RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 MYOZ3Q8TDC0 251 aa13.73□□□□□ -0.21
RAB39A-201ENST00000320578 BIN3Q9NQY0 253 aa13.73□□□□□ -0.21
RAB39A-201ENST00000320578 LOC105371267A0A1B0GV96 52 aa13.72□□□□□ -0.21
RAB39A-201ENST00000320578 K7EQM0 130 aa13.72□□□□□ -0.21
RAB39A-201ENST00000320578 LTAP01374 205 aa13.72□□□□□ -0.21
RAB39A-201ENST00000320578 HNF1AP20823 631 aa13.72□□□□□ -0.21
RAB39A-201ENST00000320578 RPL15P61313 204 aaKnown RBP13.72□□□□□ -0.21
RAB39A-201ENST00000320578 SCGB2A2Q13296 93 aa13.72□□□□□ -0.21
RAB39A-201ENST00000320578 TMEM95Q3KNT9 176 aa13.72□□□□□ -0.21
RAB39A-201ENST00000320578 TMEM75Q8N9X5 138 aa13.72□□□□□ -0.21
RAB39A-201ENST00000320578 MLST8Q9BVC4 326 aa13.72□□□□□ -0.21
RAB39A-201ENST00000320578 CELSR1Q9NYQ6 3014 aa13.72□□□□□ -0.21
RAB39A-201ENST00000320578 FBLL1A6NHQ2 334 aaKnown RBP13.71□□□□□ -0.21
RAB39A-201ENST00000320578 SLC17A3O00476 420 aa13.71□□□□□ -0.21
RAB39A-201ENST00000320578 ERVFC1-1P60608 527 aa13.71□□□□□ -0.21
RAB39A-201ENST00000320578 PEF1Q9UBV8 284 aaKnown RBP13.71□□□□□ -0.21
RAB39A-201ENST00000320578 TRAV34A0A0B4J273 112 aa13.71□□□□□ -0.22
RAB39A-201ENST00000320578 TRBV12-3P01733 135 aa13.71□□□□□ -0.22
RAB39A-201ENST00000320578 TYMSP04818 313 aa13.71□□□□□ -0.22
RAB39A-201ENST00000320578 IL36BQ9NZH7 164 aa13.71□□□□□ -0.22
RAB39A-201ENST00000320578 V9GYV3 84 aa13.71□□□□□ -0.22
RAB39A-201ENST00000320578 IGHV3-11P01762 117 aa13.7□□□□□ -0.22
RAB39A-201ENST00000320578 RPS10P46783 165 aaKnown RBP13.7□□□□□ -0.22
RAB39A-201ENST00000320578 CSN1S1P47710 185 aa13.7□□□□□ -0.22
RAB39A-201ENST00000320578 OR5I1Q13606 314 aa13.7□□□□□ -0.22
RAB39A-201ENST00000320578 C16orf54Q6UWD8 224 aa13.7□□□□□ -0.22
RAB39A-201ENST00000320578 SLC50A1Q9BRV3 221 aa13.7□□□□□ -0.22
RAB39A-201ENST00000320578 SRD5A3Q9H8P0 318 aa13.7□□□□□ -0.22
RAB39A-201ENST00000320578 DIRC3C9JPN6 131 aa13.69□□□□□ -0.22
RAB39A-201ENST00000320578 IGLV2-11P01706 119 aa13.69□□□□□ -0.22
RAB39A-201ENST00000320578 GPHB5Q86YW7 130 aa13.69□□□□□ -0.22
RAB39A-201ENST00000320578 ZNF331Q9NQX6 463 aaPredicted RBP13.69□□□□□ -0.22
RAB39A-201ENST00000320578 YAE1D1Q9NRH1 226 aa13.69□□□□□ -0.22
RAB39A-201ENST00000320578 CLEC5AQ9NY25 188 aa13.69□□□□□ -0.22
RAB39A-201ENST00000320578 ZFP30Q9Y2G7 519 aa13.69□□□□□ -0.22
RAB39A-201ENST00000320578 TEX15Q9BXT5 2789 aa13.69□□□□□ -0.22
RAB39A-201ENST00000320578 IGHV3OR16-8A0A075B7F1 116 aa13.69□□□□□ -0.22
RAB39A-201ENST00000320578 A0A1W2PS18 150 aa13.69□□□□□ -0.22
RAB39A-201ENST00000320578 K7EMT4 169 aa13.69□□□□□ -0.22
RAB39A-201ENST00000320578 MGST1P10620 155 aaKnown RBP13.69□□□□□ -0.22
RAB39A-201ENST00000320578 IBA57Q5T440 356 aaKnown RBP13.69□□□□□ -0.22
RAB39A-201ENST00000320578 GOLT1AQ6ZVE7 132 aa13.69□□□□□ -0.22
RAB39A-201ENST00000320578 IL17RELQ6ZVW7 336 aa13.69□□□□□ -0.22
RAB39A-201ENST00000320578 CCDC168Q8NDH2 2452 aa13.68□□□□□ -0.22
RAB39A-201ENST00000320578 ZNF785A8K8V0 405 aa13.68□□□□□ -0.22
RAB39A-201ENST00000320578 Q86TA4 180 aa13.68□□□□□ -0.22
RAB39A-201ENST00000320578 TMEM183AQ8IXX5 376 aa13.68□□□□□ -0.22
RAB39A-201ENST00000320578 UBE2E2Q96LR5 201 aa13.68□□□□□ -0.22
RAB39A-201ENST00000320578 ZNF492Q9P255 531 aa13.68□□□□□ -0.22
RAB39A-201ENST00000320578 RPH3ALQ9UNE2 315 aa13.68□□□□□ -0.22
RAB39A-201ENST00000320578 PSG3Q16557 428 aa13.67□□□□□ -0.22
RAB39A-201ENST00000320578 GLMPQ8WWB7 406 aa13.67□□□□□ -0.22
RAB39A-201ENST00000320578 GRAMD2BQ96HH9 432 aa13.67□□□□□ -0.22
RAB39A-201ENST00000320578 SERTAD4Q9NUC0 356 aa13.67□□□□□ -0.22
RAB39A-201ENST00000320578 GCN1Q92616 2671 aaKnown RBP13.67□□□□□ -0.22
RAB39A-201ENST00000320578 APOHP02749 345 aaPredicted RBP13.67□□□□□ -0.22
RAB39A-201ENST00000320578 FAM3BP58499 235 aaPredicted RBP13.67□□□□□ -0.22
RAB39A-201ENST00000320578 FAM106AQ4KMX7 169 aa13.67□□□□□ -0.22
RAB39A-201ENST00000320578 UNQ9165/PRO28630Q6UXU0 137 aa13.67□□□□□ -0.22
RAB39A-201ENST00000320578 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.67□□□□□ -0.22
RAB39A-201ENST00000320578 LCNL1Q6ZST4 164 aa13.67□□□□□ -0.22
RAB39A-201ENST00000320578 MRPL53Q96EL3 112 aaKnown RBP13.67□□□□□ -0.22
RAB39A-201ENST00000320578 CSMD1Q96PZ7 3565 aa13.66□□□□□ -0.22
RAB39A-201ENST00000320578 A0A1W2PPQ1 181 aa13.66□□□□□ -0.22
RAB39A-201ENST00000320578 RPEL1Q2QD12 228 aa13.66□□□□□ -0.22
RAB39A-201ENST00000320578 RNASE7Q9H1E1 156 aaKnown RBP13.66□□□□□ -0.22
RAB39A-201ENST00000320578 DNAJC9-AS1A6NH13 148 aa13.65□□□□□ -0.22
RAB39A-201ENST00000320578 LGALS1P09382 135 aaKnown RBP13.65□□□□□ -0.22
RAB39A-201ENST00000320578 PSG8Q9UQ74 426 aa13.65□□□□□ -0.22
RAB39A-201ENST00000320578 ITPR2Q14571 2701 aa13.65□□□□□ -0.22
RAB39A-201ENST00000320578 ZNF320A2RRD8 509 aa13.64□□□□□ -0.23
RAB39A-201ENST00000320578 M0R3E3 92 aa13.64□□□□□ -0.23
RAB39A-201ENST00000320578 RPLP1P05386 114 aaKnown RBP13.64□□□□□ -0.23
RAB39A-201ENST00000320578 C10orf99Q6UWK7 81 aa13.64□□□□□ -0.23
RAB39A-201ENST00000320578 COX8CQ7Z4L0 72 aa13.64□□□□□ -0.23
RAB39A-201ENST00000320578 NHLRC2Q8NBF2 726 aa13.64□□□□□ -0.23
RAB39A-201ENST00000320578 DAZ1Q9NQZ3 744 aaKnown RBP13.64□□□□□ -0.23
RAB39A-201ENST00000320578 SMIM27A0A1W2PRY6 76 aa13.64□□□□□ -0.23
RAB39A-201ENST00000320578 RBAKDNA6NC62 111 aa13.64□□□□□ -0.23
RAB39A-201ENST00000320578 ZNF207O43670 478 aaKnown RBP13.64□□□□□ -0.23
RAB39A-201ENST00000320578 GATCO43716 136 aaKnown RBP13.64□□□□□ -0.23
RAB39A-201ENST00000320578 RPL19P84098 196 aaKnown RBP13.64□□□□□ -0.23
RAB39A-201ENST00000320578 CT83Q5H943 113 aa13.64□□□□□ -0.23
RAB39A-201ENST00000320578 NUDT10Q8NFP7 164 aa13.64□□□□□ -0.23
RAB39A-201ENST00000320578 NUDT11Q96G61 164 aa13.64□□□□□ -0.23
RAB39A-201ENST00000320578 IGHV7-4-1A0A0J9YVY3 117 aa13.63□□□□□ -0.23
RAB39A-201ENST00000320578 C19orf71A6NCJ1 209 aa13.63□□□□□ -0.23
RAB39A-201ENST00000320578 ZNF705GA8MUZ8 300 aaPredicted RBP13.63□□□□□ -0.23
RAB39A-201ENST00000320578 UFC1Q9Y3C8 167 aa13.63□□□□□ -0.23
RAB39A-201ENST00000320578 FLNAP21333 2647 aaKnown RBP13.63□□□□□ -0.23
RAB39A-201ENST00000320578 TRAV8-1A0A0A6YYK1 113 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 CHEK1O14757 476 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 PHOX2AO14813 284 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 BMI1P35226 326 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 LCN12Q6JVE5 192 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 PRNTQ86SH4 94 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 WFDC12Q8WWY7 111 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 SGK494Q96LW2 274 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 MXRA5Q9NR99 2828 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 IGHV3-66A0A0C4DH42 116 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms