RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SMIM27A0A1W2PRY6 76 aa13.07□□□□□ -0.32
NPHP3-201ENST00000337331 OTORQ9NRC9 128 aa13.07□□□□□ -0.32
NPHP3-201ENST00000337331 Q6AWC8 147 aa13.07□□□□□ -0.32
NPHP3-201ENST00000337331 CLEC19AQ6UXS0 136 aa13.07□□□□□ -0.32
NPHP3-201ENST00000337331 HOXA3O43365 443 aaPredicted RBP13.07□□□□□ -0.32
NPHP3-201ENST00000337331 ZNF56Q15929 161 aa13.07□□□□□ -0.32
NPHP3-201ENST00000337331 PIMREGQ9BSJ6 248 aa13.06□□□□□ -0.32
NPHP3-201ENST00000337331 PCNX3Q9H6A9 2034 aa13.06□□□□□ -0.32
NPHP3-201ENST00000337331 WNK1Q9H4A3 2382 aa13.06□□□□□ -0.32
NPHP3-201ENST00000337331 MYOD1P15172 320 aa13.06□□□□□ -0.32
NPHP3-201ENST00000337331 Q6ZS49 121 aa13.06□□□□□ -0.32
NPHP3-201ENST00000337331 C2orf70A6NJV1 201 aa13.06□□□□□ -0.32
NPHP3-201ENST00000337331 TMEM262E9PQX1 116 aa13.06□□□□□ -0.32
NPHP3-201ENST00000337331 K7EMI3 77 aa13.06□□□□□ -0.32
NPHP3-201ENST00000337331 NDUFA3O95167 84 aa13.06□□□□□ -0.32
NPHP3-201ENST00000337331 TRBV20-1A0A075B6N2 111 aa13.06□□□□□ -0.32
NPHP3-201ENST00000337331 GFRA3O60609 400 aa13.06□□□□□ -0.32
NPHP3-201ENST00000337331 COX6CP09669 75 aa13.06□□□□□ -0.32
NPHP3-201ENST00000337331 NEU4Q8WWR8 484 aaPredicted RBP13.06□□□□□ -0.32
NPHP3-201ENST00000337331 PCP2Q8IVA1 136 aa13.05□□□□□ -0.32
NPHP3-201ENST00000337331 TIMM23O14925 209 aa13.05□□□□□ -0.32
NPHP3-201ENST00000337331 IFI27P40305 119 aaPredicted RBP13.05□□□□□ -0.32
NPHP3-201ENST00000337331 PSG8Q9UQ74 426 aa13.05□□□□□ -0.32
NPHP3-201ENST00000337331 KIAA1671Q9BY89 1806 aa13.05□□□□□ -0.32
NPHP3-201ENST00000337331 CENPFP49454 3210 aa13.05□□□□□ -0.32
NPHP3-201ENST00000337331 TRAV8-1A0A0A6YYK1 113 aa13.05□□□□□ -0.32
NPHP3-201ENST00000337331 A8MWV9 139 aa13.05□□□□□ -0.32
NPHP3-201ENST00000337331 GGTLC3B5MD39 225 aa13.05□□□□□ -0.32
NPHP3-201ENST00000337331 C1orf122Q6ZSJ8 110 aa13.05□□□□□ -0.32
NPHP3-201ENST00000337331 LGALS3P17931 250 aaKnown RBP13.04□□□□□ -0.32
NPHP3-201ENST00000337331 RSPO1Q2MKA7 263 aaPredicted RBP13.04□□□□□ -0.32
NPHP3-201ENST00000337331 ANAPC1Q9H1A4 1944 aa13.04□□□□□ -0.32
NPHP3-201ENST00000337331 TMEM170BQ5T4T1 132 aa13.04□□□□□ -0.32
NPHP3-201ENST00000337331 MDS2Q8NDY4 140 aa13.04□□□□□ -0.32
NPHP3-201ENST00000337331 MED13Q9UHV7 2174 aa13.04□□□□□ -0.32
NPHP3-201ENST00000337331 FABP5P3A8MUU1 101 aa13.04□□□□□ -0.32
NPHP3-201ENST00000337331 IGHV3-11P01762 117 aa13.04□□□□□ -0.32
NPHP3-201ENST00000337331 VCX2Q9H322 139 aa13.04□□□□□ -0.32
NPHP3-201ENST00000337331 SLC25A15Q9Y619 301 aa13.04□□□□□ -0.32
NPHP3-201ENST00000337331 ATP5LO75964 103 aa13.03□□□□□ -0.32
NPHP3-201ENST00000337331 LEPP41159 167 aa13.03□□□□□ -0.32
NPHP3-201ENST00000337331 ZC2HC1BQ5TFG8 222 aa13.03□□□□□ -0.32
NPHP3-201ENST00000337331 OR5AN1Q8NGI8 311 aa13.03□□□□□ -0.32
NPHP3-201ENST00000337331 PVRIGQ6DKI7 326 aa13.03□□□□□ -0.32
NPHP3-201ENST00000337331 Q8N976 141 aa13.03□□□□□ -0.32
NPHP3-201ENST00000337331 C11orf52Q96A22 123 aa13.03□□□□□ -0.32
NPHP3-201ENST00000337331 D6R8Y8 96 aa13.03□□□□□ -0.32
NPHP3-201ENST00000337331 SNRPD3P62318 126 aaKnown RBP13.03□□□□□ -0.32
NPHP3-201ENST00000337331 COLCA1Q6ZS62 124 aa13.03□□□□□ -0.32
NPHP3-201ENST00000337331 RPRMLQ8N4K4 120 aa13.03□□□□□ -0.32
NPHP3-201ENST00000337331 RNF183Q96D59 192 aa13.03□□□□□ -0.32
NPHP3-201ENST00000337331 MLANAQ16655 118 aa13.02□□□□□ -0.32
NPHP3-201ENST00000337331 PGPEP1Q9NXJ5 209 aa13.02□□□□□ -0.32
NPHP3-201ENST00000337331 MUC6Q6W4X9 2439 aa13.02□□□□□ -0.32
NPHP3-201ENST00000337331 CEACAM4O75871 244 aa13.02□□□□□ -0.32
NPHP3-201ENST00000337331 C19orf54Q5BKX5 351 aa13.02□□□□□ -0.33
NPHP3-201ENST00000337331 ZNF256Q9Y2P7 627 aaPredicted RBP13.02□□□□□ -0.33
NPHP3-201ENST00000337331 CSPG4Q6UVK1 2322 aa13.02□□□□□ -0.33
NPHP3-201ENST00000337331 ASIPP42127 132 aa13.02□□□□□ -0.33
NPHP3-201ENST00000337331 DLX4Q92988 240 aaPredicted RBP13.02□□□□□ -0.33
NPHP3-201ENST00000337331 SCGB3A1Q96QR1 104 aa13.02□□□□□ -0.33
NPHP3-201ENST00000337331 MYO18BQ8IUG5 2567 aa13.01□□□□□ -0.33
NPHP3-201ENST00000337331 IGKV1D-17A0A075B6S4 117 aa13.01□□□□□ -0.33
NPHP3-201ENST00000337331 IGKCP01834 107 aa13.01□□□□□ -0.33
NPHP3-201ENST00000337331 GAGE12JA6NER3 117 aa13.01□□□□□ -0.33
NPHP3-201ENST00000337331 PMS2P5A8MQ11 134 aa13.01□□□□□ -0.33
NPHP3-201ENST00000337331 GAGE7O76087 117 aa13.01□□□□□ -0.33
NPHP3-201ENST00000337331 GAGE12FP0CL80 117 aa13.01□□□□□ -0.33
NPHP3-201ENST00000337331 GAGE12GP0CL81 117 aa13.01□□□□□ -0.33
NPHP3-201ENST00000337331 GAGE12IP0CL82 117 aa13.01□□□□□ -0.33
NPHP3-201ENST00000337331 COX6B1P14854 86 aa13.01□□□□□ -0.33
NPHP3-201ENST00000337331 GAGE4Q13068 117 aa13.01□□□□□ -0.33
NPHP3-201ENST00000337331 SRSF6Q13247 344 aaKnown RBP13.01□□□□□ -0.33
NPHP3-201ENST00000337331 C8orf86Q6ZUL3 223 aa13.01□□□□□ -0.33
NPHP3-201ENST00000337331 DPM2O94777 84 aa13□□□□□ -0.33
NPHP3-201ENST00000337331 NCR2O95944 276 aa13□□□□□ -0.33
NPHP3-201ENST00000337331 TMEM200BQ69YZ2 307 aa13□□□□□ -0.33
NPHP3-201ENST00000337331 JMJD8Q96S16 334 aa13□□□□□ -0.33
NPHP3-201ENST00000337331 SPAG8Q99932 426 aaPredicted RBP13□□□□□ -0.33
NPHP3-201ENST00000337331 ZNF295-AS1Q8N0V1 137 aa13□□□□□ -0.33
NPHP3-201ENST00000337331 VDAC2P45880 294 aaPredicted RBP13□□□□□ -0.33
NPHP3-201ENST00000337331 EXOC3-AS1Q8N2X6 119 aa13□□□□□ -0.33
NPHP3-201ENST00000337331 C8orf46Q8TAG6 207 aa13□□□□□ -0.33
NPHP3-201ENST00000337331 RAX2Q96IS3 184 aa13□□□□□ -0.33
NPHP3-201ENST00000337331 KLF5Q13887 457 aaPredicted RBP12.99□□□□□ -0.33
NPHP3-201ENST00000337331 C20orf78Q9BR46 151 aa12.99□□□□□ -0.33
NPHP3-201ENST00000337331 NPIPB5A8MRT5 1133 aa12.99□□□□□ -0.33
NPHP3-201ENST00000337331 DTX1Q86Y01 620 aa12.99□□□□□ -0.33
NPHP3-201ENST00000337331 PAPPA-AS1Q5QFB9 102 aa12.99□□□□□ -0.33
NPHP3-201ENST00000337331 VKORC1Q9BQB6 163 aa12.99□□□□□ -0.33
NPHP3-201ENST00000337331 ZNF747Q9BV97 191 aa12.99□□□□□ -0.33
NPHP3-201ENST00000337331 C7orf69Q9H7B7 122 aa12.99□□□□□ -0.33
NPHP3-201ENST00000337331 RRN3P1Q2M238 152 aa12.99□□□□□ -0.33
NPHP3-201ENST00000337331 TSPAN13O95857 204 aa12.98□□□□□ -0.33
NPHP3-201ENST00000337331 KLF17Q5JT82 389 aaPredicted RBP12.98□□□□□ -0.33
NPHP3-201ENST00000337331 TMEM167AQ8TBQ9 72 aa12.98□□□□□ -0.33
NPHP3-201ENST00000337331 ASCL2Q99929 193 aa12.98□□□□□ -0.33
NPHP3-201ENST00000337331 PROK2Q9HC23 129 aa12.98□□□□□ -0.33
NPHP3-201ENST00000337331 PRSS29PA6NIE9 313 aa12.98□□□□□ -0.33
NPHP3-201ENST00000337331 IGHV1-8P0DP01 117 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms