RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 TRAV34A0A0B4J273 112 aa18.18■□□□□ 0.5
SNCB-201ENST00000310112 RPL15P61313 204 aaKnown RBP18.18■□□□□ 0.5
SNCB-201ENST00000310112 RPL19P84098 196 aaKnown RBP18.18■□□□□ 0.5
SNCB-201ENST00000310112 IBA57Q5T440 356 aaKnown RBP18.18■□□□□ 0.5
SNCB-201ENST00000310112 MLST8Q9BVC4 326 aa18.18■□□□□ 0.5
SNCB-201ENST00000310112 CLEC5AQ9NY25 188 aa18.18■□□□□ 0.5
SNCB-201ENST00000310112 PEF1Q9UBV8 284 aaKnown RBP18.18■□□□□ 0.5
SNCB-201ENST00000310112 RPH3ALQ9UNE2 315 aa18.18■□□□□ 0.5
SNCB-201ENST00000310112 V9GYV3 84 aa18.18■□□□□ 0.5
SNCB-201ENST00000310112 TENM4Q6N022 2769 aa18.18■□□□□ 0.5
SNCB-201ENST00000310112 OR5I1Q13606 314 aa18.17■□□□□ 0.5
SNCB-201ENST00000310112 RPEL1Q2QD12 228 aa18.17■□□□□ 0.5
SNCB-201ENST00000310112 TMEM160Q9NX00 188 aa18.17■□□□□ 0.5
SNCB-201ENST00000310112 ZFP30Q9Y2G7 519 aa18.17■□□□□ 0.5
SNCB-201ENST00000310112 SMAD5-AS1Q9Y6J3 95 aa18.17■□□□□ 0.5
SNCB-201ENST00000310112 A0A1W2PPQ1 181 aa18.17■□□□□ 0.5
SNCB-201ENST00000310112 A0A1W2PS18 150 aa18.17■□□□□ 0.5
SNCB-201ENST00000310112 ZNF785A8K8V0 405 aa18.17■□□□□ 0.5
SNCB-201ENST00000310112 DIRC3C9JPN6 131 aa18.17■□□□□ 0.5
SNCB-201ENST00000310112 SLC17A3O00476 420 aa18.17■□□□□ 0.5
SNCB-201ENST00000310112 FAM3BP58499 235 aaPredicted RBP18.17■□□□□ 0.5
SNCB-201ENST00000310112 KRTAP1-1Q07627 177 aa18.17■□□□□ 0.5
SNCB-201ENST00000310112 GOLT1AQ6ZVE7 132 aa18.17■□□□□ 0.5
SNCB-201ENST00000310112 RNF152Q8N8N0 203 aa18.17■□□□□ 0.5
SNCB-201ENST00000310112 GRAMD2BQ96HH9 432 aa18.17■□□□□ 0.5
SNCB-201ENST00000310112 ZNF492Q9P255 531 aa18.17■□□□□ 0.5
SNCB-201ENST00000310112 TMEM95Q3KNT9 176 aa18.16■□□□□ 0.5
SNCB-201ENST00000310112 C16orf54Q6UWD8 224 aa18.16■□□□□ 0.5
SNCB-201ENST00000310112 Q86TA4 180 aa18.16■□□□□ 0.5
SNCB-201ENST00000310112 TMEM183AQ8IXX5 376 aa18.16■□□□□ 0.5
SNCB-201ENST00000310112 MYOZ3Q8TDC0 251 aa18.16■□□□□ 0.5
SNCB-201ENST00000310112 IGHV3-11P01762 117 aa18.15■□□□□ 0.5
SNCB-201ENST00000310112 PSG3Q16557 428 aa18.15■□□□□ 0.5
SNCB-201ENST00000310112 ZNF331Q9NQX6 463 aaPredicted RBP18.15■□□□□ 0.5
SNCB-201ENST00000310112 K7EMT4 169 aa18.14■□□□□ 0.49
SNCB-201ENST00000310112 FAM106AQ4KMX7 169 aa18.14■□□□□ 0.49
SNCB-201ENST00000310112 GPHB5Q86YW7 130 aa18.14■□□□□ 0.49
SNCB-201ENST00000310112 MRPL53Q96EL3 112 aaKnown RBP18.14■□□□□ 0.49
SNCB-201ENST00000310112 YAE1D1Q9NRH1 226 aa18.14■□□□□ 0.49
SNCB-201ENST00000310112 IGHV3OR16-8A0A075B7F1 116 aa18.13■□□□□ 0.49
SNCB-201ENST00000310112 GATCO43716 136 aaKnown RBP18.13■□□□□ 0.49
SNCB-201ENST00000310112 IGLV2-11P01706 119 aa18.13■□□□□ 0.49
SNCB-201ENST00000310112 TRBV12-3P01733 135 aa18.13■□□□□ 0.49
SNCB-201ENST00000310112 CENPEQ02224 2701 aa18.13■□□□□ 0.49
SNCB-201ENST00000310112 S100A6P06703 90 aa18.12■□□□□ 0.49
SNCB-201ENST00000310112 COX19Q49B96 90 aa18.12■□□□□ 0.49
SNCB-201ENST00000310112 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.12■□□□□ 0.49
SNCB-201ENST00000310112 GLMPQ8WWB7 406 aa18.12■□□□□ 0.49
SNCB-201ENST00000310112 RNASE7Q9H1E1 156 aaKnown RBP18.12■□□□□ 0.49
SNCB-201ENST00000310112 PSG8Q9UQ74 426 aa18.12■□□□□ 0.49
SNCB-201ENST00000310112 ZNF705GA8MUZ8 300 aaPredicted RBP18.11■□□□□ 0.49
SNCB-201ENST00000310112 BMI1P35226 326 aa18.11■□□□□ 0.49
SNCB-201ENST00000310112 CT83Q5H943 113 aa18.11■□□□□ 0.49
SNCB-201ENST00000310112 ZFP82Q8N141 532 aa18.11■□□□□ 0.49
SNCB-201ENST00000310112 UBE2E2Q96LR5 201 aa18.11■□□□□ 0.49
SNCB-201ENST00000310112 HELZ2Q9BYK8 2649 aaKnown RBP18.1■□□□□ 0.49
SNCB-201ENST00000310112 ZNF320A2RRD8 509 aa18.1■□□□□ 0.49
SNCB-201ENST00000310112 IL17RELQ6ZVW7 336 aa18.1■□□□□ 0.49
SNCB-201ENST00000310112 NHLRC2Q8NBF2 726 aa18.1■□□□□ 0.49
SNCB-201ENST00000310112 SMIM27A0A1W2PRY6 76 aa18.09■□□□□ 0.49
SNCB-201ENST00000310112 RBAKDNA6NC62 111 aa18.09■□□□□ 0.49
SNCB-201ENST00000310112 TRGC2P03986 189 aa18.09■□□□□ 0.49
SNCB-201ENST00000310112 LGALS1P09382 135 aaKnown RBP18.09■□□□□ 0.49
SNCB-201ENST00000310112 PRNTQ86SH4 94 aa18.09■□□□□ 0.49
SNCB-201ENST00000310112 NUDT10Q8NFP7 164 aa18.09■□□□□ 0.49
SNCB-201ENST00000310112 OR4B1Q8NGF8 309 aa18.09■□□□□ 0.49
SNCB-201ENST00000310112 DAZAP1Q96EP5 407 aaKnown RBP18.09■□□□□ 0.49
SNCB-201ENST00000310112 NUDT11Q96G61 164 aa18.09■□□□□ 0.49
SNCB-201ENST00000310112 DAZ1Q9NQZ3 744 aaKnown RBP18.09■□□□□ 0.49
SNCB-201ENST00000310112 SERTAD4Q9NUC0 356 aa18.09■□□□□ 0.49
SNCB-201ENST00000310112 UFC1Q9Y3C8 167 aa18.09■□□□□ 0.49
SNCB-201ENST00000310112 M0R3E3 92 aa18.08■□□□□ 0.49
SNCB-201ENST00000310112 ZNF207O43670 478 aaKnown RBP18.08■□□□□ 0.49
SNCB-201ENST00000310112 APOHP02749 345 aaPredicted RBP18.08■□□□□ 0.49
SNCB-201ENST00000310112 SAPCD1Q5SSQ6 148 aa18.08■□□□□ 0.49
SNCB-201ENST00000310112 UNQ9165/PRO28630Q6UXU0 137 aa18.08■□□□□ 0.49
SNCB-201ENST00000310112 LCNL1Q6ZST4 164 aa18.08■□□□□ 0.49
SNCB-201ENST00000310112 C19orf71A6NCJ1 209 aa18.07■□□□□ 0.48
SNCB-201ENST00000310112 CHEK1O14757 476 aa18.07■□□□□ 0.48
SNCB-201ENST00000310112 COX8CQ7Z4L0 72 aa18.07■□□□□ 0.48
SNCB-201ENST00000310112 TRAV8-1A0A0A6YYK1 113 aa18.06■□□□□ 0.48
SNCB-201ENST00000310112 IGHV7-4-1A0A0J9YVY3 117 aa18.06■□□□□ 0.48
SNCB-201ENST00000310112 DNAJC9-AS1A6NH13 148 aa18.06■□□□□ 0.48
SNCB-201ENST00000310112 RPLP1P05386 114 aaKnown RBP18.06■□□□□ 0.48
SNCB-201ENST00000310112 SAMD13Q5VXD3 122 aa18.06■□□□□ 0.48
SNCB-201ENST00000310112 LCN12Q6JVE5 192 aa18.06■□□□□ 0.48
SNCB-201ENST00000310112 PRR27Q6MZM9 219 aa18.06■□□□□ 0.48
SNCB-201ENST00000310112 GBGT1Q8N5D6 347 aa18.06■□□□□ 0.48
SNCB-201ENST00000310112 SGK494Q96LW2 274 aa18.06■□□□□ 0.48
SNCB-201ENST00000310112 VPS13CQ709C8 3753 aa18.06■□□□□ 0.48
SNCB-201ENST00000310112 PHOX2AO14813 284 aa18.05■□□□□ 0.48
SNCB-201ENST00000310112 P01737 135 aa18.05■□□□□ 0.48
SNCB-201ENST00000310112 TSKUQ8WUA8 353 aa18.05■□□□□ 0.48
SNCB-201ENST00000310112 RPP21Q9H633 154 aaKnown RBP18.05■□□□□ 0.48
SNCB-201ENST00000310112 IGHV3-66A0A0C4DH42 116 aa18.04■□□□□ 0.48
SNCB-201ENST00000310112 FAM231BA6NCW3 169 aa18.04■□□□□ 0.48
SNCB-201ENST00000310112 IZUMO1RA6ND01 250 aa18.04■□□□□ 0.48
SNCB-201ENST00000310112 A8MWL6 223 aa18.04■□□□□ 0.48
SNCB-201ENST00000310112 NPIPB6E9PJ23 425 aa18.04■□□□□ 0.48
SNCB-201ENST00000310112 ACTL10Q5JWF8 245 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms