RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 LCNL1Q6ZST4 164 aa11.5□□□□□ -0.57
COL1A2-201ENST00000297268 SHANK2-AS3Q9BTD1 123 aa11.5□□□□□ -0.57
COL1A2-201ENST00000297268 CSTL1Q9H114 145 aa11.5□□□□□ -0.57
COL1A2-201ENST00000297268 TRAV41A0A0B4J266 112 aa11.5□□□□□ -0.57
COL1A2-201ENST00000297268 IGHV1-24A0A0C4DH33 117 aa11.5□□□□□ -0.57
COL1A2-201ENST00000297268 LMO1P25800 156 aa11.5□□□□□ -0.57
COL1A2-201ENST00000297268 PLEKHB2Q96CS7 222 aa11.5□□□□□ -0.57
COL1A2-201ENST00000297268 C9orf118A6NHY6 69 aa11.5□□□□□ -0.57
COL1A2-201ENST00000297268 ITGB1BP1O14713 200 aa11.5□□□□□ -0.57
COL1A2-201ENST00000297268 C5orf64Q2M2E5 130 aa11.5□□□□□ -0.57
COL1A2-201ENST00000297268 NDPQ00604 133 aa11.5□□□□□ -0.57
COL1A2-201ENST00000297268 RSPO1Q2MKA7 263 aaPredicted RBP11.5□□□□□ -0.57
COL1A2-201ENST00000297268 ZNF562Q6V9R5 426 aa11.5□□□□□ -0.57
COL1A2-201ENST00000297268 TMEM249Q2WGJ8 235 aa11.49□□□□□ -0.57
COL1A2-201ENST00000297268 CFAP161Q6P656 301 aa11.49□□□□□ -0.57
COL1A2-201ENST00000297268 SSBP2P81877 361 aaPredicted RBP11.49□□□□□ -0.57
COL1A2-201ENST00000297268 ZNF876PQ49A33 203 aa11.49□□□□□ -0.57
COL1A2-201ENST00000297268 C2orf82Q6UX34 121 aa11.49□□□□□ -0.57
COL1A2-201ENST00000297268 DOCK11Q5JSL3 2073 aa11.49□□□□□ -0.57
COL1A2-201ENST00000297268 VMO1Q7Z5L0 202 aa11.49□□□□□ -0.57
COL1A2-201ENST00000297268 TMEM75Q8N9X5 138 aa11.49□□□□□ -0.57
COL1A2-201ENST00000297268 VCYO14598 125 aa11.49□□□□□ -0.57
COL1A2-201ENST00000297268 MMP23AO75900 390 aa11.49□□□□□ -0.57
COL1A2-201ENST00000297268 FAM231DQ6ZW35 169 aa11.49□□□□□ -0.57
COL1A2-201ENST00000297268 PEMTQ9UBM1 199 aa11.49□□□□□ -0.57
COL1A2-201ENST00000297268 ERCC8Q13216 396 aa11.48□□□□□ -0.57
COL1A2-201ENST00000297268 C9orf139Q6ZV77 190 aa11.48□□□□□ -0.57
COL1A2-201ENST00000297268 RCHY1Q96PM5 261 aa11.48□□□□□ -0.57
COL1A2-201ENST00000297268 SRRM4A7MD48 611 aaKnown RBP11.48□□□□□ -0.57
COL1A2-201ENST00000297268 WDR81Q562E7 1941 aa11.48□□□□□ -0.57
COL1A2-201ENST00000297268 LYPD2Q6UXB3 125 aa11.48□□□□□ -0.57
COL1A2-201ENST00000297268 FAM104BQ5XKR9 115 aa11.48□□□□□ -0.57
COL1A2-201ENST00000297268 MORN3Q6PF18 240 aaPredicted RBP11.48□□□□□ -0.57
COL1A2-201ENST00000297268 AKAP6Q13023 2319 aa11.47□□□□□ -0.57
COL1A2-201ENST00000297268 C1orf122Q6ZSJ8 110 aa11.47□□□□□ -0.57
COL1A2-201ENST00000297268 C8orf49Q96NF6 230 aa11.47□□□□□ -0.57
COL1A2-201ENST00000297268 NDUFA4L2Q9NRX3 87 aa11.47□□□□□ -0.57
COL1A2-201ENST00000297268 PRSS57Q6UWY2 283 aa11.47□□□□□ -0.57
COL1A2-201ENST00000297268 HEATR5AQ86XA9 2040 aa11.47□□□□□ -0.57
COL1A2-201ENST00000297268 COX8AP10176 69 aa11.47□□□□□ -0.57
COL1A2-201ENST00000297268 PDE6HQ13956 83 aa11.47□□□□□ -0.57
COL1A2-201ENST00000297268 WDR86Q86TI4 376 aa11.47□□□□□ -0.57
COL1A2-201ENST00000297268 LINC00477Q96M19 166 aa11.47□□□□□ -0.57
COL1A2-201ENST00000297268 CD59P13987 128 aa11.47□□□□□ -0.57
COL1A2-201ENST00000297268 EP300Q09472 2414 aaPredicted RBP11.47□□□□□ -0.57
COL1A2-201ENST00000297268 IGHV3-73A0A0B4J1V6 119 aa11.46□□□□□ -0.57
COL1A2-201ENST00000297268 K7EP13 123 aa11.46□□□□□ -0.57
COL1A2-201ENST00000297268 ASPHD1Q5U4P2 390 aa11.46□□□□□ -0.57
COL1A2-201ENST00000297268 SPACA3Q8IXA5 215 aa11.46□□□□□ -0.57
COL1A2-201ENST00000297268 MGAMO43451 1857 aa11.46□□□□□ -0.57
COL1A2-201ENST00000297268 PLXNA4Q9HCM2 1894 aa11.46□□□□□ -0.57
COL1A2-201ENST00000297268 IGLV3-1P01715 115 aa11.46□□□□□ -0.57
COL1A2-201ENST00000297268 TMEM219Q86XT9 240 aa11.46□□□□□ -0.57
COL1A2-201ENST00000297268 STHQ8IWL8 128 aa11.46□□□□□ -0.57
COL1A2-201ENST00000297268 C11orf52Q96A22 123 aa11.46□□□□□ -0.57
COL1A2-201ENST00000297268 FER1L5A0AVI2 2057 aa11.46□□□□□ -0.58
COL1A2-201ENST00000297268 PRSS46E5RG02 174 aa11.46□□□□□ -0.58
COL1A2-201ENST00000297268 COL4A6Q14031 1691 aa11.45□□□□□ -0.58
COL1A2-201ENST00000297268 C9JAW5 83 aa11.45□□□□□ -0.58
COL1A2-201ENST00000297268 K7EP34 96 aa11.45□□□□□ -0.58
COL1A2-201ENST00000297268 K7EN84 100 aa11.45□□□□□ -0.58
COL1A2-201ENST00000297268 PF4P02776 101 aa11.45□□□□□ -0.58
COL1A2-201ENST00000297268 TSSC4Q9Y5U2 329 aaPredicted RBP11.45□□□□□ -0.58
COL1A2-201ENST00000297268 NLRC5Q86WI3 1866 aa11.45□□□□□ -0.58
COL1A2-201ENST00000297268 BVES-AS1Q5T3Y7 98 aa11.45□□□□□ -0.58
COL1A2-201ENST00000297268 MINOS1Q5TGZ0 78 aa11.45□□□□□ -0.58
COL1A2-201ENST00000297268 PROK2Q9HC23 129 aa11.45□□□□□ -0.58
COL1A2-201ENST00000297268 MINOS1-NBL1R4GNA1 71 aa11.45□□□□□ -0.58
COL1A2-201ENST00000297268 TRBV7-1A0A0A6YYK4 115 aa11.44□□□□□ -0.58
COL1A2-201ENST00000297268 ADARB2-AS1A8MUL3 147 aa11.44□□□□□ -0.58
COL1A2-201ENST00000297268 OOSP1A8MZH6 123 aa11.44□□□□□ -0.58
COL1A2-201ENST00000297268 ZNF503-AS2A6NEH8 195 aa11.44□□□□□ -0.58
COL1A2-201ENST00000297268 LINC00158P58513 81 aa11.44□□□□□ -0.58
COL1A2-201ENST00000297268 RNF166Q96A37 237 aaPredicted RBP11.44□□□□□ -0.58
COL1A2-201ENST00000297268 SPAG8Q99932 426 aaPredicted RBP11.44□□□□□ -0.58
COL1A2-201ENST00000297268 PLA2G2EQ9NZK7 142 aa11.44□□□□□ -0.58
COL1A2-201ENST00000297268 A0A1W2PRX2 142 aa11.44□□□□□ -0.58
COL1A2-201ENST00000297268 MBD3L4A6NDZ8 208 aaPredicted RBP11.44□□□□□ -0.58
COL1A2-201ENST00000297268 MBD3L3A6NE82 208 aaPredicted RBP11.44□□□□□ -0.58
COL1A2-201ENST00000297268 MBD3L5A6NJ08 208 aaPredicted RBP11.44□□□□□ -0.58
COL1A2-201ENST00000297268 MBD3L2Q8NHZ7 208 aaPredicted RBP11.44□□□□□ -0.58
COL1A2-201ENST00000297268 TRBV19A0A075B6N1 114 aa11.43□□□□□ -0.58
COL1A2-201ENST00000297268 MALP21145 153 aa11.43□□□□□ -0.58
COL1A2-201ENST00000297268 VWC2Q2TAL6 325 aa11.43□□□□□ -0.58
COL1A2-201ENST00000297268 MRPL51Q4U2R6 128 aaKnown RBP11.43□□□□□ -0.58
COL1A2-201ENST00000297268 KIR2DL5BA0A0G2JN68 375 aa11.43□□□□□ -0.58
COL1A2-201ENST00000297268 KIR2DL5BA0A0G2JPC4 375 aa11.43□□□□□ -0.58
COL1A2-201ENST00000297268 KIR2DL5AQ8N109 375 aa11.43□□□□□ -0.58
COL1A2-201ENST00000297268 A0A087WWL8 130 aa11.43□□□□□ -0.58
COL1A2-201ENST00000297268 LGALS9BQ3B8N2 356 aa11.43□□□□□ -0.58
COL1A2-201ENST00000297268 LGALS9CQ6DKI2 356 aa11.43□□□□□ -0.58
COL1A2-201ENST00000297268 SRSF8Q9BRL6 282 aaKnown RBP11.43□□□□□ -0.58
COL1A2-201ENST00000297268 PLXND1Q9Y4D7 1925 aa11.43□□□□□ -0.58
COL1A2-201ENST00000297268 FCN3O75636 299 aa11.43□□□□□ -0.58
COL1A2-201ENST00000297268 IGHG3P01860 377 aa11.43□□□□□ -0.58
COL1A2-201ENST00000297268 Q6ZR03 302 aa11.43□□□□□ -0.58
COL1A2-201ENST00000297268 FNDC1Q4ZHG4 1894 aaPredicted RBP11.43□□□□□ -0.58
COL1A2-201ENST00000297268 SPTBN2O15020 2390 aa11.42□□□□□ -0.58
COL1A2-201ENST00000297268 TRAV8-3A0A0A6YYJ7 113 aa11.42□□□□□ -0.58
COL1A2-201ENST00000297268 SLC25A20O43772 301 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms