RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 F8W735 103 aaPredicted RBP12.47□□□□□ -0.41
SHISA2-201ENST00000319420 H3BUX3 64 aa12.47□□□□□ -0.41
SHISA2-201ENST00000319420 TCF21O43680 179 aa12.47□□□□□ -0.41
SHISA2-201ENST00000319420 CLEC3BP05452 202 aa12.47□□□□□ -0.41
SHISA2-201ENST00000319420 MSMBP08118 114 aa12.47□□□□□ -0.41
SHISA2-201ENST00000319420 EBI3Q14213 229 aa12.47□□□□□ -0.41
SHISA2-201ENST00000319420 GOLT1AQ6ZVE7 132 aa12.47□□□□□ -0.41
SHISA2-201ENST00000319420 THYN1Q9P016 225 aa12.47□□□□□ -0.41
SHISA2-201ENST00000319420 YPEL3P61236 119 aaPredicted RBP12.47□□□□□ -0.41
SHISA2-201ENST00000319420 CLEC19AQ6UXS0 136 aa12.47□□□□□ -0.41
SHISA2-201ENST00000319420 TTC9CQ8N5M4 171 aa12.47□□□□□ -0.41
SHISA2-201ENST00000319420 STXBP6Q8NFX7 210 aa12.47□□□□□ -0.41
SHISA2-201ENST00000319420 OR5R1Q8NH85 324 aa12.47□□□□□ -0.41
SHISA2-201ENST00000319420 CDC42EP3Q9UKI2 254 aa12.47□□□□□ -0.41
SHISA2-201ENST00000319420 NPIPB5A8MRT5 1133 aa12.46□□□□□ -0.41
SHISA2-201ENST00000319420 CMTM2Q8TAZ6 248 aa12.46□□□□□ -0.41
SHISA2-201ENST00000319420 MRPL18Q9H0U6 180 aaKnown RBP12.46□□□□□ -0.42
SHISA2-201ENST00000319420 OSTCQ9NRP0 149 aa12.46□□□□□ -0.42
SHISA2-201ENST00000319420 S100A7P31151 101 aa12.45□□□□□ -0.42
SHISA2-201ENST00000319420 KIAA1644Q3SXP7 199 aa12.45□□□□□ -0.42
SHISA2-201ENST00000319420 PRNTQ86SH4 94 aa12.45□□□□□ -0.42
SHISA2-201ENST00000319420 BTF3L4Q96K17 158 aa12.45□□□□□ -0.42
SHISA2-201ENST00000319420 SRSF8Q9BRL6 282 aaKnown RBP12.45□□□□□ -0.42
SHISA2-201ENST00000319420 MRPL27Q9P0M9 148 aaKnown RBP12.45□□□□□ -0.42
SHISA2-201ENST00000319420 CHTOPQ9Y3Y2 248 aaKnown RBP12.45□□□□□ -0.42
SHISA2-201ENST00000319420 M0R143 59 aa12.45□□□□□ -0.42
SHISA2-201ENST00000319420 HLA-DRB1P01911 266 aa12.45□□□□□ -0.42
SHISA2-201ENST00000319420 Q6ZS46 218 aa12.45□□□□□ -0.42
SHISA2-201ENST00000319420 TP53TG3Q9ULZ0 132 aa12.45□□□□□ -0.42
SHISA2-201ENST00000319420 SNURFLB1AK76 121 aa12.44□□□□□ -0.42
SHISA2-201ENST00000319420 F2Z2F3 143 aa12.44□□□□□ -0.42
SHISA2-201ENST00000319420 TGFAP01135 160 aa12.44□□□□□ -0.42
SHISA2-201ENST00000319420 CTSGP08311 255 aa12.44□□□□□ -0.42
SHISA2-201ENST00000319420 GZMBP10144 247 aa12.44□□□□□ -0.42
SHISA2-201ENST00000319420 BLCAPP62952 87 aa12.44□□□□□ -0.42
SHISA2-201ENST00000319420 BPIFA4PQ86YQ2 179 aa12.44□□□□□ -0.42
SHISA2-201ENST00000319420 OR4F17Q8NGA8 305 aa12.44□□□□□ -0.42
SHISA2-201ENST00000319420 RNF223E7ERA6 249 aa12.44□□□□□ -0.42
SHISA2-201ENST00000319420 TOMM40O96008 361 aa12.44□□□□□ -0.42
SHISA2-201ENST00000319420 PLP1P60201 277 aa12.44□□□□□ -0.42
SHISA2-201ENST00000319420 C5orf56Q8N8D9 126 aa12.44□□□□□ -0.42
SHISA2-201ENST00000319420 SHANK2-AS3Q9BTD1 123 aa12.44□□□□□ -0.42
SHISA2-201ENST00000319420 VWC2LB2RUY7 222 aa12.43□□□□□ -0.42
SHISA2-201ENST00000319420 CIARTQ8N365 385 aaPredicted RBP12.43□□□□□ -0.42
SHISA2-201ENST00000319420 PIFOQ8TCI5 191 aa12.43□□□□□ -0.42
SHISA2-201ENST00000319420 MTORP42345 2549 aa12.43□□□□□ -0.42
SHISA2-201ENST00000319420 IGHV3-11P01762 117 aa12.43□□□□□ -0.42
SHISA2-201ENST00000319420 TCRAP04437 139 aa12.43□□□□□ -0.42
SHISA2-201ENST00000319420 LINC00322Q6ZN03 302 aaPredicted RBP12.43□□□□□ -0.42
SHISA2-201ENST00000319420 GBGT1Q8N5D6 347 aa12.43□□□□□ -0.42
SHISA2-201ENST00000319420 NUDT10Q8NFP7 164 aa12.43□□□□□ -0.42
SHISA2-201ENST00000319420 NUDT11Q96G61 164 aa12.43□□□□□ -0.42
SHISA2-201ENST00000319420 HIST1H1EP10412 219 aaKnown RBP12.42□□□□□ -0.42
SHISA2-201ENST00000319420 LINC00310P59036 64 aa12.42□□□□□ -0.42
SHISA2-201ENST00000319420 C5orf17Q8NAS9 161 aa12.42□□□□□ -0.42
SHISA2-201ENST00000319420 RPLP1P05386 114 aaKnown RBP12.42□□□□□ -0.42
SHISA2-201ENST00000319420 CD33P20138 364 aa12.42□□□□□ -0.42
SHISA2-201ENST00000319420 TMEM95Q3KNT9 176 aa12.42□□□□□ -0.42
SHISA2-201ENST00000319420 ITPR2Q14571 2701 aa12.42□□□□□ -0.42
SHISA2-201ENST00000319420 H3BRN7 92 aa12.41□□□□□ -0.42
SHISA2-201ENST00000319420 NDUFS8O00217 210 aa12.41□□□□□ -0.42
SHISA2-201ENST00000319420 HLA-DMBP28068 263 aa12.41□□□□□ -0.42
SHISA2-201ENST00000319420 SMIM27A0A1W2PRY6 76 aa12.41□□□□□ -0.42
SHISA2-201ENST00000319420 JOSD1Q15040 202 aaPredicted RBP12.41□□□□□ -0.42
SHISA2-201ENST00000319420 FLNAP21333 2647 aaKnown RBP12.41□□□□□ -0.42
SHISA2-201ENST00000319420 TRAV9-1A0A075B6T8 112 aa12.4□□□□□ -0.42
SHISA2-201ENST00000319420 B4DSR2 109 aa12.4□□□□□ -0.42
SHISA2-201ENST00000319420 CAMPP49913 170 aa12.4□□□□□ -0.42
SHISA2-201ENST00000319420 TMEM183BQ1AE95 376 aa12.4□□□□□ -0.42
SHISA2-201ENST00000319420 NAT8BQ9UHF3 227 aa12.4□□□□□ -0.42
SHISA2-201ENST00000319420 MOB4Q9Y3A3 225 aa12.4□□□□□ -0.42
SHISA2-201ENST00000319420 TRBV19A0A075B6N1 114 aa12.4□□□□□ -0.42
SHISA2-201ENST00000319420 TMEM136Q6ZRR5 245 aa12.4□□□□□ -0.42
SHISA2-201ENST00000319420 TCF24Q7RTU0 167 aa12.4□□□□□ -0.42
SHISA2-201ENST00000319420 HECTD1Q9ULT8 2610 aa12.4□□□□□ -0.42
SHISA2-201ENST00000319420 NF1P21359 2839 aa12.4□□□□□ -0.42
SHISA2-201ENST00000319420 FAM110DQ8TAY7 271 aaPredicted RBP12.4□□□□□ -0.43
SHISA2-201ENST00000319420 MBD6Q96DN6 1003 aa12.4□□□□□ -0.43
SHISA2-201ENST00000319420 DUX5Q96PT3 197 aa12.4□□□□□ -0.43
SHISA2-201ENST00000319420 ITPR3Q14573 2671 aa12.39□□□□□ -0.43
SHISA2-201ENST00000319420 TRAV30A0A087WSZ9 112 aa12.39□□□□□ -0.43
SHISA2-201ENST00000319420 TRAV41A0A0B4J266 112 aa12.39□□□□□ -0.43
SHISA2-201ENST00000319420 TRGV3P03979 118 aa12.39□□□□□ -0.43
SHISA2-201ENST00000319420 CRISP2P16562 243 aa12.39□□□□□ -0.43
SHISA2-201ENST00000319420 TOMM20LQ6UXN7 152 aa12.39□□□□□ -0.43
SHISA2-201ENST00000319420 TMEM18Q96B42 140 aa12.39□□□□□ -0.43
SHISA2-201ENST00000319420 CCDC140Q96MF4 163 aa12.39□□□□□ -0.43
SHISA2-201ENST00000319420 GPR82Q96P67 336 aa12.39□□□□□ -0.43
SHISA2-201ENST00000319420 WI2-2373I1.2A0A1W2PRP0 233 aa12.39□□□□□ -0.43
SHISA2-201ENST00000319420 TPPP3Q9BW30 176 aa12.39□□□□□ -0.43
SHISA2-201ENST00000319420 KLF12Q9Y4X4 402 aa12.39□□□□□ -0.43
SHISA2-201ENST00000319420 FASNP49327 2511 aaKnown RBP12.38□□□□□ -0.43
SHISA2-201ENST00000319420 IGKV3-7A0A075B6H7 116 aa12.38□□□□□ -0.43
SHISA2-201ENST00000319420 ZNF705FA8MVS1 300 aaPredicted RBP12.38□□□□□ -0.43
SHISA2-201ENST00000319420 SERF1AO75920 110 aa12.38□□□□□ -0.43
SHISA2-201ENST00000319420 TRBV12-3P01733 135 aa12.38□□□□□ -0.43
SHISA2-201ENST00000319420 APOHP02749 345 aaPredicted RBP12.38□□□□□ -0.43
SHISA2-201ENST00000319420 RPL19P84098 196 aaKnown RBP12.38□□□□□ -0.43
SHISA2-201ENST00000319420 GNB1LQ9BYB4 327 aa12.38□□□□□ -0.43
SHISA2-201ENST00000319420 IGKV2-40A0A087WW87 121 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms