RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 PRB4P10163 310 aaPredicted RBP15.59■□□□□ 0.09
TSR1-201ENST00000301364 TMEM75Q8N9X5 138 aa15.59■□□□□ 0.09
TSR1-201ENST00000301364 LINC00477Q96M19 166 aa15.59■□□□□ 0.09
TSR1-201ENST00000301364 TRAV40A0A0B4J280 105 aa15.59■□□□□ 0.09
TSR1-201ENST00000301364 DNAL4O96015 105 aa15.59■□□□□ 0.09
TSR1-201ENST00000301364 ZNF562Q6V9R5 426 aa15.59■□□□□ 0.09
TSR1-201ENST00000301364 ITLN2Q8WWU7 325 aaPredicted RBP15.59■□□□□ 0.09
TSR1-201ENST00000301364 LINC01587Q99440 93 aa15.59■□□□□ 0.09
TSR1-201ENST00000301364 JMJD8Q96S16 334 aa15.58■□□□□ 0.09
TSR1-201ENST00000301364 COL4A3Q01955 1670 aa15.58■□□□□ 0.08
TSR1-201ENST00000301364 VWC2Q2TAL6 325 aa15.58■□□□□ 0.08
TSR1-201ENST00000301364 AMN1Q8IY45 258 aa15.58■□□□□ 0.08
TSR1-201ENST00000301364 SNHG12Q9BXW3 62 aa15.58■□□□□ 0.08
TSR1-201ENST00000301364 TRGV11A0A075B6L2 103 aa15.57■□□□□ 0.08
TSR1-201ENST00000301364 A0A087X0K7 114 aa15.57■□□□□ 0.08
TSR1-201ENST00000301364 SMIM27A0A1W2PRY6 76 aa15.57■□□□□ 0.08
TSR1-201ENST00000301364 ARMS2P0C7Q2 107 aa15.57■□□□□ 0.08
TSR1-201ENST00000301364 CEACAM8P31997 349 aaPredicted RBP15.57■□□□□ 0.08
TSR1-201ENST00000301364 PRR20EP86478 221 aa15.57■□□□□ 0.08
TSR1-201ENST00000301364 PRR20CP86479 221 aa15.57■□□□□ 0.08
TSR1-201ENST00000301364 PRR20DP86480 221 aa15.57■□□□□ 0.08
TSR1-201ENST00000301364 PRR20BP86481 221 aa15.57■□□□□ 0.08
TSR1-201ENST00000301364 PRR20AP86496 221 aa15.57■□□□□ 0.08
TSR1-201ENST00000301364 BCL6BQ8N143 479 aaPredicted RBP15.57■□□□□ 0.08
TSR1-201ENST00000301364 LINC00527Q9UJ94 153 aa15.57■□□□□ 0.08
TSR1-201ENST00000301364 GTSCR1Q86UQ5 136 aa15.57■□□□□ 0.08
TSR1-201ENST00000301364 CADP27708 2225 aa15.56■□□□□ 0.08
TSR1-201ENST00000301364 DTX1Q86Y01 620 aa15.56■□□□□ 0.08
TSR1-201ENST00000301364 PLNP26678 52 aa15.56■□□□□ 0.08
TSR1-201ENST00000301364 Q6ZWC4 215 aa15.56■□□□□ 0.08
TSR1-201ENST00000301364 HAX1O00165 279 aa15.56■□□□□ 0.08
TSR1-201ENST00000301364 CD5LO43866 347 aa15.56■□□□□ 0.08
TSR1-201ENST00000301364 DPH3P1Q9H4G8 78 aa15.56■□□□□ 0.08
TSR1-201ENST00000301364 WT1-ASQ06250 92 aa15.55■□□□□ 0.08
TSR1-201ENST00000301364 FGF23Q9GZV9 251 aaPredicted RBP15.55■□□□□ 0.08
TSR1-201ENST00000301364 TRBV19A0A075B6N1 114 aa15.55■□□□□ 0.08
TSR1-201ENST00000301364 IGKV3OR2-268A0A0C4DH90 116 aa15.54■□□□□ 0.08
TSR1-201ENST00000301364 LOXP28300 417 aaPredicted RBP15.54■□□□□ 0.08
TSR1-201ENST00000301364 DUX4L9Q6RFH8 374 aaPredicted RBP15.54■□□□□ 0.08
TSR1-201ENST00000301364 PLA2G2EQ9NZK7 142 aa15.54■□□□□ 0.08
TSR1-201ENST00000301364 KIAA1671Q9BY89 1806 aa15.54■□□□□ 0.08
TSR1-201ENST00000301364 NDUFB8O95169 186 aa15.54■□□□□ 0.08
TSR1-201ENST00000301364 IGLC2P0DOY2 106 aa15.53■□□□□ 0.08
TSR1-201ENST00000301364 IGLC3P0DOY3 106 aa15.53■□□□□ 0.08
TSR1-201ENST00000301364 USMG5Q96IX5 58 aa15.53■□□□□ 0.08
TSR1-201ENST00000301364 PYGO2Q9BRQ0 406 aa15.53■□□□□ 0.08
TSR1-201ENST00000301364 PLA2G2CQ5R387 149 aa15.53■□□□□ 0.08
TSR1-201ENST00000301364 TMEM219Q86XT9 240 aa15.53■□□□□ 0.08
TSR1-201ENST00000301364 TMEM14CQ9P0S9 112 aa15.53■□□□□ 0.08
TSR1-201ENST00000301364 YLPM1P49750 1951 aaKnown RBP15.53■□□□□ 0.08
TSR1-201ENST00000301364 CD300EQ496F6 205 aaPredicted RBP15.53■□□□□ 0.08
TSR1-201ENST00000301364 COA6Q5JTJ3 125 aaKnown RBP15.53■□□□□ 0.08
TSR1-201ENST00000301364 COL6A6A6NMZ7 2263 aa15.53■□□□□ 0.08
TSR1-201ENST00000301364 SLAQ13239 276 aa15.53■□□□□ 0.08
TSR1-201ENST00000301364 TMEM158Q8WZ71 300 aa15.53■□□□□ 0.08
TSR1-201ENST00000301364 MMP23AO75900 390 aa15.52■□□□□ 0.08
TSR1-201ENST00000301364 EMP1P54849 157 aa15.52■□□□□ 0.08
TSR1-201ENST00000301364 C11orf53Q8IXP5 236 aa15.52■□□□□ 0.08
TSR1-201ENST00000301364 RNF182Q8N6D2 247 aa15.52■□□□□ 0.08
TSR1-201ENST00000301364 COX11Q9Y6N1 276 aa15.52■□□□□ 0.08
TSR1-201ENST00000301364 FXYD7P58549 80 aa15.52■□□□□ 0.08
TSR1-201ENST00000301364 THAP8Q8NA92 274 aa15.52■□□□□ 0.08
TSR1-201ENST00000301364 FAM223BA6NKX1 122 aa15.52■□□□□ 0.07
TSR1-201ENST00000301364 ZC2HC1BQ5TFG8 222 aa15.52■□□□□ 0.07
TSR1-201ENST00000301364 FAM223AQ8IWN6 122 aa15.52■□□□□ 0.07
TSR1-201ENST00000301364 SCGB1A1P11684 91 aa15.52■□□□□ 0.07
TSR1-201ENST00000301364 GAGE13Q4V321 117 aa15.51■□□□□ 0.07
TSR1-201ENST00000301364 FAM104BQ5XKR9 115 aa15.51■□□□□ 0.07
TSR1-201ENST00000301364 IGFL4Q6B9Z1 124 aa15.51■□□□□ 0.07
TSR1-201ENST00000301364 ZNF106Q9H2Y7 1883 aaKnown RBP15.51■□□□□ 0.07
TSR1-201ENST00000301364 PRSS46E5RG02 174 aa15.51■□□□□ 0.07
TSR1-201ENST00000301364 OR13C6PQ8NH95 151 aa15.51■□□□□ 0.07
TSR1-201ENST00000301364 SPTAN1Q13813 2472 aaKnown RBP15.51■□□□□ 0.07
TSR1-201ENST00000301364 SRRM4A7MD48 611 aaKnown RBP15.5■□□□□ 0.07
TSR1-201ENST00000301364 YAE1D1Q9NRH1 226 aa15.5■□□□□ 0.07
TSR1-201ENST00000301364 CNTFRP26992 372 aa15.5■□□□□ 0.07
TSR1-201ENST00000301364 DSCR9P59020 149 aa15.5■□□□□ 0.07
TSR1-201ENST00000301364 DOCK10Q96BY6 2186 aa15.5■□□□□ 0.07
TSR1-201ENST00000301364 SMAD7O15105 426 aaKnown RBP15.5■□□□□ 0.07
TSR1-201ENST00000301364 LSM4Q9Y4Z0 139 aaKnown RBP15.5■□□□□ 0.07
TSR1-201ENST00000301364 VCYO14598 125 aa15.5■□□□□ 0.07
TSR1-201ENST00000301364 CD28P10747 220 aa15.5■□□□□ 0.07
TSR1-201ENST00000301364 SMKR1H3BMG3 65 aa15.49■□□□□ 0.07
TSR1-201ENST00000301364 NDPQ00604 133 aa15.49■□□□□ 0.07
TSR1-201ENST00000301364 SFTA2Q6UW10 78 aa15.49■□□□□ 0.07
TSR1-201ENST00000301364 FXYD5Q96DB9 178 aa15.49■□□□□ 0.07
TSR1-201ENST00000301364 TNFRSF6BO95407 300 aa15.49■□□□□ 0.07
TSR1-201ENST00000301364 SRD5A1P18405 259 aa15.49■□□□□ 0.07
TSR1-201ENST00000301364 SIGMAR1Q99720 223 aa15.49■□□□□ 0.07
TSR1-201ENST00000301364 MCRIP2Q9BUT9 160 aaKnown RBP15.49■□□□□ 0.07
TSR1-201ENST00000301364 PCNX1Q96RV3 2341 aa15.49■□□□□ 0.07
TSR1-201ENST00000301364 USF3Q68DE3 2245 aa15.49■□□□□ 0.07
TSR1-201ENST00000301364 KIR3DS1Q14943 382 aa15.48■□□□□ 0.07
TSR1-201ENST00000301364 FAM110DQ8TAY7 271 aaPredicted RBP15.48■□□□□ 0.07
TSR1-201ENST00000301364 ABCA1O95477 2261 aa15.48■□□□□ 0.07
TSR1-201ENST00000301364 TMEM8BA6NDV4 472 aa15.48■□□□□ 0.07
TSR1-201ENST00000301364 TMEM262E9PQX1 116 aa15.48■□□□□ 0.07
TSR1-201ENST00000301364 LY6HO94772 140 aa15.48■□□□□ 0.07
TSR1-201ENST00000301364 TRAV2A0A0B4J234 112 aa15.48■□□□□ 0.07
TSR1-201ENST00000301364 KAAG1Q9UBP8 84 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms