RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 PRR20CP86479 221 aa12.69□□□□□ -0.38
USP43-201ENST00000285199 PRR20DP86480 221 aa12.69□□□□□ -0.38
USP43-201ENST00000285199 PRR20BP86481 221 aa12.69□□□□□ -0.38
USP43-201ENST00000285199 PRR20AP86496 221 aa12.69□□□□□ -0.38
USP43-201ENST00000285199 ETDBQ3ZM63 59 aa12.69□□□□□ -0.38
USP43-201ENST00000285199 DGAT2L7PQ6IED9 249 aa12.69□□□□□ -0.38
USP43-201ENST00000285199 WISP2O76076 250 aa12.68□□□□□ -0.38
USP43-201ENST00000285199 LYRM7Q5U5X0 104 aa12.68□□□□□ -0.38
USP43-201ENST00000285199 SMIM27A0A1W2PRY6 76 aa12.68□□□□□ -0.38
USP43-201ENST00000285199 CLEC19AQ6UXS0 136 aa12.68□□□□□ -0.38
USP43-201ENST00000285199 RAXQ9Y2V3 346 aa12.68□□□□□ -0.38
USP43-201ENST00000285199 RNF114Q9Y508 228 aa12.68□□□□□ -0.38
USP43-201ENST00000285199 K7ERJ3 54 aa12.68□□□□□ -0.38
USP43-201ENST00000285199 CD300EQ496F6 205 aaPredicted RBP12.68□□□□□ -0.38
USP43-201ENST00000285199 AMTNQ6UX39 209 aa12.68□□□□□ -0.38
USP43-201ENST00000285199 GAFA1Q96PS6 74 aa12.68□□□□□ -0.38
USP43-201ENST00000285199 TTTY13Q9BZ97 58 aa12.68□□□□□ -0.38
USP43-201ENST00000285199 IGHV3-64A0A075B6Q5 118 aa12.67□□□□□ -0.38
USP43-201ENST00000285199 IGKV1OR2-108A0A075B7D4 117 aa12.67□□□□□ -0.38
USP43-201ENST00000285199 PF4V1P10720 104 aa12.67□□□□□ -0.38
USP43-201ENST00000285199 LY6EQ16553 131 aa12.67□□□□□ -0.38
USP43-201ENST00000285199 C1orf162Q8NEQ5 155 aaPredicted RBP12.67□□□□□ -0.38
USP43-201ENST00000285199 Q8TCH9 128 aa12.67□□□□□ -0.38
USP43-201ENST00000285199 C11orf52Q96A22 123 aa12.67□□□□□ -0.38
USP43-201ENST00000285199 C17orf77Q96MU5 243 aa12.67□□□□□ -0.38
USP43-201ENST00000285199 TMEM238LA0A1B0GVL6 79 aa12.67□□□□□ -0.38
USP43-201ENST00000285199 A6NJY4 79 aa12.67□□□□□ -0.38
USP43-201ENST00000285199 ITGB1BP1O14713 200 aa12.67□□□□□ -0.38
USP43-201ENST00000285199 OR4X2Q8NGF9 303 aa12.67□□□□□ -0.38
USP43-201ENST00000285199 IGLC7A0M8Q6 106 aa12.67□□□□□ -0.38
USP43-201ENST00000285199 C11orf53Q8IXP5 236 aa12.67□□□□□ -0.38
USP43-201ENST00000285199 LOC105371242A0A075B767 164 aa12.66□□□□□ -0.38
USP43-201ENST00000285199 FABP5P3A8MUU1 101 aa12.66□□□□□ -0.38
USP43-201ENST00000285199 K7EP13 123 aa12.66□□□□□ -0.38
USP43-201ENST00000285199 C17orf58Q2M2W7 97 aa12.66□□□□□ -0.38
USP43-201ENST00000285199 C8orf49Q96NF6 230 aa12.66□□□□□ -0.38
USP43-201ENST00000285199 METTL26Q96S19 204 aa12.66□□□□□ -0.38
USP43-201ENST00000285199 DPM3Q9P2X0 92 aa12.66□□□□□ -0.38
USP43-201ENST00000285199 SLC25A15Q9Y619 301 aa12.66□□□□□ -0.38
USP43-201ENST00000285199 MRPL52Q86TS9 123 aaKnown RBP12.66□□□□□ -0.38
USP43-201ENST00000285199 TMEM75Q8N9X5 138 aa12.66□□□□□ -0.38
USP43-201ENST00000285199 CCDC168Q8NDH2 2452 aa12.66□□□□□ -0.38
USP43-201ENST00000285199 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.66□□□□□ -0.38
USP43-201ENST00000285199 IGHV3-11P01762 117 aa12.66□□□□□ -0.38
USP43-201ENST00000285199 CCL21O00585 134 aa12.66□□□□□ -0.38
USP43-201ENST00000285199 DPM2O94777 84 aa12.66□□□□□ -0.38
USP43-201ENST00000285199 IGKCP01834 107 aa12.66□□□□□ -0.38
USP43-201ENST00000285199 RPS20P60866 119 aaKnown RBP12.66□□□□□ -0.38
USP43-201ENST00000285199 TMEM167AQ8TBQ9 72 aa12.66□□□□□ -0.38
USP43-201ENST00000285199 ZNF256Q9Y2P7 627 aaPredicted RBP12.66□□□□□ -0.38
USP43-201ENST00000285199 SP9P0CG40 484 aa12.65□□□□□ -0.38
USP43-201ENST00000285199 ESDP10768 282 aa12.65□□□□□ -0.38
USP43-201ENST00000285199 TMPRSS3P57727 454 aa12.65□□□□□ -0.38
USP43-201ENST00000285199 MEF2CQ06413 473 aaPredicted RBP12.65□□□□□ -0.38
USP43-201ENST00000285199 KLRD1Q13241 179 aa12.65□□□□□ -0.38
USP43-201ENST00000285199 Q86TA4 180 aa12.65□□□□□ -0.38
USP43-201ENST00000285199 MDS2Q8NDY4 140 aa12.65□□□□□ -0.38
USP43-201ENST00000285199 TP53TG3Q9ULZ0 132 aa12.65□□□□□ -0.38
USP43-201ENST00000285199 C2orf16Q68DN1 1984 aa12.65□□□□□ -0.38
USP43-201ENST00000285199 MUC6Q6W4X9 2439 aa12.65□□□□□ -0.38
USP43-201ENST00000285199 CDX4O14627 284 aaPredicted RBP12.65□□□□□ -0.38
USP43-201ENST00000285199 BRWD1-AS2P59051 145 aa12.65□□□□□ -0.38
USP43-201ENST00000285199 ZNF474Q6S9Z5 364 aaPredicted RBP12.65□□□□□ -0.38
USP43-201ENST00000285199 ADAMTSL5Q6ZMM2 481 aa12.65□□□□□ -0.38
USP43-201ENST00000285199 TMEM158Q8WZ71 300 aa12.65□□□□□ -0.38
USP43-201ENST00000285199 NCOR2Q9Y618 2525 aa12.65□□□□□ -0.38
USP43-201ENST00000285199 SRD5A1P18405 259 aa12.65□□□□□ -0.38
USP43-201ENST00000285199 RASL11AQ6T310 242 aa12.65□□□□□ -0.38
USP43-201ENST00000285199 PCP2Q8IVA1 136 aa12.64□□□□□ -0.39
USP43-201ENST00000285199 OR10J6PQ8NGY7 276 aa12.64□□□□□ -0.39
USP43-201ENST00000285199 HCFC1P51610 2035 aa12.64□□□□□ -0.39
USP43-201ENST00000285199 VPS13AQ96RL7 3174 aa12.64□□□□□ -0.39
USP43-201ENST00000285199 SH2D1AO60880 128 aa12.64□□□□□ -0.39
USP43-201ENST00000285199 PROP1O75360 226 aa12.64□□□□□ -0.39
USP43-201ENST00000285199 TOMM40O96008 361 aa12.64□□□□□ -0.39
USP43-201ENST00000285199 RNF138Q8WVD3 245 aa12.64□□□□□ -0.39
USP43-201ENST00000285199 TRAV40A0A0B4J280 105 aa12.64□□□□□ -0.39
USP43-201ENST00000285199 PAX2Q02962 417 aa12.64□□□□□ -0.39
USP43-201ENST00000285199 ATP5LO75964 103 aa12.63□□□□□ -0.39
USP43-201ENST00000285199 GAGE13Q4V321 117 aa12.63□□□□□ -0.39
USP43-201ENST00000285199 Q6ZSR3 168 aa12.63□□□□□ -0.39
USP43-201ENST00000285199 KMT2EQ8IZD2 1858 aa12.63□□□□□ -0.39
USP43-201ENST00000285199 SMAD7O15105 426 aaKnown RBP12.63□□□□□ -0.39
USP43-201ENST00000285199 SPRY2O43597 315 aa12.63□□□□□ -0.39
USP43-201ENST00000285199 ERCC8Q13216 396 aa12.63□□□□□ -0.39
USP43-201ENST00000285199 ABCA2Q9BZC7 2435 aa12.63□□□□□ -0.39
USP43-201ENST00000285199 Q6AWC8 147 aa12.63□□□□□ -0.39
USP43-201ENST00000285199 CCDC144NLQ6NUI1 221 aa12.63□□□□□ -0.39
USP43-201ENST00000285199 NDUFA4L2Q9NRX3 87 aa12.63□□□□□ -0.39
USP43-201ENST00000285199 OR5A1Q8NGJ0 315 aa12.62□□□□□ -0.39
USP43-201ENST00000285199 FXYD5Q96DB9 178 aa12.62□□□□□ -0.39
USP43-201ENST00000285199 PLSCR4Q9NRQ2 329 aa12.62□□□□□ -0.39
USP43-201ENST00000285199 DKK2Q9UBU2 259 aa12.62□□□□□ -0.39
USP43-201ENST00000285199 FREM2Q5SZK8 3169 aa12.62□□□□□ -0.39
USP43-201ENST00000285199 NDPQ00604 133 aa12.62□□□□□ -0.39
USP43-201ENST00000285199 IGHV2-70DA0A0C4DH43 119 aa12.62□□□□□ -0.39
USP43-201ENST00000285199 IGHV1-8P0DP01 117 aa12.62□□□□□ -0.39
USP43-201ENST00000285199 LGALS3P17931 250 aaKnown RBP12.62□□□□□ -0.39
USP43-201ENST00000285199 ARPC1AQ92747 370 aa12.62□□□□□ -0.39
USP43-201ENST00000285199 SIGLEC9Q9Y336 463 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms