP30536 169 aa11.38□□□□□ -0.59
TDP2-201ENST00000341060 PSG9Q00887 426 aa11.38□□□□□ -0.59
TDP2-201ENST00000341060 C8orf49Q96NF6 230 aa11.38□□□□□ -0.59
TDP2-201ENST00000341060 SYS1-DBNDD2H3BUS1 97 aa11.38□□□□□ -0.59
TDP2-201ENST00000341060 DLEU1O43261 78 aa11.38□□□□□ -0.59
TDP2-201ENST00000341060 SCGB2A1O75556 95 aa11.38□□□□□ -0.59
TDP2-201ENST00000341060 NDUFB8O95169 186 aa11.38□□□□□ -0.59
TDP2-201ENST00000341060 OR5AL1P0C617 328 aa11.38□□□□□ -0.59
TDP2-201ENST00000341060 PRB4P10163 310 aaPredicted RBP11.38□□□□□ -0.59
TDP2-201ENST00000341060 IGLL1P15814 213 aa11.38□□□□□ -0.59
TDP2-201ENST00000341060 TMEM11P17152 192 aa11.38□□□□□ -0.59
TDP2-201ENST00000341060 RPL7P18124 248 aaKnown RBP11.38□□□□□ -0.59
TDP2-201ENST00000341060 ZFP36P26651 326 aaKnown RBP11.38□□□□□ -0.59
TDP2-201ENST00000341060 CSN1S1P47710 185 aa11.38□□□□□ -0.59
TDP2-201ENST00000341060 GAGE1Q13065 139 aa11.38□□□□□ -0.59
TDP2-201ENST00000341060 ZNF124Q15973 351 aa11.38□□□□□ -0.59
TDP2-201ENST00000341060 SPTBN1Q01082 2364 aaKnown RBP11.37□□□□□ -0.59
TDP2-201ENST00000341060 ASH1LQ9NR48 2969 aaKnown RBP11.37□□□□□ -0.59
TDP2-201ENST00000341060 OR2T8A6NH00 312 aa11.37□□□□□ -0.59
TDP2-201ENST00000341060 OR4C46A6NHA9 309 aa11.37□□□□□ -0.59
TDP2-201ENST00000341060 ARL6IP6Q8N6S5 226 aa11.37□□□□□ -0.59
TDP2-201ENST00000341060 SIRPDQ9H106 197 aa11.37□□□□□ -0.59
TDP2-201ENST00000341060 MRPS16Q9Y3D3 137 aaKnown RBP11.37□□□□□ -0.59
TDP2-201ENST00000341060 HIVEP3Q5T1R4 2406 aa11.37□□□□□ -0.59
TDP2-201ENST00000341060 IGHV7-81A0A0B4J1V7 117 aa11.36□□□□□ -0.59
TDP2-201ENST00000341060 CTSGP08311 255 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms