RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 RPL35P42766 123 aaKnown RBP17.46■□□□□ 0.39
SMARCB1-201ENST00000263121 TM4SF20Q53R12 229 aa17.46■□□□□ 0.39
SMARCB1-201ENST00000263121 REC114Q7Z4M0 266 aa17.46■□□□□ 0.39
SMARCB1-201ENST00000263121 HIST1H2BAQ96A08 127 aa17.46■□□□□ 0.39
SMARCB1-201ENST00000263121 UFC1Q9Y3C8 167 aa17.46■□□□□ 0.39
SMARCB1-201ENST00000263121 HOXD3P31249 432 aaPredicted RBP17.45■□□□□ 0.38
SMARCB1-201ENST00000263121 GNG5P63218 68 aa17.45■□□□□ 0.38
SMARCB1-201ENST00000263121 RHEBQ15382 184 aa17.45■□□□□ 0.38
SMARCB1-201ENST00000263121 A0A1W2PS18 150 aa17.45■□□□□ 0.38
SMARCB1-201ENST00000263121 C7orf77A4D0Y5 90 aa17.45■□□□□ 0.38
SMARCB1-201ENST00000263121 LGALS9O00182 355 aa17.45■□□□□ 0.38
SMARCB1-201ENST00000263121 CD28P10747 220 aa17.45■□□□□ 0.38
SMARCB1-201ENST00000263121 KHDC1LQ5JSQ8 128 aa17.45■□□□□ 0.38
SMARCB1-201ENST00000263121 NF1P21359 2839 aa17.45■□□□□ 0.38
SMARCB1-201ENST00000263121 HELTA6NFD8 242 aa17.44■□□□□ 0.38
SMARCB1-201ENST00000263121 A8MWP6 167 aa17.44■□□□□ 0.38
SMARCB1-201ENST00000263121 C9JCJ5 164 aa17.44■□□□□ 0.38
SMARCB1-201ENST00000263121 RPL23P62829 140 aaKnown RBP17.44■□□□□ 0.38
SMARCB1-201ENST00000263121 PSG9Q00887 426 aa17.44■□□□□ 0.38
SMARCB1-201ENST00000263121 DEFB136Q30KP8 78 aa17.44■□□□□ 0.38
SMARCB1-201ENST00000263121 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.44■□□□□ 0.38
SMARCB1-201ENST00000263121 GRAMD2BQ96HH9 432 aa17.44■□□□□ 0.38
SMARCB1-201ENST00000263121 RNF114Q9Y508 228 aa17.44■□□□□ 0.38
SMARCB1-201ENST00000263121 ZNF785A8K8V0 405 aa17.43■□□□□ 0.38
SMARCB1-201ENST00000263121 AKR1C3P42330 323 aa17.43■□□□□ 0.38
SMARCB1-201ENST00000263121 PROK1P58294 105 aa17.43■□□□□ 0.38
SMARCB1-201ENST00000263121 KLHL30-AS1Q8NEE0 82 aa17.43■□□□□ 0.38
SMARCB1-201ENST00000263121 ATG101Q9BSB4 218 aa17.43■□□□□ 0.38
SMARCB1-201ENST00000263121 SMPXQ9UHP9 88 aa17.43■□□□□ 0.38
SMARCB1-201ENST00000263121 TMEM213A2RRL7 107 aa17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 TCRAP04437 139 aa17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 SRSF2Q01130 221 aaKnown RBP17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 C1QL4Q86Z23 238 aa17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 RHPN1-AS1Q9BWJ2 59 aa17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 RPS10P5Q9NQ39 176 aa17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 LINC01619G3V211 115 aa17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 CHEK1O14757 476 aa17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 MEOX2P50222 304 aa17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 CNN1P51911 297 aaKnown RBP17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 SYNJ2BPP57105 145 aa17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 KLF5Q13887 457 aaPredicted RBP17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 HIST2H2BDQ6DRA6 164 aa17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 LINC01551Q86U37 167 aa17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 LINC00479Q96M42 142 aa17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 AAMDCQ9H7C9 122 aa17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 ZNF331Q9NQX6 463 aaPredicted RBP17.42■□□□□ 0.38
SMARCB1-201ENST00000263121 B4DEV8 164 aa17.41■□□□□ 0.38
SMARCB1-201ENST00000263121 HAX1O00165 279 aa17.41■□□□□ 0.38
SMARCB1-201ENST00000263121 EDN2P20800 178 aa17.41■□□□□ 0.38
SMARCB1-201ENST00000263121 TAS2R60P59551 318 aa17.41■□□□□ 0.38
SMARCB1-201ENST00000263121 BTN1A1Q13410 526 aa17.41■□□□□ 0.38
SMARCB1-201ENST00000263121 ADIRFQ15847 76 aa17.41■□□□□ 0.38
SMARCB1-201ENST00000263121 OR11H1Q8NG94 326 aa17.41■□□□□ 0.38
SMARCB1-201ENST00000263121 OR1N2Q8NGR9 330 aa17.41■□□□□ 0.38
SMARCB1-201ENST00000263121 CMTM2Q8TAZ6 248 aa17.41■□□□□ 0.38
SMARCB1-201ENST00000263121 IGF2BP2-AS1Q96M15 143 aa17.41■□□□□ 0.38
SMARCB1-201ENST00000263121 KLF12Q9Y4X4 402 aa17.41■□□□□ 0.38
SMARCB1-201ENST00000263121 LY96Q9Y6Y9 160 aa17.41■□□□□ 0.38
SMARCB1-201ENST00000263121 PGPEP1LA6NFU8 196 aa17.4■□□□□ 0.38
SMARCB1-201ENST00000263121 CENPWQ5EE01 88 aa17.4■□□□□ 0.38
SMARCB1-201ENST00000263121 C11orf44Q8N8P7 122 aa17.4■□□□□ 0.38
SMARCB1-201ENST00000263121 CITED2Q99967 270 aaPredicted RBP17.4■□□□□ 0.38
SMARCB1-201ENST00000263121 RPH3ALQ9UNE2 315 aa17.4■□□□□ 0.38
SMARCB1-201ENST00000263121 DNASE2O00115 360 aaPredicted RBP17.39■□□□□ 0.37
SMARCB1-201ENST00000263121 SLURP1P55000 103 aa17.39■□□□□ 0.37
SMARCB1-201ENST00000263121 TMEM183BQ1AE95 376 aa17.39■□□□□ 0.37
SMARCB1-201ENST00000263121 C8orf86Q6ZUL3 223 aa17.39■□□□□ 0.37
SMARCB1-201ENST00000263121 SLC50A1Q9BRV3 221 aa17.39■□□□□ 0.37
SMARCB1-201ENST00000263121 TSSC4Q9Y5U2 329 aaPredicted RBP17.39■□□□□ 0.37
SMARCB1-201ENST00000263121 F8P00451 2351 aa17.39■□□□□ 0.37
SMARCB1-201ENST00000263121 A0A087WWC5 75 aa17.39■□□□□ 0.37
SMARCB1-201ENST00000263121 M0R3E3 92 aa17.39■□□□□ 0.37
SMARCB1-201ENST00000263121 GNG4P50150 75 aa17.39■□□□□ 0.37
SMARCB1-201ENST00000263121 ARL6IP6Q8N6S5 226 aa17.39■□□□□ 0.37
SMARCB1-201ENST00000263121 OCC1Q8TAD7 63 aa17.39■□□□□ 0.37
SMARCB1-201ENST00000263121 DPF1Q92782 380 aa17.39■□□□□ 0.37
SMARCB1-201ENST00000263121 SETXQ7Z333 2677 aaKnown RBP17.38■□□□□ 0.37
SMARCB1-201ENST00000263121 TRAV34A0A0B4J273 112 aa17.38■□□□□ 0.37
SMARCB1-201ENST00000263121 ISLRO14498 428 aa17.38■□□□□ 0.37
SMARCB1-201ENST00000263121 S100A9P06702 114 aaKnown RBP17.37■□□□□ 0.37
SMARCB1-201ENST00000263121 BMI1P35226 326 aa17.37■□□□□ 0.37
SMARCB1-201ENST00000263121 TMEM88Q6PEY1 159 aa17.37■□□□□ 0.37
SMARCB1-201ENST00000263121 CBLN2Q8IUK8 224 aa17.37■□□□□ 0.37
SMARCB1-201ENST00000263121 DUX3Q96PT4 197 aa17.37■□□□□ 0.37
SMARCB1-201ENST00000263121 AURKAIP1Q9NWT8 199 aaPredicted RBP17.37■□□□□ 0.37
SMARCB1-201ENST00000263121 DIRC3C9JPN6 131 aa17.36■□□□□ 0.37
SMARCB1-201ENST00000263121 TSPAN4O14817 238 aa17.36■□□□□ 0.37
SMARCB1-201ENST00000263121 GOLT1AQ6ZVE7 132 aa17.36■□□□□ 0.37
SMARCB1-201ENST00000263121 ISOC2Q96AB3 205 aa17.36■□□□□ 0.37
SMARCB1-201ENST00000263121 FMC1Q96HJ9 113 aa17.36■□□□□ 0.37
SMARCB1-201ENST00000263121 TRAV8-2A0A0B4J237 113 aa17.36■□□□□ 0.37
SMARCB1-201ENST00000263121 IGLV2-8P01709 118 aa17.36■□□□□ 0.37
SMARCB1-201ENST00000263121 HLA-DMBP28068 263 aa17.36■□□□□ 0.37
SMARCB1-201ENST00000263121 UBE2G1P62253 170 aa17.36■□□□□ 0.37
SMARCB1-201ENST00000263121 FHL3Q13643 280 aa17.36■□□□□ 0.37
SMARCB1-201ENST00000263121 IGFL4Q6B9Z1 124 aa17.36■□□□□ 0.37
SMARCB1-201ENST00000263121 RAX2Q96IS3 184 aa17.36■□□□□ 0.37
SMARCB1-201ENST00000263121 C2orf70A6NJV1 201 aa17.35■□□□□ 0.37
SMARCB1-201ENST00000263121 K7EN84 100 aa17.35■□□□□ 0.37
SMARCB1-201ENST00000263121 A0A1W2PRX2 142 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms