RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TMEM256Q8N2U0 113 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 SMIM12Q96EX1 92 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 TMEM70Q9BUB7 260 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 ARHGAP32A7KAX9 2087 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 LINC00587B1AMM8 73 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 AMBPP02760 352 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 ACTL10Q5JWF8 245 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 ZNF329Q86UD4 541 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 SMAD7O15105 426 aaKnown RBP5.03□□□□□ -1.6
PRKDC-202ENST00000338368 APOHP02749 345 aaPredicted RBP5.03□□□□□ -1.6
PRKDC-202ENST00000338368 C11orf52Q96A22 123 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 RAX2Q96IS3 184 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 SHANK2-AS3Q9BTD1 123 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 IGLV1-47P01700 117 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 ZNF841Q6ZN19 808 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 DSCAML1Q8TD84 2053 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 MIEN1Q9BRT3 115 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 PSG3Q16557 428 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 UBE2L6O14933 153 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 C1orf122Q6ZSJ8 110 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 C1QTNF4Q9BXJ3 329 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 M0R381 172 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 IGLC1P0CG04 106 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 NRN1Q9NPD7 142 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 EREGO14944 169 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 GZMBP10144 247 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 ASIPP42127 132 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 NMUP48645 174 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 CIRBPQ14011 172 aaKnown RBP5.03□□□□□ -1.6
PRKDC-202ENST00000338368 LINC01559Q495D7 138 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 OR10J3Q5JRS4 329 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 SPANXCQ9NY87 97 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 HIVEP3Q5T1R4 2406 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 TMEM249Q2WGJ8 235 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 UTF1Q5T230 341 aa5.03□□□□□ -1.6
PRKDC-202ENST00000338368 IL17DQ8TAD2 202 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 SLC25A16P16260 332 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 SP5Q6BEB4 398 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-202ENST00000338368 THAP8Q8NA92 274 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 ZNF324O75467 553 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-202ENST00000338368 ASCL2Q99929 193 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 PRR31Q5SQ13 230 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 ZNF491Q8N8L2 437 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 ATP6V0E1O15342 81 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 NDPQ00604 133 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 RUSC1-AS1Q66K80 236 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 IGFL4Q6B9Z1 124 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 TYMSP04818 313 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 YPEL3P61236 119 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-202ENST00000338368 ORMDL3Q8N138 153 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 IGHV2-70DA0A0C4DH43 119 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 RNF224P0DH78 156 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 SLC25A2Q9BXI2 301 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 SLC25A34Q6PIV7 304 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 ZNF295-AS1Q8N0V1 137 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 FAM110DQ8TAY7 271 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-202ENST00000338368 FBLN7Q53RD9 439 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 OR11H6Q8NGC7 330 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 DUX5Q96PT3 197 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 PRDM13Q9H4Q3 707 aa5.02□□□□□ -1.61
PRKDC-202ENST00000338368 C18orf15Q96N68 181 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 P0C879 139 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 SIGLEC15Q6ZMC9 328 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 G3V318 75 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 SSBP2P81877 361 aaPredicted RBP5.01□□□□□ -1.61
PRKDC-202ENST00000338368 NUP35Q8NFH5 326 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 JKAMPQ9P055 326 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 V9GYV3 84 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 TRBV19A0A075B6N1 114 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 MSMBP08118 114 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 RPL24P83731 157 aaKnown RBP5.01□□□□□ -1.61
PRKDC-202ENST00000338368 ST6GALNAC6Q969X2 333 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 IGHV3OR16-12A0A075B7B8 117 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 J3QLI3 93 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 IGLC7A0M8Q6 106 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 C9orf139Q6ZV77 190 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 TRAV21A0A0B4J279 112 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 NIT1Q86X76 327 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 DMRTC2Q8IXT2 367 aaPredicted RBP5.01□□□□□ -1.61
PRKDC-202ENST00000338368 IGHV1-69DA0A0B4J2H0 117 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 IGHV1-69P01742 117 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 RNF151Q2KHN1 245 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 OVOL1O14753 267 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 ZNF25P17030 456 aaPredicted RBP5.01□□□□□ -1.61
PRKDC-202ENST00000338368 CD33P20138 364 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 GLMPQ8WWB7 406 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 RITA1Q96K30 269 aa5.01□□□□□ -1.61
PRKDC-202ENST00000338368 OVOL3O00110 214 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 ZNF138P52744 262 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 PDE6HQ13956 83 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 LYZL1Q6UWQ5 148 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 TRBV7-1A0A0A6YYK4 115 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 E7EUB6 86 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 DAZAP2Q15038 168 aaPredicted RBP5□□□□□ -1.61
PRKDC-202ENST00000338368 RASL11AQ6T310 242 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 OR4C46A6NHA9 309 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 SCGB1D4Q6XE38 83 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 C1orf229Q6ZS94 237 aaPredicted RBP5□□□□□ -1.61
PRKDC-202ENST00000338368 Q8TAT8 98 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 AGRNO00468 2067 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms