RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 RP1P56715 2156 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 LOC107984156A0A0G2JMH3 177 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 M0R2P5 195 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 HOXA3O43365 443 aaPredicted RBP5.29□□□□□ -1.56
ZNF540-201ENST00000316433 ACTL6BO94805 426 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 CECR9P0C854 216 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 HLA-DRB4P13762 266 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 ARL17AQ8IVW1 177 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 C3orf22Q8N5N4 141 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 IFI27L1Q96BM0 104 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 PGLYRP4Q96LB8 373 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 GFRA4Q9GZZ7 299 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 HLA-DRB4X5D2U9 266 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 PRRC2BQ5JSZ5 2229 aaKnown RBP5.28□□□□□ -1.56
ZNF540-201ENST00000316433 SHISA9B4DS77 424 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 C12orf77C9JDV5 145 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 H3BVH4 76 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 GFRA3O60609 400 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 LHBP01229 141 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 SCGB1C2P0DMR2 95 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 FCER1GP30273 86 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 KLF17Q5JT82 389 aaPredicted RBP5.28□□□□□ -1.56
ZNF540-201ENST00000316433 SIGLEC15Q6ZMC9 328 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 ODF3Q96PU9 254 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 ZNF492Q9P255 531 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 EPDR1Q9UM22 224 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 PDE4DIPQ5VU43 2346 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 ZNF503-AS2A6NEH8 195 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 IGFBP4P22692 258 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 MYCNOSP40205 109 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 HRCT1Q6UXD1 115 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 ZFP2Q6ZN57 461 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 TRPT1Q86TN4 253 aaKnown RBP5.28□□□□□ -1.56
ZNF540-201ENST00000316433 LINC00311Q8N616 119 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 THAP8Q8NA92 274 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 RITA1Q96K30 269 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 C7orf69Q9H7B7 122 aa5.28□□□□□ -1.56
ZNF540-201ENST00000316433 KLK5Q9Y337 293 aaPredicted RBP5.28□□□□□ -1.56
ZNF540-201ENST00000316433 RAI1Q7Z5J4 1906 aaPredicted RBP5.28□□□□□ -1.56
ZNF540-201ENST00000316433 HOXB4P17483 251 aaPredicted RBP5.27□□□□□ -1.57
ZNF540-201ENST00000316433 EDN2P20800 178 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 UBE2D3P61077 147 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 UBE2D2P62837 147 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 LOXL1Q08397 574 aaPredicted RBP5.27□□□□□ -1.57
ZNF540-201ENST00000316433 FOXC1Q12948 553 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 C4orf26Q17RF5 130 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 RSPO4Q2I0M5 234 aaPredicted RBP5.27□□□□□ -1.57
ZNF540-201ENST00000316433 ZC2HC1BQ5TFG8 222 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 COX8CQ7Z4L0 72 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 RNF152Q8N8N0 203 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 FAM57AQ8TBR7 257 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 HS3ST6Q96QI5 342 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 RPP21Q9H633 154 aaKnown RBP5.27□□□□□ -1.57
ZNF540-201ENST00000316433 TRBV7-3A0A075B6L6 115 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 MYMXA0A1B0GTQ4 84 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 SRRM5B3KS81 715 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 HSPB6O14558 160 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 HBDP02042 147 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 LOXL3P58215 753 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 KLK9Q2XQG4 91 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 RFESDQ8TAC1 157 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 TTTY12Q9BZ98 90 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 KLK9Q9UKQ9 250 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 HHLA3Q9XRX5 114 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 MKI67P46013 3256 aaKnown RBP5.27□□□□□ -1.57
ZNF540-201ENST00000316433 IGHV3-15A0A0B4J1V0 119 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 UQCRQO14949 82 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 CRYGDP07320 174 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 CD7P09564 240 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 RFPL3SP0C7P2 107 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 C8orf88P0DMB2 117 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 IFI27P40305 119 aaPredicted RBP5.27□□□□□ -1.57
ZNF540-201ENST00000316433 EDDM3AQ14507 147 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 Q6ZT83 130 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 ZNF503Q96F45 646 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 TIMD4Q96H15 378 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 ZNF576Q9H609 170 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 PRNDQ9UKY0 176 aa5.27□□□□□ -1.57
ZNF540-201ENST00000316433 AMMECR1Q9Y4X0 333 aaPredicted RBP5.27□□□□□ -1.57
ZNF540-201ENST00000316433 TRAV2A0A0B4J234 112 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 TRAV8-4A0A0B4J246 113 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 PINLYPA6NC86 204 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 RS1O15537 224 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 TCL1BO95988 128 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 HSPE1P61604 102 aaKnown RBP5.26□□□□□ -1.57
ZNF540-201ENST00000316433 ZNF816Q0VGE8 651 aaPredicted RBP5.26□□□□□ -1.57
ZNF540-201ENST00000316433 TDHQ8IZJ6 230 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 LINC00526Q96FQ7 95 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 ZMAT4Q9H898 229 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 WI2-2373I1.2A0A1W2PRP0 233 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 RBAKDNA6NC62 111 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 LINC01549A6NIU2 74 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 HAX1O00165 279 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 NGFP01138 241 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 DLX6P56179 175 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 PRCDQ00LT1 54 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 SFTA2Q6UW10 78 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 GTSCR1Q86UQ5 136 aa5.26□□□□□ -1.57
ZNF540-201ENST00000316433 ZNF784Q8NCA9 323 aaPredicted RBP5.26□□□□□ -1.57
ZNF540-201ENST00000316433 NPIPB3Q92617 1050 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms