RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 CEACAM3P40198 252 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 C2orf83Q53S99 150 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 TMEM136Q6ZRR5 245 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 LCNL1Q6ZST4 164 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 MAPK1IP1LQ8NDC0 245 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 SIGLEC9Q9Y336 463 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 MT-ND6P03923 174 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 CX3CL1P78423 397 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 OCIAD2Q56VL3 154 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 DNLZQ5SXM8 178 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 SFTA2Q6UW10 78 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 MAP1LC3CQ9BXW4 147 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 NDUFA4L2Q9NRX3 87 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 LAMTOR2Q9Y2Q5 125 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 A1L4Q6 167 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 TMEM189A5PLL7 270 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 B9A039 149 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 LINC00173Q6ZV60 143 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 TEX45Q8NA69 505 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 STXBP6Q8NFX7 210 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 CACNG8Q8WXS5 425 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 DUX5Q96PT3 197 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 SLC25A2Q9BXI2 301 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 RABAC1Q9UI14 185 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 IZUMO1RA6ND01 250 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 C22orf46C9J442 243 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 F5H697 171 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 THBDP07204 575 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 CD99P14209 185 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 PRR20EP86478 221 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 PRR20CP86479 221 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 PRR20DP86480 221 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 PRR20BP86481 221 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 PRR20AP86496 221 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 PATE2Q6UY27 113 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.59□□□□□ -1.35
HPS4-201ENST00000336873 TSKUQ8WUA8 353 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 RNF125Q96EQ8 232 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 CITED1Q99966 193 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 SLC25A39Q9BZJ4 359 aaPredicted RBP6.59□□□□□ -1.35
HPS4-201ENST00000336873 CST9LQ9H4G1 147 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 RPP21Q9H633 154 aaKnown RBP6.59□□□□□ -1.35
HPS4-201ENST00000336873 THYN1Q9P016 225 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 CSMD2Q7Z408 3487 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 PRRC2AP48634 2157 aaKnown RBP6.59□□□□□ -1.35
HPS4-201ENST00000336873 ARMS2P0C7Q2 107 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 C1orf174Q8IYL3 243 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 NDFIP1Q9BT67 221 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 AP5S1Q9NUS5 200 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 UQCR10Q9UDW1 63 aa6.59□□□□□ -1.35
HPS4-201ENST00000336873 SCGB2A1O75556 95 aa6.59□□□□□ -1.36
HPS4-201ENST00000336873 PF4V1P10720 104 aa6.59□□□□□ -1.36
HPS4-201ENST00000336873 Q71RC1 249 aaPredicted RBP6.59□□□□□ -1.36
HPS4-201ENST00000336873 ZNF503Q96F45 646 aa6.59□□□□□ -1.36
HPS4-201ENST00000336873 OSTCQ9NRP0 149 aa6.59□□□□□ -1.36
HPS4-201ENST00000336873 G3V318 75 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 TCRAP04437 139 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 MEF2CQ06413 473 aaPredicted RBP6.58□□□□□ -1.36
HPS4-201ENST00000336873 FAM162BQ5T6X4 162 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 BCL6BQ8N143 479 aaPredicted RBP6.58□□□□□ -1.36
HPS4-201ENST00000336873 RNF182Q8N6D2 247 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 OR4B1Q8NGF8 309 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 TMEM70Q9BUB7 260 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 TMEM191AQ9H0A3 160 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 TMEM213A2RRL7 107 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 BUB1B-PAK6H3BSN5 160 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 M0R381 172 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 LHBP01229 141 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 HLA-DRB1P01911 266 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 MGPP08493 103 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 CFHR2P36980 270 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 PLP1P60201 277 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 ZNF329Q86UD4 541 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 TMEM167AQ8TBQ9 72 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 C18orf32Q8TCD1 76 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 DDB2Q92466 427 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 C8orf49Q96NF6 230 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 MRPL32Q9BYC8 188 aaKnown RBP6.58□□□□□ -1.36
HPS4-201ENST00000336873 C21orf62Q9NYP8 219 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 A0A087X0K7 114 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 GAGE10A6NGK3 116 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 P0C879 139 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 KLRB1Q12918 225 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 VWC2Q2TAL6 325 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 SPANXN1Q5VSR9 72 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 OR5AN1Q8NGI8 311 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 GRAMD2BQ96HH9 432 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 RNF114Q9Y508 228 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 PCSK5Q92824 1860 aa6.58□□□□□ -1.36
HPS4-201ENST00000336873 A0A1B0GUT8 65 aa6.57□□□□□ -1.36
HPS4-201ENST00000336873 C7orf71A4D174 169 aa6.57□□□□□ -1.36
HPS4-201ENST00000336873 MFAP4P55083 255 aa6.57□□□□□ -1.36
HPS4-201ENST00000336873 ERCC8Q13216 396 aa6.57□□□□□ -1.36
HPS4-201ENST00000336873 RIGQ13278 110 aa6.57□□□□□ -1.36
HPS4-201ENST00000336873 TMEM95Q3KNT9 176 aa6.57□□□□□ -1.36
HPS4-201ENST00000336873 MPV17L2Q567V2 206 aa6.57□□□□□ -1.36
HPS4-201ENST00000336873 AMN1Q8IY45 258 aa6.57□□□□□ -1.36
HPS4-201ENST00000336873 RNASEH2CQ8TDP1 164 aaKnown RBP6.57□□□□□ -1.36
HPS4-201ENST00000336873 GNB1LQ9BYB4 327 aa6.57□□□□□ -1.36
HPS4-201ENST00000336873 J3QR89 54 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms