RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 EPDR1Q9UM22 224 aa7.34□□□□□ -1.23
PDGFC-201ENST00000274071 PROCRQ9UNN8 238 aa7.34□□□□□ -1.23
PDGFC-201ENST00000274071 SP1P08047 785 aa7.34□□□□□ -1.23
PDGFC-201ENST00000274071 C6orf15Q6UXA7 325 aaPredicted RBP7.34□□□□□ -1.23
PDGFC-201ENST00000274071 BAALCQ8WXS3 180 aa7.34□□□□□ -1.23
PDGFC-201ENST00000274071 ZNF492Q9P255 531 aa7.34□□□□□ -1.23
PDGFC-201ENST00000274071 F5H768 121 aa7.33□□□□□ -1.24
PDGFC-201ENST00000274071 HLA-DRB4P13762 266 aa7.33□□□□□ -1.24
PDGFC-201ENST00000274071 TNFRSF1AP19438 455 aa7.33□□□□□ -1.24
PDGFC-201ENST00000274071 MYCNOSP40205 109 aa7.33□□□□□ -1.24
PDGFC-201ENST00000274071 ZNF493Q6ZR52 646 aa7.33□□□□□ -1.24
PDGFC-201ENST00000274071 SLC25A48Q6ZT89 311 aaKnown RBP7.33□□□□□ -1.24
PDGFC-201ENST00000274071 C15orf53Q8NAA6 179 aa7.33□□□□□ -1.24
PDGFC-201ENST00000274071 FSCN3Q9NQT6 498 aa7.33□□□□□ -1.24
PDGFC-201ENST00000274071 HLA-DRB4X5D2U9 266 aa7.33□□□□□ -1.24
PDGFC-201ENST00000274071 J3KT08 172 aa7.33□□□□□ -1.24
PDGFC-201ENST00000274071 DUSP14O95147 198 aaKnown RBP7.33□□□□□ -1.24
PDGFC-201ENST00000274071 SCGB1C2P0DMR2 95 aa7.33□□□□□ -1.24
PDGFC-201ENST00000274071 GUSBP11Q6P575 273 aa7.33□□□□□ -1.24
PDGFC-201ENST00000274071 UCN2Q96RP3 112 aa7.33□□□□□ -1.24
PDGFC-201ENST00000274071 PAXXQ9BUH6 204 aa7.33□□□□□ -1.24
PDGFC-201ENST00000274071 FCGR3BO75015 233 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 TRGV9Q99603 122 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 PRADC1Q9BSG0 188 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 OR2H1Q9GZK4 316 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 PROK2Q9HC23 129 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 EML6Q6ZMW3 1958 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 OR2H2O95918 312 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 PRSS1P07477 247 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 RIGQ13278 110 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 DEFB123Q8N688 67 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 GATD1Q8NB37 220 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 PTPRBP23467 1997 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 TRGV8A0A0C4DH27 118 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 IGHV3-20A0A0C4DH32 117 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 FOXF2Q12947 444 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 MLANAQ16655 118 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 PMS2CLQ68D20 193 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 SAP25Q8TEE9 199 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 EDA2RQ9HAV5 297 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 CALYQ9NYX4 217 aa7.32□□□□□ -1.24
PDGFC-201ENST00000274071 NBEAQ8NFP9 2946 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 TRAV40A0A0B4J280 105 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 PGPA6NDG6 321 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 C12orf77C9JDV5 145 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 NDUFA7O95182 113 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 IGLC6P0CF74 106 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 HERVK_113P63121 156 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 OR13A1Q8NGR1 328 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 MAFAQ8NHW3 353 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-201ENST00000274071 FXYD5Q96DB9 178 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 TMEM160Q9NX00 188 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 LY6G6EA0A0G2JKS1 128 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 C15orf65H3BRN8 121 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 PROP1O75360 226 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 DPM2O94777 84 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 NPYP01303 97 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 PDPNQ86YL7 162 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 OR13C6PQ8NH95 151 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 KLK5Q9Y337 293 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-201ENST00000274071 U3KQA8 63 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 U3KQK5 164 aa7.31□□□□□ -1.24
PDGFC-201ENST00000274071 FRYQ5TBA9 3013 aa7.3□□□□□ -1.24
PDGFC-201ENST00000274071 ZDBF2Q9HCK1 2354 aa7.3□□□□□ -1.24
PDGFC-201ENST00000274071 A0A0J9YW62 118 aa7.3□□□□□ -1.24
PDGFC-201ENST00000274071 FAM57AQ8TBR7 257 aa7.3□□□□□ -1.24
PDGFC-201ENST00000274071 DUX5Q96PT3 197 aa7.3□□□□□ -1.24
PDGFC-201ENST00000274071 IGHV5-10-1A0A0J9YXX1 117 aa7.3□□□□□ -1.24
PDGFC-201ENST00000274071 A0A1B0GX51 115 aa7.3□□□□□ -1.24
PDGFC-201ENST00000274071 DNPH1O43598 174 aa7.3□□□□□ -1.24
PDGFC-201ENST00000274071 FOXC1Q12948 553 aa7.3□□□□□ -1.24
PDGFC-201ENST00000274071 Q71RC1 249 aaPredicted RBP7.3□□□□□ -1.24
PDGFC-201ENST00000274071 ORMDL3Q8N138 153 aa7.3□□□□□ -1.24
PDGFC-201ENST00000274071 Q8N1Y9 231 aa7.3□□□□□ -1.24
PDGFC-201ENST00000274071 SRSF12Q8WXF0 261 aaKnown RBP7.3□□□□□ -1.24
PDGFC-201ENST00000274071 DEFB108AA8MXU0 73 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 M0R2P5 195 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 SLC25A20O43772 301 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 SCRG1O75711 98 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 NGFP01138 241 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 UBE2D1P51668 147 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 EMP1P54849 157 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 AMN1Q8IY45 258 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 FOXC2Q99958 501 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 PRDM14Q9GZV8 571 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 LINC01619G3V211 115 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 SRSF9Q13242 221 aaKnown RBP eCLIP7.29□□□□□ -1.24
PDGFC-201ENST00000274071 HES1Q14469 280 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 FMC1Q96HJ9 113 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 IGLV3-12A0A075B6K2 115 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 IGHV3-43A0A0B4J1X8 118 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 IGHG3P01860 377 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 CD7P09564 240 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 IGHV3-43DP0DP04 118 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 HSPE1P61604 102 aaKnown RBP7.29□□□□□ -1.24
PDGFC-201ENST00000274071 TWIST1Q15672 202 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 C9orf153Q5TBE3 101 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 LYRM7Q5U5X0 104 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 OR11H6Q8NGC7 330 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 TTC28Q96AY4 2481 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 409 ms