RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 FAM74A3Q4VXF1 159 aa13.76□□□□□ -0.21
SYNE4-201ENST00000324444 SMPXQ9UHP9 88 aa13.76□□□□□ -0.21
SYNE4-201ENST00000324444 TRBV19A0A075B6N1 114 aa13.75□□□□□ -0.21
SYNE4-201ENST00000324444 IGHV3OR16-8A0A075B7F1 116 aa13.75□□□□□ -0.21
SYNE4-201ENST00000324444 F8W036 122 aa13.75□□□□□ -0.21
SYNE4-201ENST00000324444 MRPS12O15235 138 aaKnown RBP13.75□□□□□ -0.21
SYNE4-201ENST00000324444 WIPF1O43516 503 aa13.75□□□□□ -0.21
SYNE4-201ENST00000324444 SRP19P09132 144 aaKnown RBP13.75□□□□□ -0.21
SYNE4-201ENST00000324444 SFTA3P0C7M3 94 aa13.75□□□□□ -0.21
SYNE4-201ENST00000324444 SRSF3P84103 164 aaKnown RBP13.75□□□□□ -0.21
SYNE4-201ENST00000324444 SOHLH1Q5JUK2 328 aa13.75□□□□□ -0.21
SYNE4-201ENST00000324444 ARL6IP6Q8N6S5 226 aa13.75□□□□□ -0.21
SYNE4-201ENST00000324444 BLNKQ8WV28 456 aa13.75□□□□□ -0.21
SYNE4-201ENST00000324444 AAMDCQ9H7C9 122 aa13.75□□□□□ -0.21
SYNE4-201ENST00000324444 OTORQ9NRC9 128 aa13.75□□□□□ -0.21
SYNE4-201ENST00000324444 CMYA5Q8N3K9 4069 aa13.74□□□□□ -0.21
SYNE4-201ENST00000324444 CCL24O00175 119 aa13.74□□□□□ -0.21
SYNE4-201ENST00000324444 ZNF207O43670 478 aaKnown RBP13.74□□□□□ -0.21
SYNE4-201ENST00000324444 SYNJ2BPP57105 145 aa13.74□□□□□ -0.21
SYNE4-201ENST00000324444 CD81P60033 236 aa13.74□□□□□ -0.21
SYNE4-201ENST00000324444 SUMO1P63165 101 aaKnown RBP13.74□□□□□ -0.21
SYNE4-201ENST00000324444 SIGLEC15Q6ZMC9 328 aa13.74□□□□□ -0.21
SYNE4-201ENST00000324444 C8orf86Q6ZUL3 223 aa13.74□□□□□ -0.21
SYNE4-201ENST00000324444 SLC50A1Q9BRV3 221 aa13.74□□□□□ -0.21
SYNE4-201ENST00000324444 RHPN1-AS1Q9BWJ2 59 aa13.74□□□□□ -0.21
SYNE4-201ENST00000324444 ZNF586Q9NXT0 402 aa13.74□□□□□ -0.21
SYNE4-201ENST00000324444 YTHDF2Q9Y5A9 579 aaKnown RBP13.74□□□□□ -0.21
SYNE4-201ENST00000324444 MYCNOSP40205 109 aa13.73□□□□□ -0.21
SYNE4-201ENST00000324444 RANP62826 216 aaKnown RBP13.73□□□□□ -0.21
SYNE4-201ENST00000324444 FHL3Q13643 280 aa13.73□□□□□ -0.21
SYNE4-201ENST00000324444 TM4SF20Q53R12 229 aa13.73□□□□□ -0.21
SYNE4-201ENST00000324444 GLMPQ8WWB7 406 aa13.73□□□□□ -0.21
SYNE4-201ENST00000324444 HIST1H2BAQ96A08 127 aa13.73□□□□□ -0.21
SYNE4-201ENST00000324444 NOTCH1P46531 2555 aa13.73□□□□□ -0.21
SYNE4-201ENST00000324444 H3BQ15 152 aa13.72□□□□□ -0.21
SYNE4-201ENST00000324444 CHEK1O14757 476 aa13.72□□□□□ -0.21
SYNE4-201ENST00000324444 ATP5G3P48201 142 aa13.72□□□□□ -0.21
SYNE4-201ENST00000324444 CCDC28AQ8IWP9 274 aa13.72□□□□□ -0.21
SYNE4-201ENST00000324444 C11orf44Q8N8P7 122 aa13.72□□□□□ -0.21
SYNE4-201ENST00000324444 C5orf17Q8NAS9 161 aa13.72□□□□□ -0.21
SYNE4-201ENST00000324444 CMTM2Q8TAZ6 248 aa13.72□□□□□ -0.21
SYNE4-201ENST00000324444 PRELID1Q9Y255 219 aa13.72□□□□□ -0.21
SYNE4-201ENST00000324444 PGPA6NDG6 321 aa13.71□□□□□ -0.21
SYNE4-201ENST00000324444 S100A9P06702 114 aaKnown RBP13.71□□□□□ -0.21
SYNE4-201ENST00000324444 CSN1S1P47710 185 aa13.71□□□□□ -0.21
SYNE4-201ENST00000324444 C18orf65Q6ZTR6 163 aa13.71□□□□□ -0.21
SYNE4-201ENST00000324444 OR9G4Q8NGQ1 327 aa13.71□□□□□ -0.21
SYNE4-201ENST00000324444 C11orf52Q96A22 123 aa13.71□□□□□ -0.21
SYNE4-201ENST00000324444 Q9H3A6 140 aa13.71□□□□□ -0.21
SYNE4-201ENST00000324444 SERTM2A0A1B0GWG4 89 aa13.71□□□□□ -0.22
SYNE4-201ENST00000324444 A0A1W2PRX2 142 aa13.71□□□□□ -0.22
SYNE4-201ENST00000324444 TMEM213A2RRL7 107 aa13.71□□□□□ -0.22
SYNE4-201ENST00000324444 C9JQL5 133 aa13.71□□□□□ -0.22
SYNE4-201ENST00000324444 K7EQM0 130 aa13.71□□□□□ -0.22
SYNE4-201ENST00000324444 APOHP02749 345 aaPredicted RBP13.71□□□□□ -0.22
SYNE4-201ENST00000324444 CBLN1P23435 193 aa13.71□□□□□ -0.22
SYNE4-201ENST00000324444 SLURP1P55000 103 aa13.71□□□□□ -0.22
SYNE4-201ENST00000324444 DEFB136Q30KP8 78 aa13.71□□□□□ -0.22
SYNE4-201ENST00000324444 C10orf91Q5T1B1 145 aa13.71□□□□□ -0.22
SYNE4-201ENST00000324444 CYB561D1Q8N8Q1 229 aa13.71□□□□□ -0.22
SYNE4-201ENST00000324444 RAX2Q96IS3 184 aa13.71□□□□□ -0.22
SYNE4-201ENST00000324444 CARHSP1Q9Y2V2 147 aaKnown RBP13.71□□□□□ -0.22
SYNE4-201ENST00000324444 IGHV3-66A0A0C4DH42 116 aa13.7□□□□□ -0.22
SYNE4-201ENST00000324444 C2orf70A6NJV1 201 aa13.7□□□□□ -0.22
SYNE4-201ENST00000324444 GGTLC3B5MD39 225 aa13.7□□□□□ -0.22
SYNE4-201ENST00000324444 SLC25A5P05141 298 aaKnown RBP13.7□□□□□ -0.22
SYNE4-201ENST00000324444 CEBPGP53567 150 aa13.7□□□□□ -0.22
SYNE4-201ENST00000324444 NIPSNAP3BQ9BS92 247 aa13.7□□□□□ -0.22
SYNE4-201ENST00000324444 EPDR1Q9UM22 224 aa13.7□□□□□ -0.22
SYNE4-201ENST00000324444 SMAD5-AS1Q9Y6J3 95 aa13.7□□□□□ -0.22
SYNE4-201ENST00000324444 IGHV3-49A0A0A0MS15 119 aa13.69□□□□□ -0.22
SYNE4-201ENST00000324444 FBLL1A6NHQ2 334 aaKnown RBP13.69□□□□□ -0.22
SYNE4-201ENST00000324444 ADARB2-AS1A8MUL3 147 aa13.69□□□□□ -0.22
SYNE4-201ENST00000324444 PAFAH1B2P68402 229 aa13.69□□□□□ -0.22
SYNE4-201ENST00000324444 HIST2H2BDQ6DRA6 164 aa13.69□□□□□ -0.22
SYNE4-201ENST00000324444 SVBPQ8N300 66 aa13.69□□□□□ -0.22
SYNE4-201ENST00000324444 LINC00052Q96N35 136 aa13.69□□□□□ -0.22
SYNE4-201ENST00000324444 NRN1Q9NPD7 142 aa13.69□□□□□ -0.22
SYNE4-201ENST00000324444 ZNF331Q9NQX6 463 aaPredicted RBP13.69□□□□□ -0.22
SYNE4-201ENST00000324444 SIGLEC8Q9NYZ4 499 aa13.69□□□□□ -0.22
SYNE4-201ENST00000324444 IGHV3OR16-13A0A075B7E8 117 aa13.68□□□□□ -0.22
SYNE4-201ENST00000324444 IGHV3-74A0A0B4J1X5 117 aa13.68□□□□□ -0.22
SYNE4-201ENST00000324444 ZNF727A8MUV8 499 aa13.68□□□□□ -0.22
SYNE4-201ENST00000324444 NDUFB4O95168 129 aa13.68□□□□□ -0.22
SYNE4-201ENST00000324444 FOLR2P14207 255 aa13.68□□□□□ -0.22
SYNE4-201ENST00000324444 CNN1P51911 297 aaKnown RBP13.68□□□□□ -0.22
SYNE4-201ENST00000324444 RPL11P62913 178 aaKnown RBP13.68□□□□□ -0.22
SYNE4-201ENST00000324444 DEFA6Q01524 100 aa13.68□□□□□ -0.22
SYNE4-201ENST00000324444 PNRC1Q12796 327 aaPredicted RBP13.68□□□□□ -0.22
SYNE4-201ENST00000324444 TCF24Q7RTU0 167 aa13.68□□□□□ -0.22
SYNE4-201ENST00000324444 DLX4Q92988 240 aaPredicted RBP13.68□□□□□ -0.22
SYNE4-201ENST00000324444 MRPL53Q96EL3 112 aaKnown RBP13.68□□□□□ -0.22
SYNE4-201ENST00000324444 ATG101Q9BSB4 218 aa13.68□□□□□ -0.22
SYNE4-201ENST00000324444 PEX7O00628 323 aa13.67□□□□□ -0.22
SYNE4-201ENST00000324444 OVOL1O14753 267 aa13.67□□□□□ -0.22
SYNE4-201ENST00000324444 ID1P41134 155 aa13.67□□□□□ -0.22
SYNE4-201ENST00000324444 AKR1C3P42330 323 aa13.67□□□□□ -0.22
SYNE4-201ENST00000324444 TAS2R60P59551 318 aa13.67□□□□□ -0.22
SYNE4-201ENST00000324444 NSUN5P1Q3KNT7 163 aa13.67□□□□□ -0.22
SYNE4-201ENST00000324444 FAM90A2PQ658T7 463 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms