RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 HAX1O00165 279 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 EPDR1Q9UM22 224 aa9.51□□□□□ -0.89
HDAC6-201ENST00000334136 H7C2G1 150 aa9.5□□□□□ -0.89
HDAC6-201ENST00000334136 NUPR1O60356 82 aa9.5□□□□□ -0.89
HDAC6-201ENST00000334136 PF4V1P10720 104 aa9.5□□□□□ -0.89
HDAC6-201ENST00000334136 SAA4P35542 130 aa9.5□□□□□ -0.89
HDAC6-201ENST00000334136 FXYD7P58549 80 aa9.5□□□□□ -0.89
HDAC6-201ENST00000334136 SFTA2Q6UW10 78 aa9.5□□□□□ -0.89
HDAC6-201ENST00000334136 TSKUQ8WUA8 353 aa9.5□□□□□ -0.89
HDAC6-201ENST00000334136 AREGP15514 252 aa9.5□□□□□ -0.89
HDAC6-201ENST00000334136 JMJD1CQ15652 2540 aa9.5□□□□□ -0.89
HDAC6-201ENST00000334136 Q71RC1 249 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-201ENST00000334136 CACNG8Q8WXS5 425 aa9.5□□□□□ -0.89
HDAC6-201ENST00000334136 OOSP1A8MZH6 123 aa9.5□□□□□ -0.89
HDAC6-201ENST00000334136 C9JCJ5 164 aa9.5□□□□□ -0.89
HDAC6-201ENST00000334136 SRD5A1P18405 259 aa9.5□□□□□ -0.89
HDAC6-201ENST00000334136 RELQ04864 619 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-201ENST00000334136 TPTE2P1Q5T6R2 138 aa9.5□□□□□ -0.89
HDAC6-201ENST00000334136 C11orf71Q6IPW1 123 aa9.5□□□□□ -0.89
HDAC6-201ENST00000334136 MAP1LC3AQ9H492 121 aa9.5□□□□□ -0.89
HDAC6-201ENST00000334136 LSM4Q9Y4Z0 139 aaKnown RBP9.5□□□□□ -0.89
HDAC6-201ENST00000334136 TRAV8-1A0A0A6YYK1 113 aa9.49□□□□□ -0.89
HDAC6-201ENST00000334136 BUB1B-PAK6H3BSN5 160 aa9.49□□□□□ -0.89
HDAC6-201ENST00000334136 UBE2E1P51965 193 aa9.49□□□□□ -0.89
HDAC6-201ENST00000334136 NUP35Q8NFH5 326 aa9.49□□□□□ -0.89
HDAC6-201ENST00000334136 MYO9AB2RTY4 2548 aa9.49□□□□□ -0.89
HDAC6-201ENST00000334136 PSG1P11464 419 aa9.49□□□□□ -0.89
HDAC6-201ENST00000334136 SLC25A48Q6ZT89 311 aaKnown RBP9.49□□□□□ -0.89
HDAC6-201ENST00000334136 IGHV3-49A0A0A0MS15 119 aa9.49□□□□□ -0.89
HDAC6-201ENST00000334136 J3QLI3 93 aa9.49□□□□□ -0.89
HDAC6-201ENST00000334136 TYMSP04818 313 aa9.49□□□□□ -0.89
HDAC6-201ENST00000334136 DMXL1Q9Y485 3027 aa9.49□□□□□ -0.89
HDAC6-201ENST00000334136 H3BUX3 64 aa9.49□□□□□ -0.89
HDAC6-201ENST00000334136 CACNG7P62955 275 aa9.49□□□□□ -0.89
HDAC6-201ENST00000334136 C17orf58Q2M2W7 97 aa9.49□□□□□ -0.89
HDAC6-201ENST00000334136 STPG4Q8N801 248 aa9.49□□□□□ -0.89
HDAC6-201ENST00000334136 DUX5Q96PT3 197 aa9.49□□□□□ -0.89
HDAC6-201ENST00000334136 IGHV3-23P01764 117 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 SMIM13P0DJ93 91 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 IGLC2P0DOY2 106 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 IGLC3P0DOY3 106 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 HTN1P15515 57 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 PRCDQ00LT1 54 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 RUSC1-AS1Q66K80 236 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 CENPVQ7Z7K6 275 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-201ENST00000334136 LRRC75A-AS1Q8N1F1 130 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 NPFFR1Q9GZQ6 430 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 IGHV1-69DA0A0B4J2H0 117 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 IGHV1-3A0A0C4DH29 117 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 MMP23AO75900 390 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 IGHV1-69P01742 117 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 BMI1P35226 326 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 ATP5IP56385 69 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-201ENST00000334136 ZNRD1Q9P1U0 126 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 NBR2O15453 112 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.48□□□□□ -0.89
HDAC6-201ENST00000334136 FOXA2Q9Y261 457 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-201ENST00000334136 TRBV20OR9-2A0A075B6H5 130 aa9.47□□□□□ -0.89
HDAC6-201ENST00000334136 A0A1W2PPR1 153 aa9.47□□□□□ -0.89
HDAC6-201ENST00000334136 OR2K2Q8NGT1 345 aa9.47□□□□□ -0.89
HDAC6-201ENST00000334136 ASCL2Q99929 193 aa9.47□□□□□ -0.89
HDAC6-201ENST00000334136 CENPEQ02224 2701 aa9.47□□□□□ -0.89
HDAC6-201ENST00000334136 MAJINQ3KP22 176 aa9.47□□□□□ -0.89
HDAC6-201ENST00000334136 TMEM219Q86XT9 240 aa9.47□□□□□ -0.89
HDAC6-201ENST00000334136 CIARTQ8N365 385 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-201ENST00000334136 ST20Q9HBF5 79 aa9.47□□□□□ -0.89
HDAC6-201ENST00000334136 NHP2Q9NX24 153 aaKnown RBP9.47□□□□□ -0.89
HDAC6-201ENST00000334136 COX11Q9Y6N1 276 aa9.47□□□□□ -0.89
HDAC6-201ENST00000334136 NPIPB11E5RHQ5 1161 aa9.46□□□□□ -0.89
HDAC6-201ENST00000334136 KRTAP10-9P60411 292 aa9.46□□□□□ -0.89
HDAC6-201ENST00000334136 RCHY1Q96PM5 261 aa9.46□□□□□ -0.89
HDAC6-201ENST00000334136 ANKRD17O75179 2603 aaKnown RBP9.46□□□□□ -0.89
HDAC6-201ENST00000334136 HELZ2Q9BYK8 2649 aaKnown RBP9.46□□□□□ -0.89
HDAC6-201ENST00000334136 IGKV1-16P04430 117 aa9.46□□□□□ -0.89
HDAC6-201ENST00000334136 C1orf122Q6ZSJ8 110 aa9.46□□□□□ -0.89
HDAC6-201ENST00000334136 EXOC3-AS1Q8N2X6 119 aa9.46□□□□□ -0.89
HDAC6-201ENST00000334136 C18orf32Q8TCD1 76 aa9.46□□□□□ -0.89
HDAC6-201ENST00000334136 SCRT1Q9BWW7 348 aa9.46□□□□□ -0.89
HDAC6-201ENST00000334136 IGHV3-66A0A0C4DH42 116 aa9.46□□□□□ -0.9
HDAC6-201ENST00000334136 TCRBV4S1A1TA0A5B7 111 aa9.46□□□□□ -0.9
HDAC6-201ENST00000334136 C15orf65H3BRN8 121 aa9.46□□□□□ -0.9
HDAC6-201ENST00000334136 M0R3E3 92 aa9.46□□□□□ -0.9
HDAC6-201ENST00000334136 PPIFP30405 207 aaKnown RBP9.46□□□□□ -0.9
HDAC6-201ENST00000334136 Q0VG73 95 aa9.46□□□□□ -0.9
HDAC6-201ENST00000334136 TMEM78Q5T7P6 136 aa9.46□□□□□ -0.9
HDAC6-201ENST00000334136 ORMDL3Q8N138 153 aa9.46□□□□□ -0.9
HDAC6-201ENST00000334136 TEX45Q8NA69 505 aa9.46□□□□□ -0.9
HDAC6-201ENST00000334136 FOXC2Q99958 501 aa9.46□□□□□ -0.9
HDAC6-201ENST00000334136 PRSS22Q9GZN4 317 aa9.46□□□□□ -0.9
HDAC6-201ENST00000334136 IGSF10Q6WRI0 2623 aa9.46□□□□□ -0.9
HDAC6-201ENST00000334136 YPEL3P61236 119 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-201ENST00000334136 SLAQ13239 276 aa9.45□□□□□ -0.9
HDAC6-201ENST00000334136 PPP1R27Q86WC6 154 aa9.45□□□□□ -0.9
HDAC6-201ENST00000334136 ORAOV1Q8WV07 137 aa9.45□□□□□ -0.9
HDAC6-201ENST00000334136 ARHGAP32A7KAX9 2087 aa9.45□□□□□ -0.9
HDAC6-201ENST00000334136 ITGB1BP1O14713 200 aa9.45□□□□□ -0.9
HDAC6-201ENST00000334136 HIST1H1AQ02539 215 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-201ENST00000334136 LYRM7Q5U5X0 104 aa9.45□□□□□ -0.9
HDAC6-201ENST00000334136 ZNF295-AS1Q8N0V1 137 aa9.45□□□□□ -0.9
HDAC6-201ENST00000334136 WFDC11Q8NEX6 87 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms