RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 A0A1W2PRD5 423 aa13.22□□□□□ -0.29
CDC42EP4-201ENST00000335793 A0A1W2PRF3 423 aa13.22□□□□□ -0.29
CDC42EP4-201ENST00000335793 A0A1W2PRM7 423 aa13.22□□□□□ -0.29
CDC42EP4-201ENST00000335793 GOLT1AQ6ZVE7 132 aa13.22□□□□□ -0.29
CDC42EP4-201ENST00000335793 RNASE6Q93091 150 aaKnown RBP13.22□□□□□ -0.29
CDC42EP4-201ENST00000335793 RPEQ96AT9 228 aa13.22□□□□□ -0.29
CDC42EP4-201ENST00000335793 LINC00574Q9H8X3 128 aa13.22□□□□□ -0.29
CDC42EP4-201ENST00000335793 ST20Q9HBF5 79 aa13.22□□□□□ -0.29
CDC42EP4-201ENST00000335793 S4R3C0 116 aa13.22□□□□□ -0.29
CDC42EP4-201ENST00000335793 PSMB11A5LHX3 300 aa13.21□□□□□ -0.29
CDC42EP4-201ENST00000335793 HBBP68871 147 aa13.21□□□□□ -0.29
CDC42EP4-201ENST00000335793 NUP37Q8NFH4 326 aa13.21□□□□□ -0.29
CDC42EP4-201ENST00000335793 NEU4Q8WWR8 484 aaPredicted RBP13.21□□□□□ -0.29
CDC42EP4-201ENST00000335793 ANKHD1Q8IWZ3 2542 aaKnown RBP13.21□□□□□ -0.29
CDC42EP4-201ENST00000335793 C2orf70A6NJV1 201 aa13.21□□□□□ -0.29
CDC42EP4-201ENST00000335793 IGHV1-8P0DP01 117 aa13.21□□□□□ -0.29
CDC42EP4-201ENST00000335793 BPIFA4PQ86YQ2 179 aa13.21□□□□□ -0.29
CDC42EP4-201ENST00000335793 EXOC3-AS1Q8N2X6 119 aa13.21□□□□□ -0.29
CDC42EP4-201ENST00000335793 ABHD17AQ96GS6 310 aa13.21□□□□□ -0.29
CDC42EP4-201ENST00000335793 RPP21Q9H633 154 aaKnown RBP13.21□□□□□ -0.29
CDC42EP4-201ENST00000335793 HIGD1AQ9Y241 93 aa13.21□□□□□ -0.29
CDC42EP4-201ENST00000335793 CEACAM4O75871 244 aa13.21□□□□□ -0.3
CDC42EP4-201ENST00000335793 SMPXQ9UHP9 88 aa13.21□□□□□ -0.3
CDC42EP4-201ENST00000335793 A6NJY4 79 aa13.2□□□□□ -0.3
CDC42EP4-201ENST00000335793 LOXP28300 417 aaPredicted RBP13.2□□□□□ -0.3
CDC42EP4-201ENST00000335793 CIARTQ8N365 385 aaPredicted RBP13.2□□□□□ -0.3
CDC42EP4-201ENST00000335793 RASL11BQ9BPW5 248 aa13.2□□□□□ -0.3
CDC42EP4-201ENST00000335793 K7EMI3 77 aa13.2□□□□□ -0.3
CDC42EP4-201ENST00000335793 TMEM133Q9H2Q1 129 aa13.2□□□□□ -0.3
CDC42EP4-201ENST00000335793 NGBQ9NPG2 151 aa13.2□□□□□ -0.3
CDC42EP4-201ENST00000335793 FCN3O75636 299 aa13.19□□□□□ -0.3
CDC42EP4-201ENST00000335793 C3orf36Q3SXR2 165 aa13.19□□□□□ -0.3
CDC42EP4-201ENST00000335793 TMEM97Q5BJF2 176 aa13.19□□□□□ -0.3
CDC42EP4-201ENST00000335793 IGFL3Q6UXB1 125 aa13.19□□□□□ -0.3
CDC42EP4-201ENST00000335793 K7EP34 96 aa13.19□□□□□ -0.3
CDC42EP4-201ENST00000335793 IGLV2-23P01705 113 aa13.19□□□□□ -0.3
CDC42EP4-201ENST00000335793 HES1Q14469 280 aa13.19□□□□□ -0.3
CDC42EP4-201ENST00000335793 UFSP1Q6NVU6 142 aa13.19□□□□□ -0.3
CDC42EP4-201ENST00000335793 LINC00322Q6ZN03 302 aaPredicted RBP13.19□□□□□ -0.3
CDC42EP4-201ENST00000335793 FAM231DQ6ZW35 169 aa13.19□□□□□ -0.3
CDC42EP4-201ENST00000335793 KIR3DS1Q14943 382 aa13.19□□□□□ -0.3
CDC42EP4-201ENST00000335793 NEGR1Q7Z3B1 354 aa13.19□□□□□ -0.3
CDC42EP4-201ENST00000335793 SH2D6Q7Z4S9 175 aa13.19□□□□□ -0.3
CDC42EP4-201ENST00000335793 PPP1R27Q86WC6 154 aa13.18□□□□□ -0.3
CDC42EP4-201ENST00000335793 ONECUT1Q9UBC0 465 aa13.18□□□□□ -0.3
CDC42EP4-201ENST00000335793 F11RQ9Y624 299 aaKnown RBP13.18□□□□□ -0.3
CDC42EP4-201ENST00000335793 KALRNO60229 2985 aa13.18□□□□□ -0.3
CDC42EP4-201ENST00000335793 LEPROTL1O95214 131 aa13.18□□□□□ -0.3
CDC42EP4-201ENST00000335793 TCRAP04437 139 aa13.18□□□□□ -0.3
CDC42EP4-201ENST00000335793 HERV-K104P63124 156 aa13.18□□□□□ -0.3
CDC42EP4-201ENST00000335793 ANXA2RQ3ZCQ2 193 aa13.18□□□□□ -0.3
CDC42EP4-201ENST00000335793 VWC2LB2RUY7 222 aa13.17□□□□□ -0.3
CDC42EP4-201ENST00000335793 HIST1H1AQ02539 215 aaPredicted RBP13.17□□□□□ -0.3
CDC42EP4-201ENST00000335793 ARHGAP32A7KAX9 2087 aa13.17□□□□□ -0.3
CDC42EP4-201ENST00000335793 THBDP07204 575 aa13.17□□□□□ -0.3
CDC42EP4-201ENST00000335793 THAP8Q8NA92 274 aa13.17□□□□□ -0.3
CDC42EP4-201ENST00000335793 IGFBPL1Q8WX77 278 aa13.17□□□□□ -0.3
CDC42EP4-201ENST00000335793 TMSB15BA0A087X1C1 80 aa13.17□□□□□ -0.3
CDC42EP4-201ENST00000335793 C9orf118A6NHY6 69 aa13.17□□□□□ -0.3
CDC42EP4-201ENST00000335793 SRSF12Q8WXF0 261 aaKnown RBP13.17□□□□□ -0.3
CDC42EP4-201ENST00000335793 SIGLEC9Q9Y336 463 aa13.17□□□□□ -0.3
CDC42EP4-201ENST00000335793 RASL11AQ6T310 242 aa13.16□□□□□ -0.3
CDC42EP4-201ENST00000335793 ADAMTSL5Q6ZMM2 481 aa13.16□□□□□ -0.3
CDC42EP4-201ENST00000335793 TEX45Q8NA69 505 aa13.16□□□□□ -0.3
CDC42EP4-201ENST00000335793 C8orf46Q8TAG6 207 aa13.16□□□□□ -0.3
CDC42EP4-201ENST00000335793 MBD6Q96DN6 1003 aa13.16□□□□□ -0.3
CDC42EP4-201ENST00000335793 ACACBO00763 2458 aa13.16□□□□□ -0.3
CDC42EP4-201ENST00000335793 SYS1-DBNDD2H3BUS1 97 aa13.16□□□□□ -0.3
CDC42EP4-201ENST00000335793 TMEM95Q3KNT9 176 aa13.16□□□□□ -0.3
CDC42EP4-201ENST00000335793 CD300EQ496F6 205 aaPredicted RBP13.16□□□□□ -0.3
CDC42EP4-201ENST00000335793 TMEM155Q4W5P6 130 aa13.16□□□□□ -0.3
CDC42EP4-201ENST00000335793 RALYQ9UKM9 306 aaKnown RBP13.16□□□□□ -0.3
CDC42EP4-201ENST00000335793 TRGV9Q99603 122 aa13.15□□□□□ -0.3
CDC42EP4-201ENST00000335793 ETDBQ3ZM63 59 aa13.15□□□□□ -0.3
CDC42EP4-201ENST00000335793 FMC1Q96HJ9 113 aa13.15□□□□□ -0.3
CDC42EP4-201ENST00000335793 TMEM191AQ9H0A3 160 aa13.15□□□□□ -0.3
CDC42EP4-201ENST00000335793 E7EQL1 145 aa13.15□□□□□ -0.3
CDC42EP4-201ENST00000335793 RBPMS2Q6ZRY4 209 aaKnown RBP13.15□□□□□ -0.3
CDC42EP4-201ENST00000335793 GTSF1Q8WW33 167 aa13.15□□□□□ -0.3
CDC42EP4-201ENST00000335793 WFDC2Q14508 124 aa13.14□□□□□ -0.31
CDC42EP4-201ENST00000335793 PSG3Q16557 428 aa13.14□□□□□ -0.31
CDC42EP4-201ENST00000335793 KLF17Q5JT82 389 aaPredicted RBP13.14□□□□□ -0.31
CDC42EP4-201ENST00000335793 LINC01560Q8TB33 94 aa13.14□□□□□ -0.31
CDC42EP4-201ENST00000335793 WIPF2Q8TF74 440 aaPredicted RBP13.14□□□□□ -0.31
CDC42EP4-201ENST00000335793 IGHV1-3A0A0C4DH29 117 aa13.14□□□□□ -0.31
CDC42EP4-201ENST00000335793 SLC25A39Q9BZJ4 359 aaPredicted RBP13.14□□□□□ -0.31
CDC42EP4-201ENST00000335793 FCGR2BP31994 310 aaPredicted RBP13.14□□□□□ -0.31
CDC42EP4-201ENST00000335793 INSL3P51460 131 aa13.14□□□□□ -0.31
CDC42EP4-201ENST00000335793 ATP5L2Q7Z4Y8 100 aa13.14□□□□□ -0.31
CDC42EP4-201ENST00000335793 SCRT2Q9NQ03 307 aa13.14□□□□□ -0.31
CDC42EP4-201ENST00000335793 ATRXP46100 2492 aa13.13□□□□□ -0.31
CDC42EP4-201ENST00000335793 FABP2P12104 132 aa13.13□□□□□ -0.31
CDC42EP4-201ENST00000335793 PRR30Q53SZ7 412 aaPredicted RBP13.13□□□□□ -0.31
CDC42EP4-201ENST00000335793 FAM162BQ5T6X4 162 aa13.13□□□□□ -0.31
CDC42EP4-201ENST00000335793 LINC00311Q8N616 119 aa13.13□□□□□ -0.31
CDC42EP4-201ENST00000335793 CD3EP07766 207 aa13.13□□□□□ -0.31
CDC42EP4-201ENST00000335793 C17orf77Q96MU5 243 aa13.13□□□□□ -0.31
CDC42EP4-201ENST00000335793 A6NDN8 102 aa13.12□□□□□ -0.31
CDC42EP4-201ENST00000335793 FAM90A27PA6NNH2 459 aa13.12□□□□□ -0.31
CDC42EP4-201ENST00000335793 LY6HO94772 140 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms