RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 NABP1Q96AH0 204 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 IGHV3-72A0A0B4J1Y9 119 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 F5H768 121 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 FAM166AQ6J272 317 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 PRSS57Q6UWY2 283 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 SAP25Q8TEE9 199 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 NPFFO15130 113 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 SUMO2P61956 95 aaKnown RBP4.72□□□□□ -1.65
VCAN-201ENST00000265077 LINC00312Q9Y6C7 94 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 FOXI3A8MTJ6 420 aaPredicted RBP4.72□□□□□ -1.65
VCAN-201ENST00000265077 EFNB3Q15768 340 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 GTSCR1Q86UQ5 136 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 PTPRSQ13332 1948 aa4.72□□□□□ -1.65
VCAN-201ENST00000265077 A0A1W2PPI3 338 aa4.71□□□□□ -1.65
VCAN-201ENST00000265077 C17orf98A8MV24 154 aa4.71□□□□□ -1.65
VCAN-201ENST00000265077 LYPD3O95274 346 aa4.71□□□□□ -1.65
VCAN-201ENST00000265077 RPP25LQ8N5L8 163 aaKnown RBP4.71□□□□□ -1.65
VCAN-201ENST00000265077 TAL2Q16559 108 aa4.71□□□□□ -1.65
VCAN-201ENST00000265077 SLC50A1Q9BRV3 221 aa4.71□□□□□ -1.65
VCAN-201ENST00000265077 C21orf62Q9NYP8 219 aa4.71□□□□□ -1.65
VCAN-201ENST00000265077 IGLV3-12A0A075B6K2 115 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.71□□□□□ -1.66
VCAN-201ENST00000265077 ZIC3O60481 467 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 PRCDQ00LT1 54 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 ZNRF1Q8ND25 227 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 RFNGQ9Y644 331 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 IGHG4P01861 327 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 FOXI1Q12951 378 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 WFDC2Q14508 124 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 FOXA2Q9Y261 457 aaPredicted RBP4.71□□□□□ -1.66
VCAN-201ENST00000265077 FAM74A4Q5TZK3 123 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 LEAP2Q969E1 77 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 CECR9P0C854 216 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 S100A7L2Q5SY68 101 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 TEN1Q86WV5 123 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 CEND1Q8N111 149 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 NUP35Q8NFH5 326 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 ORMDL2Q53FV1 153 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 PVRIGQ6DKI7 326 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 FOXI2Q6ZQN5 318 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 DPM3Q9P2X0 92 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 COLCA1Q6ZS62 124 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 PPP1R32Q7Z5V6 425 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 WDR83OSQ9Y284 106 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 TNFRSF18Q9Y5U5 241 aa4.71□□□□□ -1.66
VCAN-201ENST00000265077 H0YJW9 148 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 CGB1A6NKQ9 187 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 M0R381 172 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 NPC2P61916 151 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 ZIC4Q8N9L1 334 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 MT-ATP8P03928 68 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 TRGV3P03979 118 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 ZNF883P0CG24 379 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 IGKV1-9A0A0C4DH69 117 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 TCRBV4S1A1TA0A5B7 111 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 F2Z2F3 143 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 LGALS1P09382 135 aaKnown RBP4.7□□□□□ -1.66
VCAN-201ENST00000265077 RNASE1P07998 156 aaKnown RBP4.7□□□□□ -1.66
VCAN-201ENST00000265077 CD69Q07108 199 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 ZC2HC1BQ5TFG8 222 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 PEAR1Q5VY43 1037 aaPredicted RBP4.7□□□□□ -1.66
VCAN-201ENST00000265077 CT83Q5H943 113 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 RCHY1Q96PM5 261 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 PRADC1Q9BSG0 188 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 SRSF1Q07955 248 aaKnown RBP eCLIP4.7□□□□□ -1.66
VCAN-201ENST00000265077 MRPL20Q9BYC9 149 aaKnown RBP4.7□□□□□ -1.66
VCAN-201ENST00000265077 TRAV12-3A0A0B4J271 114 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 IGHV3-48P01763 117 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 SHISA2Q6UWI4 295 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 UPK2O00526 184 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 IFI27P40305 119 aaPredicted RBP4.7□□□□□ -1.66
VCAN-201ENST00000265077 SPANXB1Q9NS25 103 aaPredicted RBP4.7□□□□□ -1.66
VCAN-201ENST00000265077 TMEM74BQ9NUR3 256 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 IGLL5B9A064 214 aa4.7□□□□□ -1.66
VCAN-201ENST00000265077 H3BTX0 84 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 GATA2P23769 480 aaPredicted RBP4.69□□□□□ -1.66
VCAN-201ENST00000265077 CNTFRP26992 372 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 TMEM14EPQ6UXP3 125 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 PRR7Q8TB68 274 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 SCRT2Q9NQ03 307 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 DUTP33316 252 aaKnown RBP4.69□□□□□ -1.66
VCAN-201ENST00000265077 IGKV1D-8A0A087WSZ0 117 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 LYZL4Q96KX0 146 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 TRGV9Q99603 122 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 MCRIP2Q9BUT9 160 aaKnown RBP4.69□□□□□ -1.66
VCAN-201ENST00000265077 Q6ZS49 121 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 A0A1W2PR77 199 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 SMIM9A6NGZ8 99 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 SLC25A20O43772 301 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 NUPR1O60356 82 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 TRBV6-6A0A0A6YYG2 114 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 SAA2P0DJI9 122 aaPredicted RBP4.69□□□□□ -1.66
VCAN-201ENST00000265077 LAGE3Q14657 143 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 CSDC2Q9Y534 153 aaKnown RBP4.69□□□□□ -1.66
VCAN-201ENST00000265077 IGKV1D-43A0A0B4J1Z2 117 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 LCNL1Q6ZST4 164 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 SPATA25Q9BR10 227 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 IGKV1D-13A0A0B4J2D9 117 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 ATOX1O00244 68 aa4.69□□□□□ -1.66
VCAN-201ENST00000265077 IGKV1-13P0DP09 117 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms