RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 LHFPL6Q9Y693 200 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 TRBV7-1A0A0A6YYK4 115 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 ZNF497Q6ZNH5 498 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 PRIMA1Q86XR5 153 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 CCL17Q92583 94 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 FGF22Q9HCT0 170 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 CCL3P10147 92 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 IGFBP2P18065 325 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 SEC61GP60059 68 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 H0YJW9 148 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 SNAI2O43623 268 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 CEACAM5P06731 702 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 C9orf139Q6ZV77 190 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 MUSTN1Q8IVN3 82 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 WNT2BQ93097 391 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 GLRXP35754 106 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 HERVK_113P63121 156 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 LINC01620Q4KN68 170 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 TRPT1Q86TN4 253 aaKnown RBP4□□□□□ -1.77
CSMD3-201ENST00000297405 WFDC8Q8IUA0 241 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 RASL10BQ96S79 203 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 ZNF83P51522 516 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 GAS1P54826 345 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 NMSQ5H8A3 153 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 EFEMP2O95967 443 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 CD69Q07108 199 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 PRR30Q53SZ7 412 aaPredicted RBP4□□□□□ -1.77
CSMD3-201ENST00000297405 FAM104BQ5XKR9 115 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 ZFP2Q6ZN57 461 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 SCARF2Q96GP6 870 aaPredicted RBP4□□□□□ -1.77
CSMD3-201ENST00000297405 JMJD8Q96S16 334 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 PLA2G3Q9NZ20 509 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 TMEM167AQ8TBQ9 72 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 PSG8Q9UQ74 426 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 U3KQE9 123 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 PROB1E7EW31 1015 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 PFN1P07737 140 aaKnown RBP4□□□□□ -1.77
CSMD3-201ENST00000297405 GFRA1P56159 465 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 C11orf44Q8N8P7 122 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 IGKV1D-42A0A075B6H8 117 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 SPTY2D1-AS1A0A0U1RR47 76 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 IGLC7A0M8Q6 106 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 LINC00158P58513 81 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 LINC01590Q5TEZ4 76 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 LCNL1Q6ZST4 164 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 C3orf22Q8N5N4 141 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 MSGN1A6NI15 193 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 RPL36AP83881 106 aaKnown RBP4□□□□□ -1.77
CSMD3-201ENST00000297405 C17orf99Q6UX52 265 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 Q6ZUT4 128 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 RPP25LQ8N5L8 163 aaKnown RBP4□□□□□ -1.77
CSMD3-201ENST00000297405 RPL36ALQ969Q0 106 aaKnown RBP4□□□□□ -1.77
CSMD3-201ENST00000297405 SHISA4Q96DD7 197 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 PRR33A8MZF0 331 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 HCRTO43612 131 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 CRYGSP22914 178 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 EIF4EBP2Q13542 120 aaPredicted RBP4□□□□□ -1.77
CSMD3-201ENST00000297405 ZIC4Q8N9L1 334 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 PSMB8P28062 276 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 CTGFP29279 349 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 LINC00696Q6ZRV3 163 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 Q8N8P6 123 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 C11orf52Q96A22 123 aa4□□□□□ -1.77
CSMD3-201ENST00000297405 SS18Q15532 418 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 REPIN1Q9BWE0 567 aaKnown RBP3.99□□□□□ -1.77
CSMD3-201ENST00000297405 ADARB2-AS1A8MUL3 147 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 ELNP15502 786 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 SPATA12Q7Z6I5 190 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 YPEL4Q96NS1 127 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 K7ESM1 405 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 C1QTNF5Q9BXJ0 243 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 LOC102723996A0A087X1L8 192 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 CCL3L1P16619 93 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 ECSCRQ19T08 205 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 LCN12Q6JVE5 192 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 LINC01465Q8N7H1 131 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 NBL1P41271 181 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 LIME1Q9H400 295 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 A0A0U1RQV1 116 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 hDV102S1A0JD36 115 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 PRSS29PA6NIE9 313 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 SHISA8B8ZZ34 492 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 CFHR2P36980 270 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 C8orf44Q96CB5 159 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 GTSCR1Q86UQ5 136 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 PHF7Q9BWX1 381 aaPredicted RBP3.99□□□□□ -1.77
CSMD3-201ENST00000297405 CHCHD2Q9Y6H1 151 aaPredicted RBP3.99□□□□□ -1.77
CSMD3-201ENST00000297405 C1orf195Q5TG92 126 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 C9orf47Q6ZRZ4 202 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 C6orf226Q5I0X4 101 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 USMG5Q96IX5 58 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 SMIM2Q9BVW6 85 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 HTN1P15515 57 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 C12orf74Q32Q52 190 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 CBLN3Q6UW01 205 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 Q6ZWC4 215 aa3.99□□□□□ -1.77
CSMD3-201ENST00000297405 FAM236DA0A1B0GTK5 79 aa3.98□□□□□ -1.77
CSMD3-201ENST00000297405 CGB1A6NKQ9 187 aa3.98□□□□□ -1.77
CSMD3-201ENST00000297405 C16orf97H3BN30 126 aa3.98□□□□□ -1.77
CSMD3-201ENST00000297405 CD7P09564 240 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms